RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 CCDC24Q8N4L8 307 aa16.34■□□□□ 0.21
SRRM1-201ENST00000323848 LINS1Q8NG48 757 aa16.34■□□□□ 0.21
SRRM1-201ENST00000323848 TTC39AQ5SRH9 613 aa16.33■□□□□ 0.21
SRRM1-201ENST00000323848 USP26Q9BXU7 913 aa16.33■□□□□ 0.21
SRRM1-201ENST00000323848 MYO3AQ8NEV4 1616 aa16.33■□□□□ 0.2
SRRM1-201ENST00000323848 PKP1Q13835 747 aa16.33■□□□□ 0.2
SRRM1-201ENST00000323848 CYP46A1Q9Y6A2 500 aa16.33■□□□□ 0.2
SRRM1-201ENST00000323848 CD163L1Q9NR16 1453 aa16.33■□□□□ 0.2
SRRM1-201ENST00000323848 TTLL7Q6ZT98 887 aa16.33■□□□□ 0.2
SRRM1-201ENST00000323848 NGLY1Q96IV0 654 aa16.33■□□□□ 0.2
SRRM1-201ENST00000323848 DDX21Q9NR30 783 aaKnown RBP eCLIP16.33■□□□□ 0.2
SRRM1-201ENST00000323848 ATP2B1P20020 1258 aa16.32■□□□□ 0.2
SRRM1-201ENST00000323848 FAM182BQ5T319 152 aa16.32■□□□□ 0.2
SRRM1-201ENST00000323848 CHST3Q7LGC8 479 aa16.32■□□□□ 0.2
SRRM1-201ENST00000323848 TMX3Q96JJ7 454 aa16.32■□□□□ 0.2
SRRM1-201ENST00000323848 PDRG1Q9NUG6 133 aa16.32■□□□□ 0.2
SRRM1-201ENST00000323848 LAMC1P11047 1609 aa16.32■□□□□ 0.2
SRRM1-201ENST00000323848 RAB11FIP3O75154 756 aa16.32■□□□□ 0.2
SRRM1-201ENST00000323848 GUCY1B3Q02153 619 aa16.32■□□□□ 0.2
SRRM1-201ENST00000323848 METTL24Q5JXM2 366 aa16.32■□□□□ 0.2
SRRM1-201ENST00000323848 PALD1Q9ULE6 856 aa16.32■□□□□ 0.2
SRRM1-201ENST00000323848 ARHGEF10O15013 1369 aa16.32■□□□□ 0.2
SRRM1-201ENST00000323848 MYO5BQ9ULV0 1848 aa16.32■□□□□ 0.2
SRRM1-201ENST00000323848 IL2RBP14784 551 aa16.32■□□□□ 0.2
SRRM1-201ENST00000323848 CHMLP26374 656 aa16.32■□□□□ 0.2
SRRM1-201ENST00000323848 PREX1Q8TCU6 1659 aa16.32■□□□□ 0.2
SRRM1-201ENST00000323848 SLC52A2Q9HAB3 445 aa16.32■□□□□ 0.2
SRRM1-201ENST00000323848 MSNP26038 577 aaKnown RBP16.31■□□□□ 0.2
SRRM1-201ENST00000323848 TFCP2Q12800 502 aa16.31■□□□□ 0.2
SRRM1-201ENST00000323848 SLC4A8Q2Y0W8 1093 aa16.31■□□□□ 0.2
SRRM1-201ENST00000323848 CCDC129Q6ZRS4 1044 aa16.31■□□□□ 0.2
SRRM1-201ENST00000323848 STARD3NLO95772 234 aa16.31■□□□□ 0.2
SRRM1-201ENST00000323848 FAM227BQ96M60 508 aa16.31■□□□□ 0.2
SRRM1-201ENST00000323848 BLOC1S2Q6QNY1 142 aa16.3■□□□□ 0.2
SRRM1-201ENST00000323848 ABCF2Q9UG63 623 aa16.3■□□□□ 0.2
SRRM1-201ENST00000323848 CCDC82Q8N4S0 544 aa16.3■□□□□ 0.2
SRRM1-201ENST00000323848 DCAF5Q96JK2 942 aa16.3■□□□□ 0.2
SRRM1-201ENST00000323848 SIGLEC1Q9BZZ2 1709 aa16.3■□□□□ 0.2
SRRM1-201ENST00000323848 CPLX1O14810 134 aa16.3■□□□□ 0.2
SRRM1-201ENST00000323848 SF3A1Q15459 793 aaKnown RBP16.3■□□□□ 0.2
SRRM1-201ENST00000323848 DNAJC10Q8IXB1 793 aa16.3■□□□□ 0.2
SRRM1-201ENST00000323848 BICD2Q8TD16 824 aa16.3■□□□□ 0.2
SRRM1-201ENST00000323848 MPHOSPH8Q99549 860 aa16.3■□□□□ 0.2
SRRM1-201ENST00000323848 IFIT1P09914 478 aaKnown RBP16.29■□□□□ 0.2
SRRM1-201ENST00000323848 CDK12Q9NYV4 1490 aaPredicted RBP16.29■□□□□ 0.2
SRRM1-201ENST00000323848 PPLO60437 1756 aa16.29■□□□□ 0.2
SRRM1-201ENST00000323848 PHKG2P15735 406 aa16.29■□□□□ 0.2
SRRM1-201ENST00000323848 LDHAL6AQ6ZMR3 332 aa16.29■□□□□ 0.2
SRRM1-201ENST00000323848 C8orf37Q96NL8 207 aa16.29■□□□□ 0.2
SRRM1-201ENST00000323848 NPHP4O75161 1426 aaPredicted RBP16.29■□□□□ 0.2
SRRM1-201ENST00000323848 CCT2P78371 535 aaKnown RBP16.29■□□□□ 0.2
SRRM1-201ENST00000323848 CCDC158Q5M9N0 1113 aa16.29■□□□□ 0.2
SRRM1-201ENST00000323848 TMEM131LA2VDJ0 1609 aa16.29■□□□□ 0.2
SRRM1-201ENST00000323848 ERBB3P21860 1342 aa16.29■□□□□ 0.2
SRRM1-201ENST00000323848 SYCE3A1L190 88 aa16.29■□□□□ 0.2
SRRM1-201ENST00000323848 CWC25Q9NXE8 425 aaPredicted RBP16.29■□□□□ 0.2
SRRM1-201ENST00000323848 BEND3Q5T5X7 828 aa16.28■□□□□ 0.2
SRRM1-201ENST00000323848 LARP1BQ659C4 914 aaKnown RBP16.28■□□□□ 0.2
SRRM1-201ENST00000323848 NFXL1Q6ZNB6 911 aa16.28■□□□□ 0.2
SRRM1-201ENST00000323848 TFIP11Q9UBB9 837 aaKnown RBP16.28■□□□□ 0.2
SRRM1-201ENST00000323848 DBNDD2Q9BQY9 259 aa16.28■□□□□ 0.2
SRRM1-201ENST00000323848 TLR7Q9NYK1 1049 aaKnown RBP16.28■□□□□ 0.2
SRRM1-201ENST00000323848 ZC3H13Q5T200 1668 aaKnown RBP16.28■□□□□ 0.2
SRRM1-201ENST00000323848 RALYLQ86SE5 291 aaKnown RBP16.27■□□□□ 0.2
SRRM1-201ENST00000323848 NMIQ13287 307 aaPredicted RBP16.27■□□□□ 0.2
SRRM1-201ENST00000323848 IFIT5Q13325 482 aaKnown RBP16.27■□□□□ 0.2
SRRM1-201ENST00000323848 ASAP1Q9ULH1 1129 aa16.27■□□□□ 0.2
SRRM1-201ENST00000323848 RAD21O60216 631 aa16.27■□□□□ 0.19
SRRM1-201ENST00000323848 BAG4O95429 457 aaKnown RBP16.27■□□□□ 0.19
SRRM1-201ENST00000323848 CYP27B1O15528 508 aa16.26■□□□□ 0.19
SRRM1-201ENST00000323848 NASPP49321 788 aaPredicted RBP16.26■□□□□ 0.19
SRRM1-201ENST00000323848 PRIM1P49642 420 aaKnown RBP16.26■□□□□ 0.19
SRRM1-201ENST00000323848 SKOR2Q2VWA4 1001 aaPredicted RBP16.26■□□□□ 0.19
SRRM1-201ENST00000323848 PIBF1Q8WXW3 757 aa16.26■□□□□ 0.19
SRRM1-201ENST00000323848 PHF14O94880 888 aa16.26■□□□□ 0.19
SRRM1-201ENST00000323848 EAF2Q96CJ1 260 aaPredicted RBP16.26■□□□□ 0.19
SRRM1-201ENST00000323848 JAG2Q9Y219 1238 aa16.26■□□□□ 0.19
SRRM1-201ENST00000323848 CREBRFQ8IUR6 639 aa16.25■□□□□ 0.19
SRRM1-201ENST00000323848 TRDNQ13061 729 aa16.25■□□□□ 0.19
SRRM1-201ENST00000323848 SLFNL1Q499Z3 407 aa16.25■□□□□ 0.19
SRRM1-201ENST00000323848 SYAP1Q96A49 352 aaPredicted RBP16.25■□□□□ 0.19
SRRM1-201ENST00000323848 RBM8AQ9Y5S9 174 aaKnown RBP16.25■□□□□ 0.19
SRRM1-201ENST00000323848 CAMK4Q16566 473 aa16.24■□□□□ 0.19
SRRM1-201ENST00000323848 FAM173BQ6P4H8 233 aa16.24■□□□□ 0.19
SRRM1-201ENST00000323848 SEC62Q99442 399 aaKnown RBP16.24■□□□□ 0.19
SRRM1-201ENST00000323848 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.24■□□□□ 0.19
SRRM1-201ENST00000323848 HCLS1P14317 486 aaPredicted RBP16.24■□□□□ 0.19
SRRM1-201ENST00000323848 GCKRQ14397 625 aa16.24■□□□□ 0.19
SRRM1-201ENST00000323848 CCDC144CPQ8IYA2 1237 aa16.24■□□□□ 0.19
SRRM1-201ENST00000323848 MAP2P11137 1827 aaKnown RBP16.24■□□□□ 0.19
SRRM1-201ENST00000323848 GRPEL1Q9HAV7 217 aa16.24■□□□□ 0.19
SRRM1-201ENST00000323848 RBM25P49756 843 aaKnown RBP16.23■□□□□ 0.19
SRRM1-201ENST00000323848 ALDH1L1O75891 902 aa16.23■□□□□ 0.19
SRRM1-201ENST00000323848 PSMA5P28066 241 aa16.23■□□□□ 0.19
SRRM1-201ENST00000323848 ATP6V1AP38606 617 aa16.23■□□□□ 0.19
SRRM1-201ENST00000323848 MYOM1P52179 1685 aa16.23■□□□□ 0.19
SRRM1-201ENST00000323848 BRINP3Q76B58 766 aa16.23■□□□□ 0.19
SRRM1-201ENST00000323848 PKNOX2Q96KN3 472 aa16.23■□□□□ 0.19
SRRM1-201ENST00000323848 UBAP1LF5GYI3 381 aa16.22■□□□□ 0.19
SRRM1-201ENST00000323848 SYNE4Q8N205 404 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms