RNA–Protein interactions for RNA: ENST00000326197.11

SCMH1-201, Transcript of Scm polycomb group protein homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCMH1, Length 3,275 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-201ENST00000326197 KIAA1524Q8TCG1 905 aa12.05□□□□□ -0.48
SCMH1-201ENST00000326197 SPATA32Q96LK8 384 aa12.05□□□□□ -0.48
SCMH1-201ENST00000326197 CPS1P31327 1500 aa12.05□□□□□ -0.48
SCMH1-201ENST00000326197 HSP90B1P14625 803 aaKnown RBP12.05□□□□□ -0.48
SCMH1-201ENST00000326197 CEBPZQ03701 1054 aaKnown RBP12.05□□□□□ -0.48
SCMH1-201ENST00000326197 TYRO3Q06418 890 aa12.05□□□□□ -0.48
SCMH1-201ENST00000326197 EYA1Q99502 592 aa12.05□□□□□ -0.48
SCMH1-201ENST00000326197 MTMR6Q9Y217 621 aa12.05□□□□□ -0.48
SCMH1-201ENST00000326197 SALL3Q9BXA9 1300 aa12.04□□□□□ -0.48
SCMH1-201ENST00000326197 NLRP6P59044 892 aa12.04□□□□□ -0.48
SCMH1-201ENST00000326197 DMTNQ08495 405 aa12.04□□□□□ -0.48
SCMH1-201ENST00000326197 ANO6Q4KMQ2 910 aa12.04□□□□□ -0.48
SCMH1-201ENST00000326197 FBXW7Q969H0 707 aa12.04□□□□□ -0.48
SCMH1-201ENST00000326197 LSG1Q9H089 658 aaKnown RBP12.04□□□□□ -0.48
SCMH1-201ENST00000326197 SH2B1Q9NRF2 756 aaPredicted RBP12.04□□□□□ -0.48
SCMH1-201ENST00000326197 DACT1Q9NYF0 836 aa12.04□□□□□ -0.48
SCMH1-201ENST00000326197 PRR36Q9H6K5 1346 aa12.04□□□□□ -0.48
SCMH1-201ENST00000326197 TNNT1P13805 278 aa12.04□□□□□ -0.48
SCMH1-201ENST00000326197 LRMPQ12912 555 aa12.04□□□□□ -0.48
SCMH1-201ENST00000326197 ADCK5Q3MIX3 580 aa12.04□□□□□ -0.48
SCMH1-201ENST00000326197 METP08581 1390 aa12.04□□□□□ -0.48
SCMH1-201ENST00000326197 H3BQV1 296 aa12.03□□□□□ -0.48
SCMH1-201ENST00000326197 PDCP20941 246 aa12.03□□□□□ -0.48
SCMH1-201ENST00000326197 PTH1RQ03431 593 aa12.03□□□□□ -0.48
SCMH1-201ENST00000326197 IFFO2Q5TF58 517 aa12.03□□□□□ -0.48
SCMH1-201ENST00000326197 CCDC112Q8NEF3 446 aa12.03□□□□□ -0.48
SCMH1-201ENST00000326197 NBPF7P0C2Y1 421 aaPredicted RBP12.03□□□□□ -0.48
SCMH1-201ENST00000326197 LIG1P18858 919 aa12.03□□□□□ -0.48
SCMH1-201ENST00000326197 AACSQ86V21 672 aa12.03□□□□□ -0.48
SCMH1-201ENST00000326197 USHBP1Q8N6Y0 703 aa12.03□□□□□ -0.48
SCMH1-201ENST00000326197 SSH3Q8TE77 659 aa12.03□□□□□ -0.48
SCMH1-201ENST00000326197 SPTLC3Q9NUV7 552 aa12.03□□□□□ -0.48
SCMH1-201ENST00000326197 PODXL2Q9NZ53 605 aa12.03□□□□□ -0.48
SCMH1-201ENST00000326197 PI4KAP2A4QPH2 592 aa12.03□□□□□ -0.48
SCMH1-201ENST00000326197 PI4KAP1Q8N8J0 262 aa12.03□□□□□ -0.48
SCMH1-201ENST00000326197 KCNF1Q9H3M0 494 aa12.03□□□□□ -0.48
SCMH1-201ENST00000326197 HYPKQ9NX55 129 aa12.03□□□□□ -0.48
SCMH1-201ENST00000326197 AOX1Q06278 1338 aa12.03□□□□□ -0.48
SCMH1-201ENST00000326197 AP5Z1O43299 807 aa12.02□□□□□ -0.48
SCMH1-201ENST00000326197 BLOC1S2Q6QNY1 142 aa12.02□□□□□ -0.48
SCMH1-201ENST00000326197 TTC6Q86TZ1 520 aa12.02□□□□□ -0.48
SCMH1-201ENST00000326197 TTC14Q96N46 770 aa12.02□□□□□ -0.48
SCMH1-201ENST00000326197 BECN2A8MW95 431 aa12.02□□□□□ -0.49
SCMH1-201ENST00000326197 ME3Q16798 604 aa12.02□□□□□ -0.49
SCMH1-201ENST00000326197 PI4K2BQ8TCG2 481 aa12.02□□□□□ -0.49
SCMH1-201ENST00000326197 FSD1Q9BTV5 496 aa12.02□□□□□ -0.49
SCMH1-201ENST00000326197 RBM8AQ9Y5S9 174 aaKnown RBP12.02□□□□□ -0.49
SCMH1-201ENST00000326197 CRB1P82279 1406 aa12.02□□□□□ -0.49
SCMH1-201ENST00000326197 ZSCAN20P17040 1043 aaPredicted RBP12.01□□□□□ -0.49
SCMH1-201ENST00000326197 PSMA5P28066 241 aa12.01□□□□□ -0.49
SCMH1-201ENST00000326197 ZNF165P49910 485 aa12.01□□□□□ -0.49
SCMH1-201ENST00000326197 VPS53Q5VIR6 699 aa12.01□□□□□ -0.49
SCMH1-201ENST00000326197 CDC37L1Q7L3B6 337 aa12.01□□□□□ -0.49
SCMH1-201ENST00000326197 ECHDC1Q9NTX5 307 aa12.01□□□□□ -0.49
SCMH1-201ENST00000326197 PPP6R1Q9UPN7 881 aa12.01□□□□□ -0.49
SCMH1-201ENST00000326197 NPHP1O15259 732 aa12.01□□□□□ -0.49
SCMH1-201ENST00000326197 RNF20Q5VTR2 975 aa12.01□□□□□ -0.49
SCMH1-201ENST00000326197 DNAJC25Q9H1X3 360 aa12.01□□□□□ -0.49
SCMH1-201ENST00000326197 CLIP2Q9UDT6 1046 aa12.01□□□□□ -0.49
SCMH1-201ENST00000326197 NRBP1Q9UHY1 535 aa12.01□□□□□ -0.49
SCMH1-201ENST00000326197 PA2G4Q9UQ80 394 aaKnown RBP12.01□□□□□ -0.49
SCMH1-201ENST00000326197 ZRSR1Q15695 479 aaKnown RBP12.01□□□□□ -0.49
SCMH1-201ENST00000326197 DNAAF4Q8WXU2 420 aa12.01□□□□□ -0.49
SCMH1-201ENST00000326197 SLC26A8Q96RN1 970 aa12.01□□□□□ -0.49
SCMH1-201ENST00000326197 GTPBP4Q9BZE4 634 aaKnown RBP12.01□□□□□ -0.49
SCMH1-201ENST00000326197 SIL1Q9H173 461 aa12.01□□□□□ -0.49
SCMH1-201ENST00000326197 TAOK2Q9UL54 1235 aa12.01□□□□□ -0.49
SCMH1-201ENST00000326197 HTATSF1O43719 755 aaKnown RBP12□□□□□ -0.49
SCMH1-201ENST00000326197 TEFQ10587 303 aa12□□□□□ -0.49
SCMH1-201ENST00000326197 FILIP1Q7Z7B0 1213 aa12□□□□□ -0.49
SCMH1-201ENST00000326197 DDX11Q96FC9 970 aa12□□□□□ -0.49
SCMH1-201ENST00000326197 SCAND2PQ9GZW5 306 aaPredicted RBP12□□□□□ -0.49
SCMH1-201ENST00000326197 CCDC8Q9H0W5 538 aaPredicted RBP12□□□□□ -0.49
SCMH1-201ENST00000326197 CBX8Q9HC52 389 aa12□□□□□ -0.49
SCMH1-201ENST00000326197 CCDC9Q9Y3X0 531 aaKnown RBP12□□□□□ -0.49
SCMH1-201ENST00000326197 GTF2F1P35269 517 aaKnown RBP eCLIP12□□□□□ -0.493e-6■■■■□ 25.6
SCMH1-201ENST00000326197 G3BP1Q13283 466 aaKnown RBP eCLIP12□□□□□ -0.49
SCMH1-201ENST00000326197 CHPF2Q9P2E5 772 aa12□□□□□ -0.49
SCMH1-201ENST00000326197 TMEM131LA2VDJ0 1609 aa12□□□□□ -0.49
SCMH1-201ENST00000326197 BOLA2Q9H3K6 86 aa11.99□□□□□ -0.49
SCMH1-201ENST00000326197 CLTCQ00610 1675 aaKnown RBP11.99□□□□□ -0.49
SCMH1-201ENST00000326197 EPB41L2O43491 1005 aaKnown RBP11.99□□□□□ -0.49
SCMH1-201ENST00000326197 CREB3L3Q68CJ9 461 aa11.99□□□□□ -0.49
SCMH1-201ENST00000326197 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.99□□□□□ -0.49
SCMH1-201ENST00000326197 V9GYY5 206 aaPredicted RBP11.99□□□□□ -0.49
SCMH1-201ENST00000326197 UTP14CQ5TAP6 766 aaKnown RBP11.99□□□□□ -0.49
SCMH1-201ENST00000326197 FAM227BQ96M60 508 aa11.99□□□□□ -0.49
SCMH1-201ENST00000326197 TPCN1Q9ULQ1 816 aa11.99□□□□□ -0.49
SCMH1-201ENST00000326197 MRVI1Q9Y6F6 885 aa11.99□□□□□ -0.49
SCMH1-201ENST00000326197 AIMP1Q12904 312 aaKnown RBP11.98□□□□□ -0.49
SCMH1-201ENST00000326197 IL17REQ8NFR9 667 aa11.98□□□□□ -0.49
SCMH1-201ENST00000326197 DDX19AQ9NUU7 478 aaKnown RBP11.98□□□□□ -0.49
SCMH1-201ENST00000326197 TRMT1Q9NXH9 659 aaKnown RBP11.98□□□□□ -0.49
SCMH1-201ENST00000326197 DIP2CQ9Y2E4 1556 aa11.98□□□□□ -0.49
SCMH1-201ENST00000326197 FLT4P35916 1363 aa11.98□□□□□ -0.49
SCMH1-201ENST00000326197 CCDC171Q6TFL3 1326 aa11.98□□□□□ -0.49
SCMH1-201ENST00000326197 LARP1Q6PKG0 1096 aaKnown RBP11.98□□□□□ -0.49
SCMH1-201ENST00000326197 NMIQ13287 307 aaPredicted RBP11.98□□□□□ -0.49
SCMH1-201ENST00000326197 FUCA2Q9BTY2 467 aa11.98□□□□□ -0.49
SCMH1-201ENST00000326197 NAA30Q147X3 362 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms