RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 PLEKHF1Q96S99 279 aa27.2■■□□□ 1.94
RER1-201ENST00000306256 C16orf71Q8IYS4 520 aaPredicted RBP27.19■■□□□ 1.94
RER1-201ENST00000306256 THUMPD2Q9BTF0 503 aaKnown RBP27.19■■□□□ 1.94
RER1-201ENST00000306256 RRAGCQ9HB90 399 aa27.19■■□□□ 1.94
RER1-201ENST00000306256 ST5P78524 1137 aa27.18■■□□□ 1.94
RER1-201ENST00000306256 PDZRN3Q9UPQ7 1066 aa27.18■■□□□ 1.94
RER1-201ENST00000306256 C21orf2O43822 256 aa27.17■■□□□ 1.94
RER1-201ENST00000306256 NFE2L2Q16236 605 aa27.17■■□□□ 1.94
RER1-201ENST00000306256 RBM46Q8TBY0 533 aaKnown RBP27.17■■□□□ 1.94
RER1-201ENST00000306256 CLEC4GQ6UXB4 293 aa27.16■■□□□ 1.94
RER1-201ENST00000306256 NBPF5PQ86XG9 351 aaPredicted RBP27.16■■□□□ 1.94
RER1-201ENST00000306256 ZNF652Q9Y2D9 606 aa27.16■■□□□ 1.94
RER1-201ENST00000306256 NUP98P52948 1817 aa27.16■■□□□ 1.94
RER1-201ENST00000306256 WDR90Q96KV7 1748 aa27.16■■□□□ 1.94
RER1-201ENST00000306256 ZC3H4Q9UPT8 1303 aaKnown RBP27.16■■□□□ 1.94
RER1-201ENST00000306256 APLP1P51693 650 aa27.15■■□□□ 1.94
RER1-201ENST00000306256 MAPK8IP3Q9UPT6 1336 aa27.14■■□□□ 1.93
RER1-201ENST00000306256 SRGNP10124 158 aa27.13■■□□□ 1.93
RER1-201ENST00000306256 NIP7Q9Y221 180 aaKnown RBP eCLIP27.13■■□□□ 1.93
RER1-201ENST00000306256 STYK1Q6J9G0 422 aa27.12■■□□□ 1.93
RER1-201ENST00000306256 PNISRQ8TF01 805 aaKnown RBP27.12■■□□□ 1.93
RER1-201ENST00000306256 CNKSR1Q969H4 720 aa27.12■■□□□ 1.93
RER1-201ENST00000306256 FAM177BA6PVY3 158 aa27.11■■□□□ 1.93
RER1-201ENST00000306256 HLFQ16534 295 aa27.11■■□□□ 1.93
RER1-201ENST00000306256 PRPF40BQ6NWY9 871 aaKnown RBP27.11■■□□□ 1.93
RER1-201ENST00000306256 NGEFQ8N5V2 710 aa27.11■■□□□ 1.93
RER1-201ENST00000306256 GLTPD2A6NH11 291 aa27.1■■□□□ 1.93
RER1-201ENST00000306256 EIF4A1P60842 406 aaKnown RBP27.1■■□□□ 1.93
RER1-201ENST00000306256 MASTLQ96GX5 879 aa27.1■■□□□ 1.93
RER1-201ENST00000306256 PNNQ9H307 717 aaKnown RBP27.09■■□□□ 1.93
RER1-201ENST00000306256 RGL2O15211 777 aa27.07■■□□□ 1.92
RER1-201ENST00000306256 FSTL1Q12841 308 aa27.07■■□□□ 1.92
RER1-201ENST00000306256 RALBP1Q15311 655 aa27.07■■□□□ 1.92
RER1-201ENST00000306256 TAOK3Q9H2K8 898 aa27.07■■□□□ 1.92
RER1-201ENST00000306256 RRP7AQ9Y3A4 280 aaKnown RBP27.07■■□□□ 1.92
RER1-201ENST00000306256 HTRA3P83110 453 aa27.06■■□□□ 1.92
RER1-201ENST00000306256 ERFEQ4G0M1 354 aa27.06■■□□□ 1.92
RER1-201ENST00000306256 TPTE2Q6XPS3 522 aa27.06■■□□□ 1.92
RER1-201ENST00000306256 DDX10Q13206 875 aaKnown RBP27.05■■□□□ 1.92
RER1-201ENST00000306256 LTBP3Q9NS15 1303 aa27.05■■□□□ 1.92
RER1-201ENST00000306256 MYL6BP14649 208 aa27.04■■□□□ 1.92
RER1-201ENST00000306256 VEGFAP15692 232 aaPredicted RBP27.04■■□□□ 1.92
RER1-201ENST00000306256 NPR1P16066 1061 aa27.04■■□□□ 1.92
RER1-201ENST00000306256 TTLL7Q6ZT98 887 aa27.04■■□□□ 1.92
RER1-201ENST00000306256 MAP3K15Q6ZN16 1313 aa27.03■■□□□ 1.92
RER1-201ENST00000306256 DNAJC5GQ8N7S2 189 aa27.03■■□□□ 1.92
RER1-201ENST00000306256 SMC1BQ8NDV3 1235 aa27.03■■□□□ 1.92
RER1-201ENST00000306256 KLRG2A4D1S0 409 aaPredicted RBP27.02■■□□□ 1.92
RER1-201ENST00000306256 RIPK4P57078 832 aa27.02■■□□□ 1.92
RER1-201ENST00000306256 SOGA3Q5TF21 947 aa27.02■■□□□ 1.92
RER1-201ENST00000306256 TSPYL4Q9UJ04 414 aa27.02■■□□□ 1.92
RER1-201ENST00000306256 ABCC12Q96J65 1359 aa27.01■■□□□ 1.91
RER1-201ENST00000306256 GTF2E1P29083 439 aaPredicted RBP27.01■■□□□ 1.91
RER1-201ENST00000306256 KIF6Q6ZMV9 814 aa27.01■■□□□ 1.91
RER1-201ENST00000306256 C7orf43Q8WVR3 580 aa27.01■■□□□ 1.91
RER1-201ENST00000306256 ERVV-1B6SEH8 477 aa27■■□□□ 1.91
RER1-201ENST00000306256 DPY19L2Q6NUT2 758 aa27■■□□□ 1.91
RER1-201ENST00000306256 OLFM4Q6UX06 510 aa27■■□□□ 1.91
RER1-201ENST00000306256 ZBTB3Q9H5J0 574 aa27■■□□□ 1.91
RER1-201ENST00000306256 POTECB2RU33 542 aa26.99■■□□□ 1.91
RER1-201ENST00000306256 GPTP24298 496 aa26.99■■□□□ 1.91
RER1-201ENST00000306256 CCDC93Q567U6 631 aa26.99■■□□□ 1.91
RER1-201ENST00000306256 NUTM1Q86Y26 1132 aa26.99■■□□□ 1.91
RER1-201ENST00000306256 MYBBP1AQ9BQG0 1328 aaKnown RBP26.98■■□□□ 1.91
RER1-201ENST00000306256 TMPOP42166 694 aaKnown RBP26.98■■□□□ 1.91
RER1-201ENST00000306256 CCDC146Q8IYE0 955 aa26.97■■□□□ 1.91
RER1-201ENST00000306256 UBN2Q6ZU65 1347 aa26.96■■□□□ 1.91
RER1-201ENST00000306256 NYXQ9GZU5 481 aa26.96■■□□□ 1.91
RER1-201ENST00000306256 ERBB4Q15303 1308 aa26.95■■□□□ 1.91
RER1-201ENST00000306256 EIF2S2P20042 333 aaKnown RBP26.95■■□□□ 1.9
RER1-201ENST00000306256 DDNO94850 711 aaPredicted RBP26.94■■□□□ 1.9
RER1-201ENST00000306256 ANXA1P04083 346 aa26.93■■□□□ 1.9
RER1-201ENST00000306256 LMOD3Q0VAK6 560 aa26.93■■□□□ 1.9
RER1-201ENST00000306256 NEUROD2Q15784 382 aa26.93■■□□□ 1.9
RER1-201ENST00000306256 PROSER3Q2NL68 480 aa26.93■■□□□ 1.9
RER1-201ENST00000306256 ZNF277Q9NRM2 450 aaPredicted RBP26.93■■□□□ 1.9
RER1-201ENST00000306256 ANKRD36CQ5JPF3 1778 aa26.92■■□□□ 1.9
RER1-201ENST00000306256 FKBP4Q02790 459 aaKnown RBP eCLIP26.92■■□□□ 1.94e-6■■□□□ 13.6
RER1-201ENST00000306256 PDIA6Q15084 440 aa26.92■■□□□ 1.9
RER1-201ENST00000306256 CRY2Q49AN0 593 aa26.92■■□□□ 1.9
RER1-201ENST00000306256 SUSD4Q5VX71 490 aa26.92■■□□□ 1.9
RER1-201ENST00000306256 KLRG1Q96E93 195 aa26.92■■□□□ 1.9
RER1-201ENST00000306256 IBTKQ9P2D0 1353 aaPredicted RBP26.92■■□□□ 1.9
RER1-201ENST00000306256 SCN4AP35499 1836 aa26.91■■□□□ 1.9
RER1-201ENST00000306256 ALDH1B1P30837 517 aa26.91■■□□□ 1.9
RER1-201ENST00000306256 GIGYF2Q6Y7W6 1299 aaKnown RBP26.91■■□□□ 1.9
RER1-201ENST00000306256 LRP10Q7Z4F1 713 aa26.91■■□□□ 1.9
RER1-201ENST00000306256 ZNF34Q8IZ26 560 aa26.91■■□□□ 1.9
RER1-201ENST00000306256 NECTIN2Q92692 538 aa26.9■■□□□ 1.9
RER1-201ENST00000306256 RIC1Q4ADV7 1423 aa26.9■■□□□ 1.9
RER1-201ENST00000306256 RTKN2Q8IZC4 609 aa26.89■■□□□ 1.9
RER1-201ENST00000306256 BABAM1Q9NWV8 329 aa26.89■■□□□ 1.9
RER1-201ENST00000306256 NTSR2O95665 410 aa26.88■■□□□ 1.89
RER1-201ENST00000306256 WDR43Q15061 677 aaKnown RBP eCLIP26.88■■□□□ 1.89
RER1-201ENST00000306256 RPGRQ92834 1020 aaKnown RBP26.88■■□□□ 1.89
RER1-201ENST00000306256 ZNF541Q9H0D2 1346 aa26.88■■□□□ 1.89
RER1-201ENST00000306256 LAMB2P55268 1798 aa26.87■■□□□ 1.89
RER1-201ENST00000306256 POTEIP0CG38 1075 aa26.87■■□□□ 1.89
RER1-201ENST00000306256 POTEJP0CG39 1038 aa26.87■■□□□ 1.89
RER1-201ENST00000306256 KRT24Q2M2I5 525 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms