RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 IFIT5Q13325 482 aaKnown RBP16.23■□□□□ 0.19
DNMT3B-202ENST00000328111 ANKRD20A12PQ8NF67 263 aa16.23■□□□□ 0.19
DNMT3B-202ENST00000328111 LGR6Q9HBX8 967 aa16.23■□□□□ 0.19
DNMT3B-202ENST00000328111 IP6K1Q92551 441 aa16.23■□□□□ 0.19
DNMT3B-202ENST00000328111 PLEKHG3A1L390 1219 aa16.23■□□□□ 0.19
DNMT3B-202ENST00000328111 ABCC4O15439 1325 aa16.23■□□□□ 0.19
DNMT3B-202ENST00000328111 TRIM22Q8IYM9 498 aa16.23■□□□□ 0.19
DNMT3B-202ENST00000328111 AKAP2Q9Y2D5 859 aa16.23■□□□□ 0.19
DNMT3B-202ENST00000328111 HCLS1P14317 486 aaPredicted RBP16.22■□□□□ 0.19
DNMT3B-202ENST00000328111 NEO1Q92859 1461 aa16.22■□□□□ 0.19
DNMT3B-202ENST00000328111 PLXNC1O60486 1568 aa16.22■□□□□ 0.19
DNMT3B-202ENST00000328111 UQCRHLA0A096LP55 91 aa16.22■□□□□ 0.19
DNMT3B-202ENST00000328111 UQCRHP07919 91 aa16.22■□□□□ 0.19
DNMT3B-202ENST00000328111 TDO2P48775 406 aa16.22■□□□□ 0.19
DNMT3B-202ENST00000328111 SBNO1A3KN83 1393 aa16.22■□□□□ 0.19
DNMT3B-202ENST00000328111 NUTM2BA6NNL0 878 aaPredicted RBP16.22■□□□□ 0.19
DNMT3B-202ENST00000328111 NUTM2EB1AL46 878 aaPredicted RBP16.22■□□□□ 0.19
DNMT3B-202ENST00000328111 ZSCAN22P10073 491 aaPredicted RBP16.22■□□□□ 0.19
DNMT3B-202ENST00000328111 LMBR1LQ6UX01 489 aa16.22■□□□□ 0.19
DNMT3B-202ENST00000328111 NUTM2AQ8IVF1 878 aaPredicted RBP16.22■□□□□ 0.19
DNMT3B-202ENST00000328111 PCMTD1Q96MG8 357 aaPredicted RBP16.22■□□□□ 0.19
DNMT3B-202ENST00000328111 LRRC2Q9BYS8 371 aa16.22■□□□□ 0.19
DNMT3B-202ENST00000328111 BRMS1Q9HCU9 246 aa16.22■□□□□ 0.19
DNMT3B-202ENST00000328111 AIDAQ96BJ3 306 aa16.21■□□□□ 0.19
DNMT3B-202ENST00000328111 NEK1Q96PY6 1258 aa16.21■□□□□ 0.19
DNMT3B-202ENST00000328111 ABCF2Q9UG63 623 aa16.21■□□□□ 0.19
DNMT3B-202ENST00000328111 CNPY2Q9Y2B0 182 aa16.21■□□□□ 0.19
DNMT3B-202ENST00000328111 CCDC69A6NI79 296 aa16.21■□□□□ 0.19
DNMT3B-202ENST00000328111 PRIM1P49642 420 aaKnown RBP16.21■□□□□ 0.19
DNMT3B-202ENST00000328111 USP19O94966 1318 aa16.21■□□□□ 0.19
DNMT3B-202ENST00000328111 CPA1P15085 419 aa16.21■□□□□ 0.19
DNMT3B-202ENST00000328111 HAND2P61296 217 aa16.21■□□□□ 0.19
DNMT3B-202ENST00000328111 USP48Q86UV5 1035 aa16.21■□□□□ 0.19
DNMT3B-202ENST00000328111 CEP57L1Q8IYX8 460 aa16.21■□□□□ 0.19
DNMT3B-202ENST00000328111 CWC25Q9NXE8 425 aaPredicted RBP16.21■□□□□ 0.19
DNMT3B-202ENST00000328111 LRP2BPQ9P2M1 347 aa16.21■□□□□ 0.19
DNMT3B-202ENST00000328111 ADCY10Q96PN6 1610 aa16.21■□□□□ 0.19
DNMT3B-202ENST00000328111 GSPT1P15170 499 aaKnown RBP16.21■□□□□ 0.18
DNMT3B-202ENST00000328111 UBE2HP62256 183 aa16.21■□□□□ 0.18
DNMT3B-202ENST00000328111 GIMAP6Q6P9H5 292 aa16.21■□□□□ 0.18
DNMT3B-202ENST00000328111 METP08581 1390 aa16.2■□□□□ 0.18
DNMT3B-202ENST00000328111 NBPF7P0C2Y1 421 aaPredicted RBP16.2■□□□□ 0.18
DNMT3B-202ENST00000328111 TRPM1Q7Z4N2 1603 aa16.2■□□□□ 0.18
DNMT3B-202ENST00000328111 LRSAM1Q6UWE0 723 aa16.2■□□□□ 0.18
DNMT3B-202ENST00000328111 BRF1Q92994 677 aa16.2■□□□□ 0.18
DNMT3B-202ENST00000328111 AK2P54819 239 aa16.2■□□□□ 0.18
DNMT3B-202ENST00000328111 MNS1Q8NEH6 495 aa16.2■□□□□ 0.18
DNMT3B-202ENST00000328111 GNL3LQ9NVN8 582 aaKnown RBP16.2■□□□□ 0.18
DNMT3B-202ENST00000328111 ZCCHC11Q5TAX3 1644 aaKnown RBP16.2■□□□□ 0.18
DNMT3B-202ENST00000328111 SERPINC1P01008 464 aa16.19■□□□□ 0.18
DNMT3B-202ENST00000328111 MAP7D2Q96T17 732 aa16.19■□□□□ 0.18
DNMT3B-202ENST00000328111 TRMT112Q9UI30 125 aaKnown RBP16.19■□□□□ 0.18
DNMT3B-202ENST00000328111 ZFYVE16Q7Z3T8 1539 aa16.19■□□□□ 0.18
DNMT3B-202ENST00000328111 IPO7O95373 1038 aaKnown RBP16.19■□□□□ 0.18
DNMT3B-202ENST00000328111 HMGB1P09429 215 aaKnown RBP16.19■□□□□ 0.18
DNMT3B-202ENST00000328111 LDHAL6AQ6ZMR3 332 aa16.19■□□□□ 0.18
DNMT3B-202ENST00000328111 CADPS2Q86UW7 1296 aa16.19■□□□□ 0.18
DNMT3B-202ENST00000328111 ORAI2Q96SN7 254 aa16.19■□□□□ 0.18
DNMT3B-202ENST00000328111 TMEM2Q9UHN6 1383 aa16.19■□□□□ 0.18
DNMT3B-202ENST00000328111 RNMTO43148 476 aaKnown RBP16.18■□□□□ 0.18
DNMT3B-202ENST00000328111 CCDC82Q8N4S0 544 aa16.18■□□□□ 0.18
DNMT3B-202ENST00000328111 IQGAP3Q86VI3 1631 aa16.18■□□□□ 0.18
DNMT3B-202ENST00000328111 CCDC47Q96A33 483 aaKnown RBP16.18■□□□□ 0.18
DNMT3B-202ENST00000328111 C8orf76Q96K31 380 aa16.18■□□□□ 0.18
DNMT3B-202ENST00000328111 MLH3Q9UHC1 1453 aa16.18■□□□□ 0.18
DNMT3B-202ENST00000328111 CHD1O14646 1710 aa16.18■□□□□ 0.18
DNMT3B-202ENST00000328111 CDKL5O76039 1030 aa16.18■□□□□ 0.18
DNMT3B-202ENST00000328111 NMIQ13287 307 aaPredicted RBP16.18■□□□□ 0.18
DNMT3B-202ENST00000328111 NBPF6Q5VWK0 638 aa16.18■□□□□ 0.18
DNMT3B-202ENST00000328111 BICDL1Q6ZP65 573 aa16.18■□□□□ 0.18
DNMT3B-202ENST00000328111 RAB11FIP4Q86YS3 637 aa16.18■□□□□ 0.18
DNMT3B-202ENST00000328111 NBPF4Q96M43 638 aa16.18■□□□□ 0.18
DNMT3B-202ENST00000328111 RAI14Q9P0K7 980 aa16.18■□□□□ 0.18
DNMT3B-202ENST00000328111 DTNBO60941 627 aa16.17■□□□□ 0.18
DNMT3B-202ENST00000328111 DNM1Q05193 864 aaKnown RBP16.17■□□□□ 0.18
DNMT3B-202ENST00000328111 UBAC1Q9BSL1 405 aa16.17■□□□□ 0.18
DNMT3B-202ENST00000328111 ZNF213O14771 459 aa16.17■□□□□ 0.18
DNMT3B-202ENST00000328111 ADCY5O95622 1261 aa16.17■□□□□ 0.18
DNMT3B-202ENST00000328111 BRPF1P55201 1214 aaPredicted RBP16.17■□□□□ 0.18
DNMT3B-202ENST00000328111 MTERF4Q7Z6M4 381 aaKnown RBP16.17■□□□□ 0.18
DNMT3B-202ENST00000328111 TTC41PQ6P2S7 1318 aa16.17■□□□□ 0.18
DNMT3B-202ENST00000328111 IL17REQ8NFR9 667 aa16.17■□□□□ 0.18
DNMT3B-202ENST00000328111 HMG20BQ9P0W2 317 aa16.17■□□□□ 0.18
DNMT3B-202ENST00000328111 BICC1Q9H694 974 aaKnown RBP16.16■□□□□ 0.18
DNMT3B-202ENST00000328111 DDX21Q9NR30 783 aaKnown RBP eCLIP16.16■□□□□ 0.18
DNMT3B-202ENST00000328111 RTL1A6NKG5 1358 aa16.16■□□□□ 0.18
DNMT3B-202ENST00000328111 AEBP2Q6ZN18 517 aaPredicted RBP16.16■□□□□ 0.18
DNMT3B-202ENST00000328111 KLHDC4Q8TBB5 520 aa16.16■□□□□ 0.18
DNMT3B-202ENST00000328111 IGHMBP2P38935 993 aaKnown RBP16.15■□□□□ 0.18
DNMT3B-202ENST00000328111 GOLGA8BA8MQT2 603 aa16.15■□□□□ 0.18
DNMT3B-202ENST00000328111 CLCN1P35523 988 aa16.15■□□□□ 0.18
DNMT3B-202ENST00000328111 NAPBQ9H115 298 aa16.15■□□□□ 0.18
DNMT3B-202ENST00000328111 KIAA0232Q92628 1395 aa16.15■□□□□ 0.18
DNMT3B-202ENST00000328111 INTS4Q96HW7 963 aaKnown RBP16.15■□□□□ 0.18
DNMT3B-202ENST00000328111 USP44Q9H0E7 712 aa16.15■□□□□ 0.18
DNMT3B-202ENST00000328111 CCDC112Q8NEF3 446 aa16.15■□□□□ 0.18
DNMT3B-202ENST00000328111 F13A1P00488 732 aa16.14■□□□□ 0.17
DNMT3B-202ENST00000328111 TTLL5Q6EMB2 1281 aa16.14■□□□□ 0.17
DNMT3B-202ENST00000328111 ZNF771Q7L3S4 317 aaPredicted RBP16.14■□□□□ 0.17
DNMT3B-202ENST00000328111 GOLGA6L1Q8N7Z2 621 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms