RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 KIF3CO14782 793 aa23.28■■□□□ 1.32
TPM1-203ENST00000317516 NEUROD2Q15784 382 aa23.28■■□□□ 1.32
TPM1-203ENST00000317516 KIF6Q6ZMV9 814 aa23.28■■□□□ 1.32
TPM1-203ENST00000317516 CCDC146Q8IYE0 955 aa23.28■■□□□ 1.32
TPM1-203ENST00000317516 LMNB1P20700 586 aa23.27■■□□□ 1.32
TPM1-203ENST00000317516 STYK1Q6J9G0 422 aa23.27■■□□□ 1.32
TPM1-203ENST00000317516 MASTLQ96GX5 879 aa23.27■■□□□ 1.32
TPM1-203ENST00000317516 ADAMTS8Q9UP79 889 aa23.27■■□□□ 1.32
TPM1-203ENST00000317516 BRCA1P38398 1863 aaKnown RBP23.27■■□□□ 1.32
TPM1-203ENST00000317516 ERBB4Q15303 1308 aa23.27■■□□□ 1.32
TPM1-203ENST00000317516 KDM2BQ8NHM5 1336 aa23.27■■□□□ 1.32
TPM1-203ENST00000317516 AFDNP55196 1824 aaKnown RBP23.26■■□□□ 1.31
TPM1-203ENST00000317516 SCN7AQ01118 1682 aa23.26■■□□□ 1.31
TPM1-203ENST00000317516 SRGNP10124 158 aa23.26■■□□□ 1.31
TPM1-203ENST00000317516 MYL6BP14649 208 aa23.26■■□□□ 1.31
TPM1-203ENST00000317516 GTF2E1P29083 439 aaPredicted RBP23.26■■□□□ 1.31
TPM1-203ENST00000317516 ARFGEF1Q9Y6D6 1849 aa23.25■■□□□ 1.31
TPM1-203ENST00000317516 HLFQ16534 295 aa23.25■■□□□ 1.31
TPM1-203ENST00000317516 ZC3H4Q9UPT8 1303 aaKnown RBP23.25■■□□□ 1.31
TPM1-203ENST00000317516 RASSF7Q02833 373 aa23.24■■□□□ 1.31
TPM1-203ENST00000317516 MAP3K15Q6ZN16 1313 aa23.24■■□□□ 1.31
TPM1-203ENST00000317516 FAM177BA6PVY3 158 aa23.23■■□□□ 1.31
TPM1-203ENST00000317516 C21orf2O43822 256 aa23.23■■□□□ 1.31
TPM1-203ENST00000317516 TOMM70O94826 608 aa23.23■■□□□ 1.31
TPM1-203ENST00000317516 EIF2S2P20042 333 aaKnown RBP23.23■■□□□ 1.31
TPM1-203ENST00000317516 SOGA3Q5TF21 947 aa23.23■■□□□ 1.31
TPM1-203ENST00000317516 NYXQ9GZU5 481 aa23.23■■□□□ 1.31
TPM1-203ENST00000317516 C16orf71Q8IYS4 520 aaPredicted RBP23.22■■□□□ 1.31
TPM1-203ENST00000317516 NMRK2Q9NPI5 230 aa23.22■■□□□ 1.31
TPM1-203ENST00000317516 ZNF219Q9P2Y4 722 aaPredicted RBP23.22■■□□□ 1.31
TPM1-203ENST00000317516 KLRG2A4D1S0 409 aaPredicted RBP23.21■■□□□ 1.31
TPM1-203ENST00000317516 NPR1P16066 1061 aa23.21■■□□□ 1.31
TPM1-203ENST00000317516 TTLL7Q6ZT98 887 aa23.21■■□□□ 1.31
TPM1-203ENST00000317516 DLG5Q8TDM6 1919 aa23.21■■□□□ 1.31
TPM1-203ENST00000317516 CHL1O00533 1208 aa23.2■■□□□ 1.3
TPM1-203ENST00000317516 HSPA6P17066 643 aa23.2■■□□□ 1.3
TPM1-203ENST00000317516 PRPF40BQ6NWY9 871 aaKnown RBP23.2■■□□□ 1.3
TPM1-203ENST00000317516 LAS1LQ9Y4W2 734 aaKnown RBP23.2■■□□□ 1.3
TPM1-203ENST00000317516 NFKBIEO00221 500 aa23.19■■□□□ 1.3
TPM1-203ENST00000317516 ZBTB3Q9H5J0 574 aa23.19■■□□□ 1.3
TPM1-203ENST00000317516 TRIM35Q9UPQ4 493 aa23.19■■□□□ 1.3
TPM1-203ENST00000317516 KDM3BQ7LBC6 1761 aa23.18■■□□□ 1.3
TPM1-203ENST00000317516 ALDH1B1P30837 517 aa23.17■■□□□ 1.3
TPM1-203ENST00000317516 GIGYF2Q6Y7W6 1299 aaKnown RBP23.17■■□□□ 1.3
TPM1-203ENST00000317516 TAOK3Q9H2K8 898 aa23.17■■□□□ 1.3
TPM1-203ENST00000317516 BCORQ6W2J9 1755 aa23.17■■□□□ 1.3
TPM1-203ENST00000317516 GLTPD2A6NH11 291 aa23.16■■□□□ 1.3
TPM1-203ENST00000317516 DPY19L2Q6NUT2 758 aa23.16■■□□□ 1.3
TPM1-203ENST00000317516 RRAGCQ9HB90 399 aa23.16■■□□□ 1.3
TPM1-203ENST00000317516 LTBP3Q9NS15 1303 aa23.15■■□□□ 1.3
TPM1-203ENST00000317516 GPTP24298 496 aa23.15■■□□□ 1.3
TPM1-203ENST00000317516 PRELPP51888 382 aa23.15■■□□□ 1.3
TPM1-203ENST00000317516 PDIA6Q15084 440 aa23.15■■□□□ 1.3
TPM1-203ENST00000317516 ERFEQ4G0M1 354 aa23.15■■□□□ 1.3
TPM1-203ENST00000317516 PPP1R42Q7Z4L9 355 aa23.15■■□□□ 1.3
TPM1-203ENST00000317516 RBM46Q8TBY0 533 aaKnown RBP23.15■■□□□ 1.3
TPM1-203ENST00000317516 CALD1Q05682 793 aaKnown RBP23.14■■□□□ 1.29
TPM1-203ENST00000317516 PARP10Q53GL7 1025 aa23.14■■□□□ 1.29
TPM1-203ENST00000317516 CCDC93Q567U6 631 aa23.14■■□□□ 1.29
TPM1-203ENST00000317516 ZNF34Q8IZ26 560 aa23.14■■□□□ 1.29
TPM1-203ENST00000317516 CFAP44Q96MT7 982 aa23.14■■□□□ 1.29
TPM1-203ENST00000317516 DLEC1Q9Y238 1755 aa23.14■■□□□ 1.29
TPM1-203ENST00000317516 SUSD4Q5VX71 490 aa23.13■■□□□ 1.29
TPM1-203ENST00000317516 LRP10Q7Z4F1 713 aa23.13■■□□□ 1.29
TPM1-203ENST00000317516 NUTM1Q86Y26 1132 aa23.13■■□□□ 1.29
TPM1-203ENST00000317516 C7orf43Q8WVR3 580 aa23.13■■□□□ 1.29
TPM1-203ENST00000317516 NECTIN2Q92692 538 aa23.13■■□□□ 1.29
TPM1-203ENST00000317516 LAMB4A4D0S4 1761 aa23.13■■□□□ 1.29
TPM1-203ENST00000317516 APAF1O14727 1248 aa23.12■■□□□ 1.29
TPM1-203ENST00000317516 HOXB7P09629 217 aa23.12■■□□□ 1.29
TPM1-203ENST00000317516 VEGFAP15692 232 aaPredicted RBP23.12■■□□□ 1.29
TPM1-203ENST00000317516 HSP90AB3PQ58FF7 597 aa23.12■■□□□ 1.29
TPM1-203ENST00000317516 COPS6Q7L5N1 327 aa23.12■■□□□ 1.29
TPM1-203ENST00000317516 ANKRD31Q8N7Z5 1873 aa23.12■■□□□ 1.29
TPM1-203ENST00000317516 DDX21Q9NR30 783 aaKnown RBP eCLIP23.12■■□□□ 1.29
TPM1-203ENST00000317516 IBTKQ9P2D0 1353 aaPredicted RBP23.12■■□□□ 1.29
TPM1-203ENST00000317516 ANXA1P04083 346 aa23.11■■□□□ 1.29
TPM1-203ENST00000317516 PROSER3Q2NL68 480 aa23.11■■□□□ 1.29
TPM1-203ENST00000317516 RTKN2Q8IZC4 609 aa23.11■■□□□ 1.29
TPM1-203ENST00000317516 FSTL1Q12841 308 aa23.1■■□□□ 1.29
TPM1-203ENST00000317516 AIMP1Q12904 312 aaKnown RBP23.1■■□□□ 1.29
TPM1-203ENST00000317516 CRY2Q49AN0 593 aa23.1■■□□□ 1.29
TPM1-203ENST00000317516 RPGRQ92834 1020 aaKnown RBP23.1■■□□□ 1.29
TPM1-203ENST00000317516 UBN2Q6ZU65 1347 aa23.09■■□□□ 1.29
TPM1-203ENST00000317516 APLP1P51693 650 aa23.09■■□□□ 1.29
TPM1-203ENST00000317516 KRT24Q2M2I5 525 aa23.09■■□□□ 1.29
TPM1-203ENST00000317516 HDGFL1Q5TGJ6 251 aa23.09■■□□□ 1.29
TPM1-203ENST00000317516 XAGE3Q8WTP9 111 aa23.09■■□□□ 1.29
TPM1-203ENST00000317516 UTP14AQ9BVJ6 771 aaKnown RBP23.09■■□□□ 1.29
TPM1-203ENST00000317516 DBF4Q9UBU7 674 aaPredicted RBP23.08■■□□□ 1.29
TPM1-203ENST00000317516 NTSR2O95665 410 aa23.07■■□□□ 1.28
TPM1-203ENST00000317516 GNAI1P63096 354 aa23.07■■□□□ 1.28
TPM1-203ENST00000317516 FKBP4Q02790 459 aaKnown RBP eCLIP23.07■■□□□ 1.28
TPM1-203ENST00000317516 CC2D2BQ6DHV5 1058 aa23.07■■□□□ 1.28
TPM1-203ENST00000317516 RBM17Q96I25 401 aaKnown RBP23.07■■□□□ 1.28
TPM1-203ENST00000317516 NLRP3Q96P20 1036 aa23.07■■□□□ 1.28
TPM1-203ENST00000317516 ABCC12Q96J65 1359 aa23.06■■□□□ 1.28
TPM1-203ENST00000317516 ZNF316A6NFI3 1004 aaPredicted RBP23.06■■□□□ 1.28
TPM1-203ENST00000317516 HOXA10P31260 410 aaPredicted RBP23.06■■□□□ 1.28
TPM1-203ENST00000317516 DUSP27Q5VZP5 1158 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms