RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 ZDHHC9Q9Y397 364 aa13.98□□□□□ -0.17
PTPN2-201ENST00000309660 CHMP3Q9Y3E7 222 aa13.98□□□□□ -0.17
PTPN2-201ENST00000309660 SGSM2O43147 1006 aa13.98□□□□□ -0.17
PTPN2-201ENST00000309660 IFNL2Q8IZJ0 200 aa13.98□□□□□ -0.17
PTPN2-201ENST00000309660 BOLA2Q9H3K6 86 aa13.98□□□□□ -0.17
PTPN2-201ENST00000309660 ZNF330Q9Y3S2 320 aaPredicted RBP13.97□□□□□ -0.17
PTPN2-201ENST00000309660 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.97□□□□□ -0.17
PTPN2-201ENST00000309660 MCM2P49736 904 aa13.97□□□□□ -0.17
PTPN2-201ENST00000309660 KLHL40Q2TBA0 621 aa13.97□□□□□ -0.17
PTPN2-201ENST00000309660 GDPD2Q9HCC8 539 aa13.97□□□□□ -0.17
PTPN2-201ENST00000309660 CABP4P57796 275 aa13.96□□□□□ -0.17
PTPN2-201ENST00000309660 RASEFQ8IZ41 740 aa13.96□□□□□ -0.17
PTPN2-201ENST00000309660 TRIM44Q96DX7 344 aaPredicted RBP13.96□□□□□ -0.17
PTPN2-201ENST00000309660 IGKV5-2P06315 115 aa13.96□□□□□ -0.17
PTPN2-201ENST00000309660 LARP1Q6PKG0 1096 aaKnown RBP13.96□□□□□ -0.17
PTPN2-201ENST00000309660 RRAGDQ9NQL2 400 aaPredicted RBP13.96□□□□□ -0.17
PTPN2-201ENST00000309660 TLR7Q9NYK1 1049 aaKnown RBP13.96□□□□□ -0.17
PTPN2-201ENST00000309660 HDAC5Q9UQL6 1122 aa13.96□□□□□ -0.17
PTPN2-201ENST00000309660 AOX1Q06278 1338 aa13.96□□□□□ -0.17
PTPN2-201ENST00000309660 HSPA4P34932 840 aa13.96□□□□□ -0.18
PTPN2-201ENST00000309660 ANAPC15P60006 121 aa13.96□□□□□ -0.18
PTPN2-201ENST00000309660 PRPF40BQ6NWY9 871 aaKnown RBP13.96□□□□□ -0.18
PTPN2-201ENST00000309660 FAM43AQ8N2R8 423 aa13.96□□□□□ -0.18
PTPN2-201ENST00000309660 LMBRD1Q9NUN5 540 aa13.96□□□□□ -0.18
PTPN2-201ENST00000309660 CASTP20810 708 aaKnown RBP13.95□□□□□ -0.18
PTPN2-201ENST00000309660 PDIA6Q15084 440 aa13.95□□□□□ -0.18
PTPN2-201ENST00000309660 UBE3BQ7Z3V4 1068 aa13.95□□□□□ -0.18
PTPN2-201ENST00000309660 EAF2Q96CJ1 260 aaPredicted RBP13.95□□□□□ -0.18
PTPN2-201ENST00000309660 CYP27B1O15528 508 aa13.95□□□□□ -0.18
PTPN2-201ENST00000309660 CYP2E1P05181 493 aaPredicted RBP13.95□□□□□ -0.18
PTPN2-201ENST00000309660 ERC1Q8IUD2 1116 aa13.95□□□□□ -0.18
PTPN2-201ENST00000309660 KAZALD1Q96I82 304 aa13.95□□□□□ -0.18
PTPN2-201ENST00000309660 SNX14Q9Y5W7 946 aa13.95□□□□□ -0.18
PTPN2-201ENST00000309660 ANKRD13DQ6ZTN6 518 aa13.95□□□□□ -0.18
PTPN2-201ENST00000309660 PRDM11Q9NQV5 511 aa13.95□□□□□ -0.18
PTPN2-201ENST00000309660 RAD50Q92878 1312 aa13.95□□□□□ -0.18
PTPN2-201ENST00000309660 CACNA1FO60840 1977 aa13.94□□□□□ -0.18
PTPN2-201ENST00000309660 SASH1O94885 1247 aa13.94□□□□□ -0.18
PTPN2-201ENST00000309660 PTH1RQ03431 593 aa13.94□□□□□ -0.18
PTPN2-201ENST00000309660 TOM1L2Q6ZVM7 507 aa13.94□□□□□ -0.18
PTPN2-201ENST00000309660 FSD1Q9BTV5 496 aa13.94□□□□□ -0.18
PTPN2-201ENST00000309660 NDUFB9Q9Y6M9 179 aa13.94□□□□□ -0.18
PTPN2-201ENST00000309660 NCAPD2Q15021 1401 aa13.94□□□□□ -0.18
PTPN2-201ENST00000309660 EPHA10Q5JZY3 1008 aa13.94□□□□□ -0.18
PTPN2-201ENST00000309660 RUFY2Q8WXA3 655 aa13.94□□□□□ -0.18
PTPN2-201ENST00000309660 ANP32BQ92688 251 aaKnown RBP13.94□□□□□ -0.18
PTPN2-201ENST00000309660 FAM227BQ96M60 508 aa13.94□□□□□ -0.18
PTPN2-201ENST00000309660 CADPS2Q86UW7 1296 aa13.94□□□□□ -0.18
PTPN2-201ENST00000309660 EDC3Q96F86 508 aaKnown RBP13.94□□□□□ -0.18
PTPN2-201ENST00000309660 JAKMIP1Q96N16 626 aaKnown RBP13.94□□□□□ -0.18
PTPN2-201ENST00000309660 LSG1Q9H089 658 aaKnown RBP13.94□□□□□ -0.18
PTPN2-201ENST00000309660 STRN4Q9NRL3 753 aa13.94□□□□□ -0.18
PTPN2-201ENST00000309660 TTC41PQ6P2S7 1318 aa13.93□□□□□ -0.18
PTPN2-201ENST00000309660 NEURL1BA8MQ27 555 aa13.93□□□□□ -0.18
PTPN2-201ENST00000309660 SNRPA1P09661 255 aaKnown RBP13.93□□□□□ -0.18
PTPN2-201ENST00000309660 NASPP49321 788 aaPredicted RBP13.93□□□□□ -0.18
PTPN2-201ENST00000309660 AK2P54819 239 aa13.93□□□□□ -0.18
PTPN2-201ENST00000309660 MTX1Q13505 466 aa13.93□□□□□ -0.18
PTPN2-201ENST00000309660 ANO8Q9HCE9 1232 aaPredicted RBP13.93□□□□□ -0.18
PTPN2-201ENST00000309660 GCKRQ14397 625 aa13.92□□□□□ -0.18
PTPN2-201ENST00000309660 ZSCAN23Q3MJ62 389 aa13.92□□□□□ -0.18
PTPN2-201ENST00000309660 FMNL2Q96PY5 1086 aa13.92□□□□□ -0.18
PTPN2-201ENST00000309660 NSFL1CQ9UNZ2 370 aaKnown RBP13.92□□□□□ -0.18
PTPN2-201ENST00000309660 TCEANC2Q96MN5 208 aa13.92□□□□□ -0.18
PTPN2-201ENST00000309660 MED1Q15648 1581 aaPredicted RBP13.92□□□□□ -0.18
PTPN2-201ENST00000309660 MEGF6O75095 1541 aa13.92□□□□□ -0.18
PTPN2-201ENST00000309660 A0A087WZG4 1122 aa13.92□□□□□ -0.18
PTPN2-201ENST00000309660 GPT2Q8TD30 523 aa13.92□□□□□ -0.18
PTPN2-201ENST00000309660 DCAF5Q96JK2 942 aa13.92□□□□□ -0.18
PTPN2-201ENST00000309660 KDM6AO15550 1401 aaPredicted RBP13.92□□□□□ -0.18
PTPN2-201ENST00000309660 ADCK5Q3MIX3 580 aa13.91□□□□□ -0.18
PTPN2-201ENST00000309660 CLEC17AQ6ZS10 378 aa13.91□□□□□ -0.18
PTPN2-201ENST00000309660 METTL22Q9BUU2 404 aaPredicted RBP13.91□□□□□ -0.18
PTPN2-201ENST00000309660 SYCE3A1L190 88 aa13.91□□□□□ -0.18
PTPN2-201ENST00000309660 NMIQ13287 307 aaPredicted RBP13.91□□□□□ -0.18
PTPN2-201ENST00000309660 EVI5LQ96CN4 794 aa13.91□□□□□ -0.18
PTPN2-201ENST00000309660 DNAJC2Q99543 621 aaKnown RBP13.91□□□□□ -0.18
PTPN2-201ENST00000309660 SLIT3O75094 1523 aa13.91□□□□□ -0.18
PTPN2-201ENST00000309660 USP54Q70EL1 1684 aa13.9□□□□□ -0.18
PTPN2-201ENST00000309660 CUL4AQ13619 759 aa13.9□□□□□ -0.18
PTPN2-201ENST00000309660 CCDC83Q8IWF9 413 aa13.9□□□□□ -0.18
PTPN2-201ENST00000309660 RNF214Q8ND24 703 aa13.9□□□□□ -0.18
PTPN2-201ENST00000309660 ISY1Q9ULR0 285 aaKnown RBP13.9□□□□□ -0.18
PTPN2-201ENST00000309660 HEG1Q9ULI3 1381 aa13.9□□□□□ -0.18
PTPN2-201ENST00000309660 BRD1O95696 1058 aa13.89□□□□□ -0.19
PTPN2-201ENST00000309660 ZKSCAN1P17029 563 aaPredicted RBP13.89□□□□□ -0.19
PTPN2-201ENST00000309660 SMC3Q9UQE7 1217 aa13.89□□□□□ -0.19
PTPN2-201ENST00000309660 ZNF142P52746 1687 aaPredicted RBP13.89□□□□□ -0.19
PTPN2-201ENST00000309660 KDM3BQ7LBC6 1761 aa13.89□□□□□ -0.19
PTPN2-201ENST00000309660 RGPD5Q99666 1765 aa13.89□□□□□ -0.19
PTPN2-201ENST00000309660 PRIM1P49642 420 aaKnown RBP13.89□□□□□ -0.19
PTPN2-201ENST00000309660 ZBTB3Q9H5J0 574 aa13.89□□□□□ -0.19
PTPN2-201ENST00000309660 RUFY3Q7L099 469 aa13.89□□□□□ -0.19
PTPN2-201ENST00000309660 PDRG1Q9NUG6 133 aa13.89□□□□□ -0.19
PTPN2-201ENST00000309660 RBM8AQ9Y5S9 174 aaKnown RBP13.89□□□□□ -0.19
PTPN2-201ENST00000309660 MST1RQ04912 1400 aa13.89□□□□□ -0.19
PTPN2-201ENST00000309660 ADAMTSL3P82987 1691 aa13.89□□□□□ -0.19
PTPN2-201ENST00000309660 LMO7Q8WWI1 1683 aa13.89□□□□□ -0.19
PTPN2-201ENST00000309660 LARGE1O95461 756 aa13.88□□□□□ -0.19
PTPN2-201ENST00000309660 INTS4Q96HW7 963 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms