RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 BARGINQ6ZT62 677 aa27.58■■■□□ 2.01
SMAD1-201ENST00000302085 TTLL7Q6ZT98 887 aa27.58■■■□□ 2.01
SMAD1-201ENST00000302085 TBC1D32Q96NH3 1257 aa27.58■■■□□ 2.01
SMAD1-201ENST00000302085 CCDC9Q9Y3X0 531 aaKnown RBP27.58■■■□□ 2.01
SMAD1-201ENST00000302085 DNAJC10Q8IXB1 793 aa27.57■■■□□ 2
SMAD1-201ENST00000302085 PRIM1P49642 420 aaKnown RBP27.57■■■□□ 2
SMAD1-201ENST00000302085 UNC5CLQ8IV45 518 aa27.57■■■□□ 2
SMAD1-201ENST00000302085 TEX13AQ9BXU3 409 aaPredicted RBP27.57■■■□□ 2
SMAD1-201ENST00000302085 OSBPL3Q9H4L5 887 aa27.57■■■□□ 2
SMAD1-201ENST00000302085 SALL3Q9BXA9 1300 aa27.56■■■□□ 2
SMAD1-201ENST00000302085 MFAP1P55081 439 aaKnown RBP27.56■■■□□ 2
SMAD1-201ENST00000302085 RBM42Q9BTD8 480 aaKnown RBP27.56■■■□□ 2
SMAD1-201ENST00000302085 ARFGEF2Q9Y6D5 1785 aa27.55■■■□□ 2
SMAD1-201ENST00000302085 PDE1AP54750 535 aa27.55■■■□□ 2
SMAD1-201ENST00000302085 MARCH10Q8NA82 808 aaPredicted RBP27.55■■■□□ 2
SMAD1-201ENST00000302085 SYTL4Q96C24 671 aaPredicted RBP27.55■■■□□ 2
SMAD1-201ENST00000302085 ATP5J2-PTCD1G3V325 749 aa27.54■■■□□ 2
SMAD1-201ENST00000302085 TBC1D9Q6ZT07 1266 aa27.54■■■□□ 2
SMAD1-201ENST00000302085 CERKQ8TCT0 537 aa27.54■■■□□ 2
SMAD1-201ENST00000302085 NGLY1Q96IV0 654 aa27.54■■■□□ 2
SMAD1-201ENST00000302085 BICC1Q9H694 974 aaKnown RBP27.54■■■□□ 2
SMAD1-201ENST00000302085 C8orf37Q96NL8 207 aa27.53■■■□□ 2
SMAD1-201ENST00000302085 SLC4A9Q96Q91 983 aa27.53■■■□□ 2
SMAD1-201ENST00000302085 RHPN1Q8TCX5 695 aa27.53■■■□□ 2
SMAD1-201ENST00000302085 KAT6BQ8WYB5 2073 aa27.53■■■□□ 2
SMAD1-201ENST00000302085 CDC45O75419 566 aa27.51■■■□□ 2
SMAD1-201ENST00000302085 JARID2Q92833 1246 aaPredicted RBP27.51■■■□□ 2
SMAD1-201ENST00000302085 IL1RAPL2Q9NP60 686 aa27.51■■■□□ 2
SMAD1-201ENST00000302085 BCL9LQ86UU0 1499 aa27.51■■□□□ 1.99
SMAD1-201ENST00000302085 SDSP20132 328 aa27.51■■□□□ 1.99
SMAD1-201ENST00000302085 STARD3NLO95772 234 aa27.5■■□□□ 1.99
SMAD1-201ENST00000302085 HSP90AB4PQ58FF6 505 aa27.5■■□□□ 1.99
SMAD1-201ENST00000302085 EPHA10Q5JZY3 1008 aa27.5■■□□□ 1.99
SMAD1-201ENST00000302085 C22orf23Q9BZE7 217 aa27.5■■□□□ 1.99
SMAD1-201ENST00000302085 VPS72Q15906 364 aa27.49■■□□□ 1.99
SMAD1-201ENST00000302085 AEBP2Q6ZN18 517 aaPredicted RBP27.49■■□□□ 1.99
SMAD1-201ENST00000302085 ERICH6Q7L0X2 663 aa27.49■■□□□ 1.99
SMAD1-201ENST00000302085 KIF1BPQ96EK5 621 aa27.49■■□□□ 1.99
SMAD1-201ENST00000302085 STAP2Q9UGK3 403 aa27.49■■□□□ 1.99
SMAD1-201ENST00000302085 DOT1LQ8TEK3 1739 aa27.49■■□□□ 1.99
SMAD1-201ENST00000302085 MX1P20591 662 aa27.49■■□□□ 1.99
SMAD1-201ENST00000302085 ZBTB3Q9H5J0 574 aa27.49■■□□□ 1.99
SMAD1-201ENST00000302085 AFDNP55196 1824 aaKnown RBP27.48■■□□□ 1.99
SMAD1-201ENST00000302085 NUP188Q5SRE5 1749 aa27.48■■□□□ 1.99
SMAD1-201ENST00000302085 PA2G4Q9UQ80 394 aaKnown RBP27.48■■□□□ 1.99
SMAD1-201ENST00000302085 A0A087WZG4 1122 aa27.48■■□□□ 1.99
SMAD1-201ENST00000302085 CASP7P55210 303 aa27.48■■□□□ 1.99
SMAD1-201ENST00000302085 TSHZ3Q63HK5 1081 aa27.48■■□□□ 1.99
SMAD1-201ENST00000302085 FNBP4Q8N3X1 1017 aaPredicted RBP27.48■■□□□ 1.99
SMAD1-201ENST00000302085 CYP19A1P11511 503 aaPredicted RBP27.47■■□□□ 1.99
SMAD1-201ENST00000302085 UBE3BQ7Z3V4 1068 aa27.47■■□□□ 1.99
SMAD1-201ENST00000302085 ACSBG1Q96GR2 724 aa27.46■■□□□ 1.99
SMAD1-201ENST00000302085 SPATA31A6Q5VVP1 1343 aa27.46■■□□□ 1.99
SMAD1-201ENST00000302085 FAM98CQ17RN3 349 aaKnown RBP27.46■■□□□ 1.99
SMAD1-201ENST00000302085 NUTM1Q86Y26 1132 aa27.46■■□□□ 1.99
SMAD1-201ENST00000302085 H7C1W4 665 aa27.45■■□□□ 1.98
SMAD1-201ENST00000302085 SLC4A3P48751 1232 aa27.45■■□□□ 1.98
SMAD1-201ENST00000302085 COL15A1P39059 1388 aa27.45■■□□□ 1.98
SMAD1-201ENST00000302085 OS9Q13438 667 aaPredicted RBP27.44■■□□□ 1.98
SMAD1-201ENST00000302085 CWC25Q9NXE8 425 aaPredicted RBP27.43■■□□□ 1.98
SMAD1-201ENST00000302085 ZNF330Q9Y3S2 320 aaPredicted RBP27.43■■□□□ 1.98
SMAD1-201ENST00000302085 RABL6Q3YEC7 729 aaPredicted RBP27.42■■□□□ 1.98
SMAD1-201ENST00000302085 AOX1Q06278 1338 aa27.41■■□□□ 1.98
SMAD1-201ENST00000302085 CCDC191Q8NCU4 936 aa27.41■■□□□ 1.98
SMAD1-201ENST00000302085 RBM25P49756 843 aaKnown RBP27.4■■□□□ 1.98
SMAD1-201ENST00000302085 TCIRG1Q13488 830 aa27.4■■□□□ 1.98
SMAD1-201ENST00000302085 ERC1Q8IUD2 1116 aa27.4■■□□□ 1.98
SMAD1-201ENST00000302085 ISCA1Q9BUE6 129 aa27.4■■□□□ 1.98
SMAD1-201ENST00000302085 A0A0G2JS52 829 aa27.4■■□□□ 1.98
SMAD1-201ENST00000302085 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.39■■□□□ 1.98
SMAD1-201ENST00000302085 G3BP1Q13283 466 aaKnown RBP eCLIP27.39■■□□□ 1.98
SMAD1-201ENST00000302085 USP21Q9UK80 565 aa27.39■■□□□ 1.98
SMAD1-201ENST00000302085 RFX5P48382 616 aaPredicted RBP27.39■■□□□ 1.97
SMAD1-201ENST00000302085 KIF6Q6ZMV9 814 aa27.39■■□□□ 1.97
SMAD1-201ENST00000302085 TJP1Q07157 1748 aa27.38■■□□□ 1.97
SMAD1-201ENST00000302085 SASH1O94885 1247 aa27.38■■□□□ 1.97
SMAD1-201ENST00000302085 HSPA1LP34931 641 aa27.38■■□□□ 1.97
SMAD1-201ENST00000302085 KLHDC4Q8TBB5 520 aa27.38■■□□□ 1.97
SMAD1-201ENST00000302085 DAXXQ9UER7 740 aaPredicted RBP27.38■■□□□ 1.97
SMAD1-201ENST00000302085 ZBTB1Q9Y2K1 713 aa27.38■■□□□ 1.97
SMAD1-201ENST00000302085 TUBGCP6Q96RT7 1819 aa27.38■■□□□ 1.97
SMAD1-201ENST00000302085 FOXO4P98177 505 aa27.37■■□□□ 1.97
SMAD1-201ENST00000302085 KCNQ2O43526 872 aa27.37■■□□□ 1.97
SMAD1-201ENST00000302085 TRIM28Q13263 835 aaKnown RBP27.37■■□□□ 1.97
SMAD1-201ENST00000302085 CLASRPQ8N2M8 674 aaKnown RBP27.37■■□□□ 1.97
SMAD1-201ENST00000302085 MAP3K15Q6ZN16 1313 aa27.36■■□□□ 1.97
SMAD1-201ENST00000302085 PI4K2BQ8TCG2 481 aa27.36■■□□□ 1.97
SMAD1-201ENST00000302085 COPRSQ9NQ92 184 aa27.36■■□□□ 1.97
SMAD1-201ENST00000302085 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.36■■□□□ 1.97
SMAD1-201ENST00000302085 USP42Q9H9J4 1324 aaKnown RBP27.35■■□□□ 1.97
SMAD1-201ENST00000302085 RTL5Q5HYW3 569 aaPredicted RBP27.35■■□□□ 1.97
SMAD1-201ENST00000302085 CASC1Q6TDU7 716 aa27.35■■□□□ 1.97
SMAD1-201ENST00000302085 ARXQ96QS3 562 aa27.35■■□□□ 1.97
SMAD1-201ENST00000302085 SIL1Q9H173 461 aa27.35■■□□□ 1.97
SMAD1-201ENST00000302085 EIF5BO60841 1220 aaKnown RBP27.34■■□□□ 1.97
SMAD1-201ENST00000302085 PTPN12Q05209 780 aaKnown RBP27.34■■□□□ 1.97
SMAD1-201ENST00000302085 LMBR1LQ6UX01 489 aa27.34■■□□□ 1.97
SMAD1-201ENST00000302085 LOC102724428A0A0B4J2F2 783 aa27.33■■□□□ 1.97
SMAD1-201ENST00000302085 SIK1P57059 783 aa27.33■■□□□ 1.97
SMAD1-201ENST00000302085 HLFQ16534 295 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms