RNA–Protein interactions for RNA: ENST00000338193.10

PRIM1-201, Transcript of DNA primase subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIM1, Length 1,393 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-201ENST00000338193 DCBLD2Q96PD2 775 aa16.23■□□□□ 0.19
PRIM1-201ENST00000338193 TEX13AQ9BXU3 409 aaPredicted RBP16.23■□□□□ 0.19
PRIM1-201ENST00000338193 RPS6KA4O75676 772 aa16.22■□□□□ 0.19
PRIM1-201ENST00000338193 COL23A1Q86Y22 540 aaPredicted RBP16.22■□□□□ 0.19
PRIM1-201ENST00000338193 STK32BQ9NY57 414 aa16.22■□□□□ 0.19
PRIM1-201ENST00000338193 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.21■□□□□ 0.19
PRIM1-201ENST00000338193 HOXB7P09629 217 aa16.21■□□□□ 0.19
PRIM1-201ENST00000338193 EIF5P55010 431 aaKnown RBP16.21■□□□□ 0.19
PRIM1-201ENST00000338193 G2E3Q7L622 706 aa16.21■□□□□ 0.19
PRIM1-201ENST00000338193 BCL2L13Q9BXK5 485 aa16.21■□□□□ 0.19
PRIM1-201ENST00000338193 TFCP2L1Q9NZI6 479 aa16.21■□□□□ 0.19
PRIM1-201ENST00000338193 SRP68Q9UHB9 627 aaKnown RBP16.21■□□□□ 0.19
PRIM1-201ENST00000338193 ZNF330Q9Y3S2 320 aaPredicted RBP16.21■□□□□ 0.19
PRIM1-201ENST00000338193 COL15A1P39059 1388 aa16.21■□□□□ 0.19
PRIM1-201ENST00000338193 TTLL7Q6ZT98 887 aa16.2■□□□□ 0.18
PRIM1-201ENST00000338193 ZNF579Q8NAF0 562 aaKnown RBP16.2■□□□□ 0.18
PRIM1-201ENST00000338193 PHAXQ9H814 394 aaKnown RBP16.2■□□□□ 0.18
PRIM1-201ENST00000338193 PLSCR2Q9NRY7 297 aa16.2■□□□□ 0.18
PRIM1-201ENST00000338193 BCORQ6W2J9 1755 aa16.2■□□□□ 0.18
PRIM1-201ENST00000338193 SCN7AQ01118 1682 aa16.19■□□□□ 0.18
PRIM1-201ENST00000338193 ARHGEF1Q92888 912 aaKnown RBP16.19■□□□□ 0.18
PRIM1-201ENST00000338193 RTCBQ9Y3I0 505 aaKnown RBP16.19■□□□□ 0.18
PRIM1-201ENST00000338193 IL6STP40189 918 aaPredicted RBP16.18■□□□□ 0.18
PRIM1-201ENST00000338193 SSH1Q8WYL5 1049 aa16.18■□□□□ 0.18
PRIM1-201ENST00000338193 DDX21Q9NR30 783 aaKnown RBP eCLIP16.18■□□□□ 0.18
PRIM1-201ENST00000338193 TBC1D2BQ9UPU7 963 aa16.18■□□□□ 0.18
PRIM1-201ENST00000338193 SSFA2P28290 1259 aa16.16■□□□□ 0.18
PRIM1-201ENST00000338193 AIMP1Q12904 312 aaKnown RBP16.16■□□□□ 0.18
PRIM1-201ENST00000338193 CCDC30Q5VVM6 783 aa16.16■□□□□ 0.18
PRIM1-201ENST00000338193 XAGE3Q8WTP9 111 aa16.16■□□□□ 0.18
PRIM1-201ENST00000338193 BCL2L12Q9HB09 334 aa16.16■□□□□ 0.18
PRIM1-201ENST00000338193 ERBB4Q15303 1308 aa16.16■□□□□ 0.18
PRIM1-201ENST00000338193 ARFGEF2Q9Y6D5 1785 aa16.16■□□□□ 0.18
PRIM1-201ENST00000338193 BCAR3O75815 825 aa16.15■□□□□ 0.18
PRIM1-201ENST00000338193 RARSP54136 660 aaKnown RBP16.15■□□□□ 0.18
PRIM1-201ENST00000338193 COPS6Q7L5N1 327 aa16.15■□□□□ 0.18
PRIM1-201ENST00000338193 MRPL50Q8N5N7 158 aaKnown RBP16.15■□□□□ 0.18
PRIM1-201ENST00000338193 DBF4Q9UBU7 674 aaPredicted RBP16.15■□□□□ 0.18
PRIM1-201ENST00000338193 CAMTA2O94983 1202 aa16.14■□□□□ 0.17
PRIM1-201ENST00000338193 HLFQ16534 295 aa16.14■□□□□ 0.17
PRIM1-201ENST00000338193 TRAPPC3LQ5T215 181 aa16.14■□□□□ 0.17
PRIM1-201ENST00000338193 MSL1Q68DK7 614 aa16.14■□□□□ 0.17
PRIM1-201ENST00000338193 DZIP3Q86Y13 1208 aaKnown RBP16.14■□□□□ 0.17
PRIM1-201ENST00000338193 USP42Q9H9J4 1324 aaKnown RBP16.14■□□□□ 0.17
PRIM1-201ENST00000338193 NUP98P52948 1817 aa16.14■□□□□ 0.17
PRIM1-201ENST00000338193 USPL1Q5W0Q7 1092 aa16.13■□□□□ 0.17
PRIM1-201ENST00000338193 ARXQ96QS3 562 aa16.13■□□□□ 0.17
PRIM1-201ENST00000338193 ZBTB3Q9H5J0 574 aa16.13■□□□□ 0.17
PRIM1-201ENST00000338193 TNNQ9UQP3 1299 aa16.13■□□□□ 0.17
PRIM1-201ENST00000338193 ZBTB7AO95365 584 aa16.13■□□□□ 0.17
PRIM1-201ENST00000338193 GYS1P13807 737 aa16.13■□□□□ 0.17
PRIM1-201ENST00000338193 FKBP8Q14318 412 aa16.13■□□□□ 0.17
PRIM1-201ENST00000338193 ZNF428Q96B54 188 aa16.13■□□□□ 0.17
PRIM1-201ENST00000338193 ADCY9O60503 1353 aa16.12■□□□□ 0.17
PRIM1-201ENST00000338193 CACNA1FO60840 1977 aa16.12■□□□□ 0.17
PRIM1-201ENST00000338193 COL24A1Q17RW2 1714 aa16.12■□□□□ 0.17
PRIM1-201ENST00000338193 RFC4P35249 363 aa16.12■□□□□ 0.17
PRIM1-201ENST00000338193 SMC4Q9NTJ3 1288 aa16.12■□□□□ 0.17
PRIM1-201ENST00000338193 HYPKQ9NX55 129 aa16.12■□□□□ 0.17
PRIM1-201ENST00000338193 NARFQ9UHQ1 456 aa16.12■□□□□ 0.17
PRIM1-201ENST00000338193 ANKRD36CQ5JPF3 1778 aa16.11■□□□□ 0.17
PRIM1-201ENST00000338193 FLIIQ13045 1269 aa16.11■□□□□ 0.17
PRIM1-201ENST00000338193 STK31Q9BXU1 1019 aa16.11■□□□□ 0.17
PRIM1-201ENST00000338193 MAP3K15Q6ZN16 1313 aa16.11■□□□□ 0.17
PRIM1-201ENST00000338193 F6X3S4 739 aa16.1■□□□□ 0.17
PRIM1-201ENST00000338193 CT47B1P0C2W7 299 aaPredicted RBP16.1■□□□□ 0.17
PRIM1-201ENST00000338193 ALDH1L2Q3SY69 923 aa16.1■□□□□ 0.17
PRIM1-201ENST00000338193 TBC1D9BQ66K14 1250 aa16.09■□□□□ 0.17
PRIM1-201ENST00000338193 A0A087WZG4 1122 aa16.08■□□□□ 0.16
PRIM1-201ENST00000338193 FLAD1Q8NFF5 587 aa16.08■□□□□ 0.16
PRIM1-201ENST00000338193 NOB1Q9ULX3 412 aaKnown RBP16.08■□□□□ 0.16
PRIM1-201ENST00000338193 UBN2Q6ZU65 1347 aa16.07■□□□□ 0.16
PRIM1-201ENST00000338193 PI4KAP2A4QPH2 592 aa16.07■□□□□ 0.16
PRIM1-201ENST00000338193 ZPR1O75312 459 aa16.07■□□□□ 0.16
PRIM1-201ENST00000338193 DDR1Q08345 913 aa16.07■□□□□ 0.16
PRIM1-201ENST00000338193 KIF6Q6ZMV9 814 aa16.07■□□□□ 0.16
PRIM1-201ENST00000338193 BICDL1Q6ZP65 573 aa16.07■□□□□ 0.16
PRIM1-201ENST00000338193 PI4KAP1Q8N8J0 262 aa16.07■□□□□ 0.16
PRIM1-201ENST00000338193 RCAN3Q9UKA8 241 aa16.07■□□□□ 0.16
PRIM1-201ENST00000338193 MAP3K2Q9Y2U5 619 aa16.07■□□□□ 0.16
PRIM1-201ENST00000338193 AFDNP55196 1824 aaKnown RBP16.07■□□□□ 0.16
PRIM1-201ENST00000338193 GPTP24298 496 aa16.06■□□□□ 0.16
PRIM1-201ENST00000338193 FKBP5Q13451 457 aaPredicted RBP16.06■□□□□ 0.16
PRIM1-201ENST00000338193 NFIXQ14938 502 aa16.06■□□□□ 0.16
PRIM1-201ENST00000338193 ANKRD13DQ6ZTN6 518 aa16.06■□□□□ 0.16
PRIM1-201ENST00000338193 PLBD2Q8NHP8 589 aa16.06■□□□□ 0.16
PRIM1-201ENST00000338193 ERVV-1B6SEH8 477 aa16.05■□□□□ 0.16
PRIM1-201ENST00000338193 ATP5J2-PTCD1G3V325 749 aa16.05■□□□□ 0.16
PRIM1-201ENST00000338193 PLIN1O60240 522 aa16.05■□□□□ 0.16
PRIM1-201ENST00000338193 GIGYF2Q6Y7W6 1299 aaKnown RBP16.05■□□□□ 0.16
PRIM1-201ENST00000338193 SGIP1Q9BQI5 828 aa16.05■□□□□ 0.16
PRIM1-201ENST00000338193 SRCAPQ6ZRS2 3230 aa16.05■□□□□ 0.16
PRIM1-201ENST00000338193 HMGB2P26583 209 aaKnown RBP16.04■□□□□ 0.16
PRIM1-201ENST00000338193 TM4SF1P30408 202 aa16.04■□□□□ 0.16
PRIM1-201ENST00000338193 PTGER2P43116 358 aa16.04■□□□□ 0.16
PRIM1-201ENST00000338193 BRPF1P55201 1214 aaPredicted RBP16.04■□□□□ 0.16
PRIM1-201ENST00000338193 KSR2Q6VAB6 950 aa16.04■□□□□ 0.16
PRIM1-201ENST00000338193 RIC3Q7Z5B4 369 aa16.04■□□□□ 0.16
PRIM1-201ENST00000338193 FRAT1Q92837 279 aaPredicted RBP16.04■□□□□ 0.16
PRIM1-201ENST00000338193 MYD88Q99836 296 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms