RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 NAP1L5Q96NT1 182 aaPredicted RBP16.24■□□□□ 0.19
TUBA1B-201ENST00000332858 TCHHQ07283 1943 aa16.24■□□□□ 0.19
TUBA1B-201ENST00000332858 LMO7Q8WWI1 1683 aa16.24■□□□□ 0.19
TUBA1B-201ENST00000332858 AK2P54819 239 aa16.24■□□□□ 0.19
TUBA1B-201ENST00000332858 MTX1Q13505 466 aa16.24■□□□□ 0.19
TUBA1B-201ENST00000332858 DDX54Q8TDD1 881 aaKnown RBP16.24■□□□□ 0.19
TUBA1B-201ENST00000332858 TTC14Q96N46 770 aa16.24■□□□□ 0.19
TUBA1B-201ENST00000332858 ZC3H6P61129 1189 aaKnown RBP16.24■□□□□ 0.19
TUBA1B-201ENST00000332858 RUFY3Q7L099 469 aa16.23■□□□□ 0.19
TUBA1B-201ENST00000332858 HEG1Q9ULI3 1381 aa16.23■□□□□ 0.19
TUBA1B-201ENST00000332858 COL9A3Q14050 684 aaPredicted RBP16.23■□□□□ 0.19
TUBA1B-201ENST00000332858 CLASRPQ8N2M8 674 aaKnown RBP16.23■□□□□ 0.19
TUBA1B-201ENST00000332858 SUCLG2Q96I99 432 aa16.23■□□□□ 0.19
TUBA1B-201ENST00000332858 PDIA6Q15084 440 aa16.22■□□□□ 0.19
TUBA1B-201ENST00000332858 ADCK5Q3MIX3 580 aa16.22■□□□□ 0.19
TUBA1B-201ENST00000332858 LARGE1O95461 756 aa16.22■□□□□ 0.19
TUBA1B-201ENST00000332858 KLHDC4Q8TBB5 520 aa16.22■□□□□ 0.19
TUBA1B-201ENST00000332858 GLRX3O76003 335 aaKnown RBP16.22■□□□□ 0.19
TUBA1B-201ENST00000332858 SASH1O94885 1247 aa16.22■□□□□ 0.19
TUBA1B-201ENST00000332858 BICC1Q9H694 974 aaKnown RBP16.22■□□□□ 0.19
TUBA1B-201ENST00000332858 USP42Q9H9J4 1324 aaKnown RBP16.21■□□□□ 0.19
TUBA1B-201ENST00000332858 RPAP1Q9BWH6 1393 aaPredicted RBP16.21■□□□□ 0.19
TUBA1B-201ENST00000332858 HSP90AB4PQ58FF6 505 aa16.21■□□□□ 0.19
TUBA1B-201ENST00000332858 LRSAM1Q6UWE0 723 aa16.21■□□□□ 0.19
TUBA1B-201ENST00000332858 RNF214Q8ND24 703 aa16.21■□□□□ 0.19
TUBA1B-201ENST00000332858 ALDH1L1O75891 902 aa16.21■□□□□ 0.19
TUBA1B-201ENST00000332858 AACSQ86V21 672 aa16.21■□□□□ 0.19
TUBA1B-201ENST00000332858 DDX17Q92841 729 aaKnown RBP16.21■□□□□ 0.19
TUBA1B-201ENST00000332858 CCDC8Q9H0W5 538 aaPredicted RBP16.21■□□□□ 0.19
TUBA1B-201ENST00000332858 ECHDC1Q9NTX5 307 aa16.21■□□□□ 0.19
TUBA1B-201ENST00000332858 TLR7Q9NYK1 1049 aaKnown RBP16.21■□□□□ 0.19
TUBA1B-201ENST00000332858 CASTP20810 708 aaKnown RBP16.2■□□□□ 0.18
TUBA1B-201ENST00000332858 PIP4K2AP48426 406 aaPredicted RBP16.2■□□□□ 0.18
TUBA1B-201ENST00000332858 KIAA1211Q6ZU35 1233 aa16.2■□□□□ 0.18
TUBA1B-201ENST00000332858 KRT28Q7Z3Y7 464 aa16.2■□□□□ 0.18
TUBA1B-201ENST00000332858 USP48Q86UV5 1035 aa16.2■□□□□ 0.18
TUBA1B-201ENST00000332858 EAF2Q96CJ1 260 aaPredicted RBP16.2■□□□□ 0.18
TUBA1B-201ENST00000332858 SIL1Q9H173 461 aa16.2■□□□□ 0.18
TUBA1B-201ENST00000332858 TTC41PQ6P2S7 1318 aa16.2■□□□□ 0.18
TUBA1B-201ENST00000332858 IGKV5-2P06315 115 aa16.2■□□□□ 0.18
TUBA1B-201ENST00000332858 MYL6BP14649 208 aa16.2■□□□□ 0.18
TUBA1B-201ENST00000332858 ANP32BQ92688 251 aaKnown RBP16.2■□□□□ 0.18
TUBA1B-201ENST00000332858 DIAPH3Q9NSV4 1193 aa16.2■□□□□ 0.18
TUBA1B-201ENST00000332858 GRM8O00222 908 aa16.2■□□□□ 0.18
TUBA1B-201ENST00000332858 EPB41L2O43491 1005 aaKnown RBP16.2■□□□□ 0.18
TUBA1B-201ENST00000332858 IFIT2P09913 472 aaKnown RBP16.2■□□□□ 0.18
TUBA1B-201ENST00000332858 PRPF40BQ6NWY9 871 aaKnown RBP16.2■□□□□ 0.18
TUBA1B-201ENST00000332858 JARID2Q92833 1246 aaPredicted RBP16.2■□□□□ 0.18
TUBA1B-201ENST00000332858 FAM227BQ96M60 508 aa16.19■□□□□ 0.18
TUBA1B-201ENST00000332858 NCAPD2Q15021 1401 aa16.19■□□□□ 0.18
TUBA1B-201ENST00000332858 PHRF1Q9P1Y6 1649 aaKnown RBP16.19■□□□□ 0.18
TUBA1B-201ENST00000332858 LINS1Q8NG48 757 aa16.18■□□□□ 0.18
TUBA1B-201ENST00000332858 CHMP4AQ9BY43 222 aa16.18■□□□□ 0.18
TUBA1B-201ENST00000332858 HYPKQ9NX55 129 aa16.18■□□□□ 0.18
TUBA1B-201ENST00000332858 RGPD5Q99666 1765 aa16.18■□□□□ 0.18
TUBA1B-201ENST00000332858 NFATC2IPQ8NCF5 419 aa16.18■□□□□ 0.18
TUBA1B-201ENST00000332858 DDX21Q9NR30 783 aaKnown RBP eCLIP16.18■□□□□ 0.18
TUBA1B-201ENST00000332858 MBD3O95983 291 aa16.18■□□□□ 0.18
TUBA1B-201ENST00000332858 EPHA10Q5JZY3 1008 aa16.18■□□□□ 0.18
TUBA1B-201ENST00000332858 PDLIM2Q96JY6 352 aa16.18■□□□□ 0.18
TUBA1B-201ENST00000332858 FBXO3Q9UK99 471 aa16.18■□□□□ 0.18
TUBA1B-201ENST00000332858 LIMCH1Q9UPQ0 1083 aa16.18■□□□□ 0.18
TUBA1B-201ENST00000332858 CNPY2Q9Y2B0 182 aa16.18■□□□□ 0.18
TUBA1B-201ENST00000332858 ERBB3P21860 1342 aa16.17■□□□□ 0.18
TUBA1B-201ENST00000332858 WDR33Q9C0J8 1336 aaKnown RBP16.17■□□□□ 0.18
TUBA1B-201ENST00000332858 SYT1P21579 422 aa16.17■□□□□ 0.18
TUBA1B-201ENST00000332858 JAKMIP1Q96N16 626 aaKnown RBP16.17■□□□□ 0.18
TUBA1B-201ENST00000332858 CRYBG1Q9Y4K1 1723 aa16.17■□□□□ 0.18
TUBA1B-201ENST00000332858 ZNF790Q6PG37 636 aa16.17■□□□□ 0.18
TUBA1B-201ENST00000332858 ZSCAN30Q86W11 494 aa16.17■□□□□ 0.18
TUBA1B-201ENST00000332858 SLIT3O75094 1523 aa16.17■□□□□ 0.18
TUBA1B-201ENST00000332858 PDIA4P13667 645 aaKnown RBP16.16■□□□□ 0.18
TUBA1B-201ENST00000332858 RIC3Q7Z5B4 369 aa16.16■□□□□ 0.18
TUBA1B-201ENST00000332858 NLRP2Q9NX02 1062 aa16.16■□□□□ 0.18
TUBA1B-201ENST00000332858 CCDC83Q8IWF9 413 aa16.16■□□□□ 0.18
TUBA1B-201ENST00000332858 BOLA2Q9H3K6 86 aa16.16■□□□□ 0.18
TUBA1B-201ENST00000332858 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.16■□□□□ 0.18
TUBA1B-201ENST00000332858 TAF6LQ9Y6J9 622 aa16.16■□□□□ 0.18
TUBA1B-201ENST00000332858 ST3GAL1Q11201 340 aa16.15■□□□□ 0.18
TUBA1B-201ENST00000332858 NMIQ13287 307 aaPredicted RBP16.15■□□□□ 0.18
TUBA1B-201ENST00000332858 NECTIN1Q15223 517 aa16.15■□□□□ 0.18
TUBA1B-201ENST00000332858 COPS6Q7L5N1 327 aa16.15■□□□□ 0.18
TUBA1B-201ENST00000332858 PROSER2Q86WR7 435 aaPredicted RBP16.15■□□□□ 0.18
TUBA1B-201ENST00000332858 CABLES1Q8TDN4 633 aa16.15■□□□□ 0.18
TUBA1B-201ENST00000332858 XAGE3Q8WTP9 111 aa16.15■□□□□ 0.18
TUBA1B-201ENST00000332858 EDC3Q96F86 508 aaKnown RBP16.15■□□□□ 0.18
TUBA1B-201ENST00000332858 NPHP4O75161 1426 aaPredicted RBP16.15■□□□□ 0.18
TUBA1B-201ENST00000332858 UTYO14607 1347 aa16.14■□□□□ 0.18
TUBA1B-201ENST00000332858 STX6O43752 255 aa16.14■□□□□ 0.17
TUBA1B-201ENST00000332858 ZSCAN22P10073 491 aaPredicted RBP16.14■□□□□ 0.17
TUBA1B-201ENST00000332858 G3BP1Q13283 466 aaKnown RBP eCLIP16.14■□□□□ 0.174e-9■■■□□ 17.7
TUBA1B-201ENST00000332858 EVI5LQ96CN4 794 aa16.14■□□□□ 0.17
TUBA1B-201ENST00000332858 ZNF496Q96IT1 587 aaPredicted RBP16.14■□□□□ 0.17
TUBA1B-201ENST00000332858 USP16Q9Y5T5 823 aa16.14■□□□□ 0.17
TUBA1B-201ENST00000332858 ERC1Q8IUD2 1116 aa16.14■□□□□ 0.17
TUBA1B-201ENST00000332858 NECAB1Q8N987 351 aa16.14■□□□□ 0.17
TUBA1B-201ENST00000332858 KDM6AO15550 1401 aaPredicted RBP16.14■□□□□ 0.17
TUBA1B-201ENST00000332858 A0A0D9SFI3 127 aa16.14■□□□□ 0.17
TUBA1B-201ENST00000332858 TCEANC2Q96MN5 208 aa16.14■□□□□ 0.17
TUBA1B-201ENST00000332858 SLC52A2Q9HAB3 445 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 582.9 ms