RNA–Protein interactions for RNA: ENST00000337665.8

ARHGEF1-201, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-201ENST00000337665 XIRP1Q702N8 1843 aaKnown RBP17.51■□□□□ 0.39
ARHGEF1-201ENST00000337665 TMEM94Q12767 1356 aa17.51■□□□□ 0.39
ARHGEF1-201ENST00000337665 LAMB4A4D0S4 1761 aa17.51■□□□□ 0.39
ARHGEF1-201ENST00000337665 GRM8O00222 908 aa17.51■□□□□ 0.39
ARHGEF1-201ENST00000337665 GLRX3O76003 335 aaKnown RBP17.51■□□□□ 0.39
ARHGEF1-201ENST00000337665 SUCLG2Q96I99 432 aa17.51■□□□□ 0.39
ARHGEF1-201ENST00000337665 AFDNP55196 1824 aaKnown RBP17.51■□□□□ 0.39
ARHGEF1-201ENST00000337665 ERC1Q8IUD2 1116 aa17.5■□□□□ 0.39
ARHGEF1-201ENST00000337665 DDX49Q9Y6V7 483 aaKnown RBP17.5■□□□□ 0.39
ARHGEF1-201ENST00000337665 DDX58O95786 925 aaKnown RBP17.5■□□□□ 0.39
ARHGEF1-201ENST00000337665 IGKV5-2P06315 115 aa17.5■□□□□ 0.39
ARHGEF1-201ENST00000337665 RAPGEF4Q8WZA2 1011 aa17.5■□□□□ 0.39
ARHGEF1-201ENST00000337665 ARFGEF2Q9Y6D5 1785 aa17.5■□□□□ 0.39
ARHGEF1-201ENST00000337665 BRD1O95696 1058 aa17.5■□□□□ 0.39
ARHGEF1-201ENST00000337665 LRP10Q7Z4F1 713 aa17.5■□□□□ 0.39
ARHGEF1-201ENST00000337665 TNS3Q68CZ2 1445 aa17.49■□□□□ 0.39
ARHGEF1-201ENST00000337665 DDX17Q92841 729 aaKnown RBP17.49■□□□□ 0.39
ARHGEF1-201ENST00000337665 PA2G4Q9UQ80 394 aaKnown RBP17.49■□□□□ 0.39
ARHGEF1-201ENST00000337665 TATP17735 454 aaPredicted RBP17.49■□□□□ 0.39
ARHGEF1-201ENST00000337665 SLC39A6Q13433 755 aa17.49■□□□□ 0.39
ARHGEF1-201ENST00000337665 CLASRPQ8N2M8 674 aaKnown RBP17.49■□□□□ 0.39
ARHGEF1-201ENST00000337665 SPG7Q9UQ90 795 aa17.49■□□□□ 0.39
ARHGEF1-201ENST00000337665 SNX14Q9Y5W7 946 aa17.49■□□□□ 0.39
ARHGEF1-201ENST00000337665 RRAGDQ9NQL2 400 aaPredicted RBP17.48■□□□□ 0.39
ARHGEF1-201ENST00000337665 ECHDC1Q9NTX5 307 aa17.48■□□□□ 0.39
ARHGEF1-201ENST00000337665 ATF3P18847 181 aa17.48■□□□□ 0.39
ARHGEF1-201ENST00000337665 ZNF445P59923 1031 aa17.48■□□□□ 0.39
ARHGEF1-201ENST00000337665 NFATC2IPQ8NCF5 419 aa17.48■□□□□ 0.39
ARHGEF1-201ENST00000337665 TTC14Q96N46 770 aa17.48■□□□□ 0.39
ARHGEF1-201ENST00000337665 BICC1Q9H694 974 aaKnown RBP17.48■□□□□ 0.39
ARHGEF1-201ENST00000337665 NLRP2Q9NX02 1062 aa17.48■□□□□ 0.39
ARHGEF1-201ENST00000337665 SASH1O94885 1247 aa17.48■□□□□ 0.39
ARHGEF1-201ENST00000337665 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.48■□□□□ 0.39
ARHGEF1-201ENST00000337665 OS9Q13438 667 aaPredicted RBP17.47■□□□□ 0.39
ARHGEF1-201ENST00000337665 UPF3BQ9BZI7 483 aaKnown RBP17.47■□□□□ 0.39
ARHGEF1-201ENST00000337665 IFNL2Q8IZJ0 200 aa17.47■□□□□ 0.39
ARHGEF1-201ENST00000337665 LARP1Q6PKG0 1096 aaKnown RBP17.46■□□□□ 0.39
ARHGEF1-201ENST00000337665 GPT2Q8TD30 523 aa17.46■□□□□ 0.39
ARHGEF1-201ENST00000337665 KCNB2Q92953 911 aa17.46■□□□□ 0.39
ARHGEF1-201ENST00000337665 CPDO75976 1380 aa17.46■□□□□ 0.39
ARHGEF1-201ENST00000337665 NEURL1BA8MQ27 555 aa17.46■□□□□ 0.39
ARHGEF1-201ENST00000337665 AIMP1Q12904 312 aaKnown RBP17.46■□□□□ 0.39
ARHGEF1-201ENST00000337665 RASEFQ8IZ41 740 aa17.46■□□□□ 0.39
ARHGEF1-201ENST00000337665 UBR2Q8IWV8 1755 aa17.45■□□□□ 0.38
ARHGEF1-201ENST00000337665 CYP27B1O15528 508 aa17.45■□□□□ 0.38
ARHGEF1-201ENST00000337665 CWC27Q6UX04 472 aaKnown RBP17.45■□□□□ 0.38
ARHGEF1-201ENST00000337665 ZNF496Q96IT1 587 aaPredicted RBP17.45■□□□□ 0.38
ARHGEF1-201ENST00000337665 DCAF5Q96JK2 942 aa17.45■□□□□ 0.38
ARHGEF1-201ENST00000337665 METTL22Q9BUU2 404 aaPredicted RBP17.45■□□□□ 0.38
ARHGEF1-201ENST00000337665 PRPF40AO75400 957 aaKnown RBP17.44■□□□□ 0.38
ARHGEF1-201ENST00000337665 GCKRQ14397 625 aa17.44■□□□□ 0.38
ARHGEF1-201ENST00000337665 COL15A1P39059 1388 aa17.44■□□□□ 0.38
ARHGEF1-201ENST00000337665 IFIT2P09913 472 aaKnown RBP17.44■□□□□ 0.38
ARHGEF1-201ENST00000337665 ZSCAN23Q3MJ62 389 aa17.44■□□□□ 0.38
ARHGEF1-201ENST00000337665 RIC3Q7Z5B4 369 aa17.44■□□□□ 0.38
ARHGEF1-201ENST00000337665 XAGE3Q8WTP9 111 aa17.44■□□□□ 0.38
ARHGEF1-201ENST00000337665 EVI5LQ96CN4 794 aa17.44■□□□□ 0.38
ARHGEF1-201ENST00000337665 GPATCH3Q96I76 525 aa17.44■□□□□ 0.38
ARHGEF1-201ENST00000337665 CHAMP1Q96JM3 812 aa17.44■□□□□ 0.38
ARHGEF1-201ENST00000337665 SPATA31A3Q5VYP0 1347 aa17.44■□□□□ 0.38
ARHGEF1-201ENST00000337665 EAF2Q96CJ1 260 aaPredicted RBP17.44■□□□□ 0.38
ARHGEF1-201ENST00000337665 SNRKQ9NRH2 765 aa17.44■□□□□ 0.38
ARHGEF1-201ENST00000337665 AACSQ86V21 672 aa17.43■□□□□ 0.38
ARHGEF1-201ENST00000337665 CABLES1Q8TDN4 633 aa17.43■□□□□ 0.38
ARHGEF1-201ENST00000337665 NUP188Q5SRE5 1749 aa17.43■□□□□ 0.38
ARHGEF1-201ENST00000337665 COPS6Q7L5N1 327 aa17.43■□□□□ 0.38
ARHGEF1-201ENST00000337665 PAPPAQ13219 1627 aa17.43■□□□□ 0.38
ARHGEF1-201ENST00000337665 MYL6BP14649 208 aa17.42■□□□□ 0.38
ARHGEF1-201ENST00000337665 PTH1RQ03431 593 aa17.42■□□□□ 0.38
ARHGEF1-201ENST00000337665 CAVIN1Q6NZI2 390 aaKnown RBP17.42■□□□□ 0.38
ARHGEF1-201ENST00000337665 RUFY2Q8WXA3 655 aa17.42■□□□□ 0.38
ARHGEF1-201ENST00000337665 USP16Q9Y5T5 823 aa17.42■□□□□ 0.38
ARHGEF1-201ENST00000337665 SNRPA1P09661 255 aaKnown RBP17.42■□□□□ 0.38
ARHGEF1-201ENST00000337665 NOL8Q76FK4 1167 aaKnown RBP17.42■□□□□ 0.38
ARHGEF1-201ENST00000337665 RPAP1Q9BWH6 1393 aaPredicted RBP17.42■□□□□ 0.38
ARHGEF1-201ENST00000337665 G3BP1Q13283 466 aaKnown RBP eCLIP17.42■□□□□ 0.38
ARHGEF1-201ENST00000337665 EPHA10Q5JZY3 1008 aa17.42■□□□□ 0.38
ARHGEF1-201ENST00000337665 KIAA1211Q6ZU35 1233 aa17.42■□□□□ 0.38
ARHGEF1-201ENST00000337665 CADPS2Q86UW7 1296 aa17.42■□□□□ 0.38
ARHGEF1-201ENST00000337665 DIAPH3Q9NSV4 1193 aa17.42■□□□□ 0.38
ARHGEF1-201ENST00000337665 TCHHQ07283 1943 aa17.42■□□□□ 0.38
ARHGEF1-201ENST00000337665 NEXNQ0ZGT2 675 aa17.41■□□□□ 0.38
ARHGEF1-201ENST00000337665 RUFY3Q7L099 469 aa17.41■□□□□ 0.38
ARHGEF1-201ENST00000337665 SHANK3Q9BYB0 1731 aa17.41■□□□□ 0.38
ARHGEF1-201ENST00000337665 DNAJC5Q9H3Z4 198 aa17.41■□□□□ 0.38
ARHGEF1-201ENST00000337665 AK2P54819 239 aa17.4■□□□□ 0.38
ARHGEF1-201ENST00000337665 CHRNA2Q15822 529 aa17.4■□□□□ 0.38
ARHGEF1-201ENST00000337665 MYD88Q99836 296 aa17.4■□□□□ 0.38
ARHGEF1-201ENST00000337665 ANKRD13DQ6ZTN6 518 aa17.4■□□□□ 0.38
ARHGEF1-201ENST00000337665 RFX5P48382 616 aaPredicted RBP17.4■□□□□ 0.38
ARHGEF1-201ENST00000337665 NECTIN1Q15223 517 aa17.4■□□□□ 0.38
ARHGEF1-201ENST00000337665 PPP1R9BQ96SB3 815 aa17.4■□□□□ 0.38
ARHGEF1-201ENST00000337665 TM6SF1Q9BZW5 370 aa17.4■□□□□ 0.38
ARHGEF1-201ENST00000337665 TLR7Q9NYK1 1049 aaKnown RBP17.4■□□□□ 0.38
ARHGEF1-201ENST00000337665 NSFL1CQ9UNZ2 370 aaKnown RBP17.4■□□□□ 0.38
ARHGEF1-201ENST00000337665 FMNL2Q96PY5 1086 aa17.39■□□□□ 0.37
ARHGEF1-201ENST00000337665 TJP1Q07157 1748 aa17.39■□□□□ 0.37
ARHGEF1-201ENST00000337665 CSB-PGBD3P0DP91 1061 aa17.39■□□□□ 0.37
ARHGEF1-201ENST00000337665 LIMCH1Q9UPQ0 1083 aa17.39■□□□□ 0.37
ARHGEF1-201ENST00000337665 ABCA3Q99758 1704 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms