RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 ANKRD1Q15327 319 aa11.16□□□□□ -0.62
FNDC3B-201ENST00000336824 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.16□□□□□ -0.62
FNDC3B-201ENST00000336824 USP31Q70CQ4 1352 aa11.16□□□□□ -0.62
FNDC3B-201ENST00000336824 TTF1Q15361 905 aaPredicted RBP11.16□□□□□ -0.62
FNDC3B-201ENST00000336824 PLBD2Q8NHP8 589 aa11.16□□□□□ -0.62
FNDC3B-201ENST00000336824 LGR6Q9HBX8 967 aa11.16□□□□□ -0.62
FNDC3B-201ENST00000336824 RBM5P52756 815 aaKnown RBP eCLIP11.16□□□□□ -0.62
FNDC3B-201ENST00000336824 PARP10Q53GL7 1025 aa11.16□□□□□ -0.62
FNDC3B-201ENST00000336824 QTRT2Q9H974 415 aaKnown RBP11.16□□□□□ -0.62
FNDC3B-201ENST00000336824 GNPATO15228 680 aa11.15□□□□□ -0.62
FNDC3B-201ENST00000336824 TMOD2Q9NZR1 351 aa11.15□□□□□ -0.62
FNDC3B-201ENST00000336824 CPSF1Q10570 1443 aaKnown RBP11.15□□□□□ -0.62
FNDC3B-201ENST00000336824 MAP3K12Q12852 859 aa11.15□□□□□ -0.62
FNDC3B-201ENST00000336824 HDAC1Q13547 482 aaPredicted RBP11.15□□□□□ -0.62
FNDC3B-201ENST00000336824 RABEP1Q15276 862 aa11.15□□□□□ -0.62
FNDC3B-201ENST00000336824 SAFBQ15424 915 aaKnown RBP eCLIP11.15□□□□□ -0.62
FNDC3B-201ENST00000336824 ZNF287Q9HBT7 754 aa11.15□□□□□ -0.62
FNDC3B-201ENST00000336824 ADGRB1O14514 1584 aa11.15□□□□□ -0.62
FNDC3B-201ENST00000336824 NCAPD2Q15021 1401 aa11.15□□□□□ -0.62
FNDC3B-201ENST00000336824 TULP1O00294 542 aaPredicted RBP11.15□□□□□ -0.62
FNDC3B-201ENST00000336824 UNC5CLQ8IV45 518 aa11.15□□□□□ -0.62
FNDC3B-201ENST00000336824 ANKRD18AQ8IVF6 992 aa11.15□□□□□ -0.62
FNDC3B-201ENST00000336824 KRT32Q14532 448 aa11.15□□□□□ -0.62
FNDC3B-201ENST00000336824 SMC3Q9UQE7 1217 aa11.15□□□□□ -0.62
FNDC3B-201ENST00000336824 DDX11L8A8MPP1 907 aa11.15□□□□□ -0.63
FNDC3B-201ENST00000336824 VPS53Q5VIR6 699 aa11.15□□□□□ -0.63
FNDC3B-201ENST00000336824 PARP3Q9Y6F1 533 aa11.15□□□□□ -0.63
FNDC3B-201ENST00000336824 IDH1O75874 414 aaKnown RBP11.14□□□□□ -0.63
FNDC3B-201ENST00000336824 POLD1P28340 1107 aa11.14□□□□□ -0.63
FNDC3B-201ENST00000336824 FOXD4L1Q9NU39 408 aa11.14□□□□□ -0.63
FNDC3B-201ENST00000336824 STK32BQ9NY57 414 aa11.14□□□□□ -0.63
FNDC3B-201ENST00000336824 TSPYL6Q8N831 410 aa11.14□□□□□ -0.63
FNDC3B-201ENST00000336824 BRMS1Q9HCU9 246 aa11.14□□□□□ -0.63
FNDC3B-201ENST00000336824 SIGLEC1Q9BZZ2 1709 aa11.14□□□□□ -0.63
FNDC3B-201ENST00000336824 ABCF2Q9UG63 623 aa11.14□□□□□ -0.63
FNDC3B-201ENST00000336824 AIDAQ96BJ3 306 aa11.14□□□□□ -0.63
FNDC3B-201ENST00000336824 IFT172Q9UG01 1749 aa11.14□□□□□ -0.63
FNDC3B-201ENST00000336824 NUTM1Q86Y26 1132 aa11.14□□□□□ -0.63
FNDC3B-201ENST00000336824 MCTP1Q6DN14 999 aa11.13□□□□□ -0.63
FNDC3B-201ENST00000336824 ERBB4Q15303 1308 aa11.13□□□□□ -0.63
FNDC3B-201ENST00000336824 TDO2P48775 406 aa11.13□□□□□ -0.63
FNDC3B-201ENST00000336824 DZIP1Q86YF9 867 aaKnown RBP11.13□□□□□ -0.63
FNDC3B-201ENST00000336824 CERKQ8TCT0 537 aa11.13□□□□□ -0.63
FNDC3B-201ENST00000336824 JCADQ9P266 1359 aa11.13□□□□□ -0.63
FNDC3B-201ENST00000336824 MEIS3Q99687 375 aa11.13□□□□□ -0.63
FNDC3B-201ENST00000336824 CCDC87Q9NVE4 849 aa11.13□□□□□ -0.63
FNDC3B-201ENST00000336824 TPM4P67936 248 aa11.13□□□□□ -0.63
FNDC3B-201ENST00000336824 PLCB2Q00722 1185 aa11.13□□□□□ -0.63
FNDC3B-201ENST00000336824 SPTY2D1Q68D10 685 aaPredicted RBP11.13□□□□□ -0.63
FNDC3B-201ENST00000336824 CCDC191Q8NCU4 936 aa11.13□□□□□ -0.63
FNDC3B-201ENST00000336824 PLEKHF1Q96S99 279 aa11.13□□□□□ -0.63
FNDC3B-201ENST00000336824 ANKRD44Q8N8A2 993 aa11.13□□□□□ -0.63
FNDC3B-201ENST00000336824 METTL22Q9BUU2 404 aaPredicted RBP11.13□□□□□ -0.63
FNDC3B-201ENST00000336824 NUCB2P80303 420 aa11.13□□□□□ -0.63
FNDC3B-201ENST00000336824 FAM196AQ6ZSG2 479 aa11.13□□□□□ -0.63
FNDC3B-201ENST00000336824 UQCRFS1P1P0C7P4 283 aa11.12□□□□□ -0.63
FNDC3B-201ENST00000336824 IL15P40933 162 aaPredicted RBP11.12□□□□□ -0.63
FNDC3B-201ENST00000336824 EIF4A1P60842 406 aaKnown RBP11.12□□□□□ -0.63
FNDC3B-201ENST00000336824 TCEAL9Q9UHQ7 104 aa11.12□□□□□ -0.63
FNDC3B-201ENST00000336824 CYP46A1Q9Y6A2 500 aa11.12□□□□□ -0.63
FNDC3B-201ENST00000336824 C6orf229H3BNL8 230 aa11.12□□□□□ -0.63
FNDC3B-201ENST00000336824 MAP4K4O95819 1239 aaPredicted RBP11.12□□□□□ -0.63
FNDC3B-201ENST00000336824 FLAD1Q8NFF5 587 aa11.12□□□□□ -0.63
FNDC3B-201ENST00000336824 ECHDC1Q9NTX5 307 aa11.12□□□□□ -0.63
FNDC3B-201ENST00000336824 KIF1AQ12756 1690 aa11.12□□□□□ -0.63
FNDC3B-201ENST00000336824 RXRBP28702 533 aa11.12□□□□□ -0.63
FNDC3B-201ENST00000336824 ZNF622Q969S3 477 aaKnown RBP eCLIP11.12□□□□□ -0.631e-6■■□□□ 13.8
FNDC3B-201ENST00000336824 EVI5LQ96CN4 794 aa11.12□□□□□ -0.63
FNDC3B-201ENST00000336824 ARHGAP23Q9P227 1491 aa11.12□□□□□ -0.63
FNDC3B-201ENST00000336824 CWC27Q6UX04 472 aaKnown RBP11.12□□□□□ -0.63
FNDC3B-201ENST00000336824 ZGPATQ8N5A5 531 aaKnown RBP11.12□□□□□ -0.63
FNDC3B-201ENST00000336824 PDCP20941 246 aa11.12□□□□□ -0.63
FNDC3B-201ENST00000336824 BAG6P46379 1132 aa11.12□□□□□ -0.63
FNDC3B-201ENST00000336824 CHAF1AQ13111 956 aaPredicted RBP11.12□□□□□ -0.63
FNDC3B-201ENST00000336824 ATP8B2P98198 1209 aa11.11□□□□□ -0.63
FNDC3B-201ENST00000336824 BOLA2Q9H3K6 86 aa11.11□□□□□ -0.63
FNDC3B-201ENST00000336824 L1TD1Q5T7N2 865 aaKnown RBP11.11□□□□□ -0.63
FNDC3B-201ENST00000336824 U3KPZ7 1027 aaPredicted RBP11.11□□□□□ -0.63
FNDC3B-201ENST00000336824 IMMTQ16891 758 aaKnown RBP11.11□□□□□ -0.63
FNDC3B-201ENST00000336824 RRP12Q5JTH9 1297 aaKnown RBP11.11□□□□□ -0.63
FNDC3B-201ENST00000336824 CWC22Q9HCG8 908 aaKnown RBP11.11□□□□□ -0.63
FNDC3B-201ENST00000336824 KRT24Q2M2I5 525 aa11.11□□□□□ -0.63
FNDC3B-201ENST00000336824 IL17REQ8NFR9 667 aa11.11□□□□□ -0.63
FNDC3B-201ENST00000336824 IRS4O14654 1257 aaPredicted RBP11.11□□□□□ -0.63
FNDC3B-201ENST00000336824 SPINK5Q9NQ38 1064 aaPredicted RBP11.11□□□□□ -0.63
FNDC3B-201ENST00000336824 SPATA31A6Q5VVP1 1343 aa11.1□□□□□ -0.63
FNDC3B-201ENST00000336824 PIP4K2AP48426 406 aaPredicted RBP11.1□□□□□ -0.63
FNDC3B-201ENST00000336824 ZNF496Q96IT1 587 aaPredicted RBP11.1□□□□□ -0.63
FNDC3B-201ENST00000336824 SMARCA5O60264 1052 aaPredicted RBP11.1□□□□□ -0.63
FNDC3B-201ENST00000336824 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.1□□□□□ -0.63
FNDC3B-201ENST00000336824 LMBR1LQ6UX01 489 aa11.1□□□□□ -0.63
FNDC3B-201ENST00000336824 PTPRUQ92729 1446 aa11.1□□□□□ -0.63
FNDC3B-201ENST00000336824 APBA3O96018 575 aa11.1□□□□□ -0.63
FNDC3B-201ENST00000336824 NEK4P51957 841 aa11.1□□□□□ -0.63
FNDC3B-201ENST00000336824 IKQ13123 557 aaPredicted RBP11.1□□□□□ -0.63
FNDC3B-201ENST00000336824 CCDC8Q9H0W5 538 aaPredicted RBP11.1□□□□□ -0.63
FNDC3B-201ENST00000336824 LDHCP07864 332 aa11.1□□□□□ -0.63
FNDC3B-201ENST00000336824 CNBD1Q8NA66 436 aa11.09□□□□□ -0.63
FNDC3B-201ENST00000336824 GIGYF1O75420 1035 aaPredicted RBP11.09□□□□□ -0.63
FNDC3B-201ENST00000336824 ZSCAN29Q8IWY8 852 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms