RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 ITPRIPQ8IWB1 547 aa23.68■■□□□ 1.38
EXOSC3-201ENST00000327304 MAP3K2Q9Y2U5 619 aa23.68■■□□□ 1.38
EXOSC3-201ENST00000327304 DNAAF4Q8WXU2 420 aa23.68■■□□□ 1.38
EXOSC3-201ENST00000327304 DDX19BQ9UMR2 479 aa23.68■■□□□ 1.38
EXOSC3-201ENST00000327304 ANKRD13DQ6ZTN6 518 aa23.67■■□□□ 1.38
EXOSC3-201ENST00000327304 PXDNLA1KZ92 1463 aa23.67■■□□□ 1.38
EXOSC3-201ENST00000327304 INTS3Q68E01 1043 aaKnown RBP23.66■■□□□ 1.38
EXOSC3-201ENST00000327304 RIC3Q7Z5B4 369 aa23.66■■□□□ 1.38
EXOSC3-201ENST00000327304 ARFGEF2Q9Y6D5 1785 aa23.66■■□□□ 1.38
EXOSC3-201ENST00000327304 NUP188Q5SRE5 1749 aa23.66■■□□□ 1.38
EXOSC3-201ENST00000327304 N4BP2Q86UW6 1770 aaPredicted RBP23.65■■□□□ 1.38
EXOSC3-201ENST00000327304 GNPATO15228 680 aa23.65■■□□□ 1.38
EXOSC3-201ENST00000327304 EN1Q05925 392 aaPredicted RBP23.65■■□□□ 1.38
EXOSC3-201ENST00000327304 SMIM5Q71RC9 77 aa23.65■■□□□ 1.38
EXOSC3-201ENST00000327304 PLBD2Q8NHP8 589 aa23.65■■□□□ 1.38
EXOSC3-201ENST00000327304 ZBTB3Q9H5J0 574 aa23.65■■□□□ 1.38
EXOSC3-201ENST00000327304 ARXQ96QS3 562 aa23.64■■□□□ 1.38
EXOSC3-201ENST00000327304 COL15A1P39059 1388 aa23.64■■□□□ 1.37
EXOSC3-201ENST00000327304 CCT4P50991 539 aaKnown RBP23.63■■□□□ 1.37
EXOSC3-201ENST00000327304 SF3B2Q13435 895 aaKnown RBP23.63■■□□□ 1.37
EXOSC3-201ENST00000327304 KIF6Q6ZMV9 814 aa23.63■■□□□ 1.37
EXOSC3-201ENST00000327304 AMIGO3Q86WK7 504 aa23.63■■□□□ 1.37
EXOSC3-201ENST00000327304 CAMKK2Q96RR4 588 aa23.63■■□□□ 1.37
EXOSC3-201ENST00000327304 RPS6KA4O75676 772 aa23.63■■□□□ 1.37
EXOSC3-201ENST00000327304 EZH2Q15910 746 aaKnown RBP23.63■■□□□ 1.37
EXOSC3-201ENST00000327304 AK7Q96M32 723 aa23.63■■□□□ 1.37
EXOSC3-201ENST00000327304 TBC1D2BQ9UPU7 963 aa23.63■■□□□ 1.37
EXOSC3-201ENST00000327304 ATP10DQ9P241 1426 aa23.62■■□□□ 1.37
EXOSC3-201ENST00000327304 BEND3Q5T5X7 828 aa23.62■■□□□ 1.37
EXOSC3-201ENST00000327304 NPM2Q86SE8 214 aaKnown RBP23.62■■□□□ 1.37
EXOSC3-201ENST00000327304 DZIP3Q86Y13 1208 aaKnown RBP23.62■■□□□ 1.37
EXOSC3-201ENST00000327304 MAP3K15Q6ZN16 1313 aa23.62■■□□□ 1.37
EXOSC3-201ENST00000327304 DEFB132Q7Z7B7 95 aa23.61■■□□□ 1.37
EXOSC3-201ENST00000327304 METTL22Q9BUU2 404 aaPredicted RBP23.61■■□□□ 1.37
EXOSC3-201ENST00000327304 BAG6P46379 1132 aa23.61■■□□□ 1.37
EXOSC3-201ENST00000327304 CHMP4BQ9H444 224 aaKnown RBP23.61■■□□□ 1.37
EXOSC3-201ENST00000327304 MYD88Q99836 296 aa23.6■■□□□ 1.37
EXOSC3-201ENST00000327304 SRCIN1Q9C0H9 1055 aa23.6■■□□□ 1.37
EXOSC3-201ENST00000327304 RTCBQ9Y3I0 505 aaKnown RBP23.6■■□□□ 1.37
EXOSC3-201ENST00000327304 RBM19Q9Y4C8 960 aaKnown RBP23.6■■□□□ 1.37
EXOSC3-201ENST00000327304 IGHDP01880 384 aa23.59■■□□□ 1.37
EXOSC3-201ENST00000327304 PCDHB15Q9Y5E8 787 aa23.59■■□□□ 1.37
EXOSC3-201ENST00000327304 UBR3Q6ZT12 1888 aa23.59■■□□□ 1.37
EXOSC3-201ENST00000327304 ZBTB7BO15156 539 aaPredicted RBP23.58■■□□□ 1.37
EXOSC3-201ENST00000327304 IGKV5-2P06315 115 aa23.58■■□□□ 1.37
EXOSC3-201ENST00000327304 HLFQ16534 295 aa23.58■■□□□ 1.37
EXOSC3-201ENST00000327304 ZNF827Q17R98 1081 aa23.58■■□□□ 1.37
EXOSC3-201ENST00000327304 CWF19L2Q2TBE0 894 aaKnown RBP23.58■■□□□ 1.37
EXOSC3-201ENST00000327304 LINS1Q8NG48 757 aa23.58■■□□□ 1.37
EXOSC3-201ENST00000327304 A0A087WZG4 1122 aa23.57■■□□□ 1.36
EXOSC3-201ENST00000327304 CAMTA2O94983 1202 aa23.57■■□□□ 1.36
EXOSC3-201ENST00000327304 PHF14O94880 888 aa23.56■■□□□ 1.36
EXOSC3-201ENST00000327304 NEXNQ0ZGT2 675 aa23.56■■□□□ 1.36
EXOSC3-201ENST00000327304 CCDC125Q86Z20 511 aa23.56■■□□□ 1.36
EXOSC3-201ENST00000327304 RWDD1Q9H446 243 aaPredicted RBP23.56■■□□□ 1.36
EXOSC3-201ENST00000327304 ZBTB40Q9NUA8 1239 aa23.56■■□□□ 1.36
EXOSC3-201ENST00000327304 ERVV-1B6SEH8 477 aa23.56■■□□□ 1.36
EXOSC3-201ENST00000327304 ATP5J2-PTCD1G3V325 749 aa23.56■■□□□ 1.36
EXOSC3-201ENST00000327304 GIGYF2Q6Y7W6 1299 aaKnown RBP23.56■■□□□ 1.36
EXOSC3-201ENST00000327304 AKT1S1Q96B36 256 aa23.56■■□□□ 1.36
EXOSC3-201ENST00000327304 MEIS3Q99687 375 aa23.56■■□□□ 1.36
EXOSC3-201ENST00000327304 BCORQ6W2J9 1755 aa23.56■■□□□ 1.36
EXOSC3-201ENST00000327304 C4AP0C0L4 1744 aa23.55■■□□□ 1.36
EXOSC3-201ENST00000327304 NEURL1BA8MQ27 555 aa23.55■■□□□ 1.36
EXOSC3-201ENST00000327304 ALDH1L1O75891 902 aa23.55■■□□□ 1.36
EXOSC3-201ENST00000327304 HMGB2P26583 209 aaKnown RBP23.55■■□□□ 1.36
EXOSC3-201ENST00000327304 NUP98P52948 1817 aa23.55■■□□□ 1.36
EXOSC3-201ENST00000327304 ARHGEF1Q92888 912 aaKnown RBP23.54■■□□□ 1.36
EXOSC3-201ENST00000327304 AFDNP55196 1824 aaKnown RBP23.54■■□□□ 1.36
EXOSC3-201ENST00000327304 SCN7AQ01118 1682 aa23.54■■□□□ 1.36
EXOSC3-201ENST00000327304 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.54■■□□□ 1.36
EXOSC3-201ENST00000327304 TCIRG1Q13488 830 aa23.54■■□□□ 1.36
EXOSC3-201ENST00000327304 TUBGCP6Q96RT7 1819 aa23.53■■□□□ 1.36
EXOSC3-201ENST00000327304 TRAPPC3LQ5T215 181 aa23.53■■□□□ 1.36
EXOSC3-201ENST00000327304 USP44Q9H0E7 712 aa23.53■■□□□ 1.36
EXOSC3-201ENST00000327304 SRP68Q9UHB9 627 aaKnown RBP23.53■■□□□ 1.36
EXOSC3-201ENST00000327304 ISCA1Q9BUE6 129 aa23.52■■□□□ 1.36
EXOSC3-201ENST00000327304 NARFQ9UHQ1 456 aa23.52■■□□□ 1.36
EXOSC3-201ENST00000327304 ANKRD36CQ5JPF3 1778 aa23.52■■□□□ 1.36
EXOSC3-201ENST00000327304 ADRA2BP18089 450 aa23.52■■□□□ 1.36
EXOSC3-201ENST00000327304 SSFA2P28290 1259 aa23.52■■□□□ 1.36
EXOSC3-201ENST00000327304 HDAC1Q13547 482 aaPredicted RBP23.52■■□□□ 1.36
EXOSC3-201ENST00000327304 ANO8Q9HCE9 1232 aaPredicted RBP23.52■■□□□ 1.36
EXOSC3-201ENST00000327304 UPF1Q92900 1129 aaKnown RBP eCLIP23.51■■□□□ 1.35
EXOSC3-201ENST00000327304 C1orf115Q9H7X2 142 aa23.51■■□□□ 1.35
EXOSC3-201ENST00000327304 TFCP2L1Q9NZI6 479 aa23.51■■□□□ 1.35
EXOSC3-201ENST00000327304 GPTP24298 496 aa23.5■■□□□ 1.35
EXOSC3-201ENST00000327304 GCKRQ14397 625 aa23.5■■□□□ 1.35
EXOSC3-201ENST00000327304 HSP90AB3PQ58FF7 597 aa23.5■■□□□ 1.35
EXOSC3-201ENST00000327304 USPL1Q5W0Q7 1092 aa23.5■■□□□ 1.35
EXOSC3-201ENST00000327304 BCL2L12Q9HB09 334 aa23.5■■□□□ 1.35
EXOSC3-201ENST00000327304 USP42Q9H9J4 1324 aaKnown RBP23.5■■□□□ 1.35
EXOSC3-201ENST00000327304 RFC4P35249 363 aa23.49■■□□□ 1.35
EXOSC3-201ENST00000327304 IBTKQ9P2D0 1353 aaPredicted RBP23.49■■□□□ 1.35
EXOSC3-201ENST00000327304 ZPR1O75312 459 aa23.49■■□□□ 1.35
EXOSC3-201ENST00000327304 NBPF7P0C2Y1 421 aaPredicted RBP23.48■■□□□ 1.35
EXOSC3-201ENST00000327304 CWC25Q9NXE8 425 aaPredicted RBP23.48■■□□□ 1.35
EXOSC3-201ENST00000327304 C9orf78Q9NZ63 289 aaPredicted RBP23.48■■□□□ 1.35
EXOSC3-201ENST00000327304 GRM8O00222 908 aa23.47■■□□□ 1.35
EXOSC3-201ENST00000327304 GNAI3P08754 354 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms