RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 ATP6V1AP38606 617 aa16.03■□□□□ 0.16
DDX39A-202ENST00000324340 PIP4K2AP48426 406 aaPredicted RBP16.03■□□□□ 0.16
DDX39A-202ENST00000324340 POTEAQ6S8J7 498 aa16.03■□□□□ 0.16
DDX39A-202ENST00000324340 ANKRD13DQ6ZTN6 518 aa16.03■□□□□ 0.16
DDX39A-202ENST00000324340 ALDH1L1O75891 902 aa16.02■□□□□ 0.16
DDX39A-202ENST00000324340 AIMP1Q12904 312 aaKnown RBP16.02■□□□□ 0.16
DDX39A-202ENST00000324340 ITPK1Q13572 414 aa16.02■□□□□ 0.16
DDX39A-202ENST00000324340 PLBD2Q8NHP8 589 aa16.02■□□□□ 0.16
DDX39A-202ENST00000324340 SRCIN1Q9C0H9 1055 aa16.02■□□□□ 0.16
DDX39A-202ENST00000324340 CENPQQ7L2Z9 268 aaPredicted RBP16.01■□□□□ 0.15
DDX39A-202ENST00000324340 LINS1Q8NG48 757 aa16.01■□□□□ 0.15
DDX39A-202ENST00000324340 MEIS3Q99687 375 aa16.01■□□□□ 0.15
DDX39A-202ENST00000324340 METTL22Q9BUU2 404 aaPredicted RBP16.01■□□□□ 0.15
DDX39A-202ENST00000324340 IL6STP40189 918 aaPredicted RBP16■□□□□ 0.15
DDX39A-202ENST00000324340 HDAC1Q13547 482 aaPredicted RBP16■□□□□ 0.15
DDX39A-202ENST00000324340 RIC3Q7Z5B4 369 aa16■□□□□ 0.15
DDX39A-202ENST00000324340 USP44Q9H0E7 712 aa16■□□□□ 0.15
DDX39A-202ENST00000324340 ZBTB1Q9Y2K1 713 aa16■□□□□ 0.15
DDX39A-202ENST00000324340 IGHDP01880 384 aa16■□□□□ 0.15
DDX39A-202ENST00000324340 GNAI3P08754 354 aa16■□□□□ 0.15
DDX39A-202ENST00000324340 INTS5Q6P9B9 1019 aaKnown RBP16■□□□□ 0.15
DDX39A-202ENST00000324340 CCDC87Q9NVE4 849 aa16■□□□□ 0.15
DDX39A-202ENST00000324340 TAF1LQ8IZX4 1826 aa15.99■□□□□ 0.15
DDX39A-202ENST00000324340 MYH14Q7Z406 1995 aaKnown RBP15.99■□□□□ 0.15
DDX39A-202ENST00000324340 CRKLP46109 303 aaKnown RBP15.99■□□□□ 0.15
DDX39A-202ENST00000324340 TTLL7Q6ZT98 887 aa15.99■□□□□ 0.15
DDX39A-202ENST00000324340 RWDD1Q9H446 243 aaPredicted RBP15.99■□□□□ 0.15
DDX39A-202ENST00000324340 CNTNAP4Q9C0A0 1308 aa15.98■□□□□ 0.15
DDX39A-202ENST00000324340 IGKV5-2P06315 115 aa15.98■□□□□ 0.15
DDX39A-202ENST00000324340 EIF5P55010 431 aaKnown RBP15.98■□□□□ 0.15
DDX39A-202ENST00000324340 NEXNQ0ZGT2 675 aa15.98■□□□□ 0.15
DDX39A-202ENST00000324340 UTYO14607 1347 aa15.97■□□□□ 0.15
DDX39A-202ENST00000324340 AFDNP55196 1824 aaKnown RBP15.97■□□□□ 0.15
DDX39A-202ENST00000324340 RPAP2Q8IXW5 612 aaPredicted RBP15.97■□□□□ 0.15
DDX39A-202ENST00000324340 LINC00116Q8NCU8 138 aa15.97■□□□□ 0.15
DDX39A-202ENST00000324340 NEURL1BA8MQ27 555 aa15.96■□□□□ 0.15
DDX39A-202ENST00000324340 GNAI2P04899 355 aa15.96■□□□□ 0.15
DDX39A-202ENST00000324340 CWF19L2Q2TBE0 894 aaKnown RBP15.96■□□□□ 0.15
DDX39A-202ENST00000324340 RC3H1Q5TC82 1133 aaKnown RBP15.96■□□□□ 0.15
DDX39A-202ENST00000324340 SIRT2Q8IXJ6 389 aa15.96■□□□□ 0.15
DDX39A-202ENST00000324340 ANKRD44Q8N8A2 993 aa15.96■□□□□ 0.15
DDX39A-202ENST00000324340 MYD88Q99836 296 aa15.96■□□□□ 0.15
DDX39A-202ENST00000324340 C1orf115Q9H7X2 142 aa15.96■□□□□ 0.15
DDX39A-202ENST00000324340 MAP3K15Q6ZN16 1313 aa15.95■□□□□ 0.14
DDX39A-202ENST00000324340 TRIM37O94972 964 aa15.95■□□□□ 0.14
DDX39A-202ENST00000324340 CEP85Q6P2H3 762 aa15.95■□□□□ 0.14
DDX39A-202ENST00000324340 KIF6Q6ZMV9 814 aa15.95■□□□□ 0.14
DDX39A-202ENST00000324340 CCNL1Q9UK58 526 aaPredicted RBP15.95■□□□□ 0.14
DDX39A-202ENST00000324340 ANKRD36CQ5JPF3 1778 aa15.95■□□□□ 0.14
DDX39A-202ENST00000324340 ERVV-1B6SEH8 477 aa15.94■□□□□ 0.14
DDX39A-202ENST00000324340 NBPF7P0C2Y1 421 aaPredicted RBP15.94■□□□□ 0.14
DDX39A-202ENST00000324340 UBTFL1P0CB47 393 aaPredicted RBP15.94■□□□□ 0.14
DDX39A-202ENST00000324340 GCKRQ14397 625 aa15.94■□□□□ 0.14
DDX39A-202ENST00000324340 NBR1Q14596 966 aa15.94■□□□□ 0.14
DDX39A-202ENST00000324340 C4BP0C0L5 1744 aa15.94■□□□□ 0.14
DDX39A-202ENST00000324340 TNS1Q9HBL0 1735 aaKnown RBP15.94■□□□□ 0.14
DDX39A-202ENST00000324340 RGPD3A6NKT7 1758 aaPredicted RBP15.93■□□□□ 0.14
DDX39A-202ENST00000324340 BCORQ6W2J9 1755 aa15.93■□□□□ 0.14
DDX39A-202ENST00000324340 RGPD4Q7Z3J3 1758 aa15.93■□□□□ 0.14
DDX39A-202ENST00000324340 GRM8O00222 908 aa15.93■□□□□ 0.14
DDX39A-202ENST00000324340 TCIRG1Q13488 830 aa15.93■□□□□ 0.14
DDX39A-202ENST00000324340 SMC5Q8IY18 1101 aa15.93■□□□□ 0.14
DDX39A-202ENST00000324340 ISCA1Q9BUE6 129 aa15.93■□□□□ 0.14
DDX39A-202ENST00000324340 ZBTB3Q9H5J0 574 aa15.93■□□□□ 0.14
DDX39A-202ENST00000324340 HDAC5Q9UQL6 1122 aa15.93■□□□□ 0.14
DDX39A-202ENST00000324340 NUP98P52948 1817 aa15.93■□□□□ 0.14
DDX39A-202ENST00000324340 COL15A1P39059 1388 aa15.92■□□□□ 0.14
DDX39A-202ENST00000324340 TRIM28Q13263 835 aaKnown RBP15.92■□□□□ 0.14
DDX39A-202ENST00000324340 SLC27A3Q5K4L6 730 aa15.92■□□□□ 0.14
DDX39A-202ENST00000324340 GIGYF2Q6Y7W6 1299 aaKnown RBP15.92■□□□□ 0.14
DDX39A-202ENST00000324340 PLSCR1O15162 318 aa15.91■□□□□ 0.14
DDX39A-202ENST00000324340 RGL2O15211 777 aa15.91■□□□□ 0.14
DDX39A-202ENST00000324340 KCNQ4P56696 695 aa15.91■□□□□ 0.14
DDX39A-202ENST00000324340 DZIP3Q86Y13 1208 aaKnown RBP15.91■□□□□ 0.14
DDX39A-202ENST00000324340 CCDC191Q8NCU4 936 aa15.91■□□□□ 0.14
DDX39A-202ENST00000324340 C9orf78Q9NZ63 289 aaPredicted RBP15.91■□□□□ 0.14
DDX39A-202ENST00000324340 ZNF330Q9Y3S2 320 aaPredicted RBP15.91■□□□□ 0.14
DDX39A-202ENST00000324340 LRRFIP2Q9Y608 721 aaKnown RBP15.91■□□□□ 0.14
DDX39A-202ENST00000324340 RPS6KA4O75676 772 aa15.9■□□□□ 0.14
DDX39A-202ENST00000324340 HMGB2P26583 209 aaKnown RBP15.9■□□□□ 0.14
DDX39A-202ENST00000324340 ATP8B2P98198 1209 aa15.9■□□□□ 0.14
DDX39A-202ENST00000324340 HSP90AB3PQ58FF7 597 aa15.9■□□□□ 0.14
DDX39A-202ENST00000324340 NPM2Q86SE8 214 aaKnown RBP15.9■□□□□ 0.14
DDX39A-202ENST00000324340 GCC1Q96CN9 775 aa15.9■□□□□ 0.14
DDX39A-202ENST00000324340 LRRC4BQ9NT99 713 aa15.9■□□□□ 0.14
DDX39A-202ENST00000324340 SCN7AQ01118 1682 aa15.9■□□□□ 0.14
DDX39A-202ENST00000324340 A0A087WZG4 1122 aa15.89■□□□□ 0.13
DDX39A-202ENST00000324340 ATP5J2-PTCD1G3V325 749 aa15.89■□□□□ 0.13
DDX39A-202ENST00000324340 CASP7P55210 303 aa15.89■□□□□ 0.13
DDX39A-202ENST00000324340 MTX1Q13505 466 aa15.89■□□□□ 0.13
DDX39A-202ENST00000324340 CWC25Q9NXE8 425 aaPredicted RBP15.89■□□□□ 0.13
DDX39A-202ENST00000324340 H7C1W4 665 aa15.88■□□□□ 0.13
DDX39A-202ENST00000324340 HMMRO75330 724 aa15.88■□□□□ 0.13
DDX39A-202ENST00000324340 CAMTA2O94983 1202 aa15.88■□□□□ 0.13
DDX39A-202ENST00000324340 HLFQ16534 295 aa15.88■□□□□ 0.13
DDX39A-202ENST00000324340 KAZALD1Q96I82 304 aa15.88■□□□□ 0.13
DDX39A-202ENST00000324340 DCTPP1Q9H773 170 aa15.88■□□□□ 0.13
DDX39A-202ENST00000324340 TBC1D2BQ9UPU7 963 aa15.88■□□□□ 0.13
DDX39A-202ENST00000324340 ZNF34Q8IZ26 560 aa15.87■□□□□ 0.13
DDX39A-202ENST00000324340 SSH3Q8TE77 659 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms