RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 TRIM37O94972 964 aa31.03■■■□□ 2.56
GTF2A1-201ENST00000298173 LINS1Q8NG48 757 aa31.03■■■□□ 2.56
GTF2A1-201ENST00000298173 NUP188Q5SRE5 1749 aa31.03■■■□□ 2.56
GTF2A1-201ENST00000298173 IGHDP01880 384 aa31.03■■■□□ 2.56
GTF2A1-201ENST00000298173 EP400Q96L91 3159 aa31.03■■■□□ 2.56
GTF2A1-201ENST00000298173 LINC00116Q8NCU8 138 aa31.02■■■□□ 2.56
GTF2A1-201ENST00000298173 IGKV5-2P06315 115 aa31.01■■■□□ 2.55
GTF2A1-201ENST00000298173 EIF5P55010 431 aaKnown RBP31.01■■■□□ 2.55
GTF2A1-201ENST00000298173 ILDR1Q86SU0 546 aaPredicted RBP31■■■□□ 2.55
GTF2A1-201ENST00000298173 TAF1LQ8IZX4 1826 aa30.99■■■□□ 2.55
GTF2A1-201ENST00000298173 GNAI3P08754 354 aa30.99■■■□□ 2.55
GTF2A1-201ENST00000298173 KCNQ4P56696 695 aa30.99■■■□□ 2.55
GTF2A1-201ENST00000298173 C1orf115Q9H7X2 142 aa30.99■■■□□ 2.55
GTF2A1-201ENST00000298173 CCNL1Q9UK58 526 aaPredicted RBP30.99■■■□□ 2.55
GTF2A1-201ENST00000298173 NEXNQ0ZGT2 675 aa30.98■■■□□ 2.55
GTF2A1-201ENST00000298173 HDAC1Q13547 482 aaPredicted RBP30.98■■■□□ 2.55
GTF2A1-201ENST00000298173 CWF19L2Q2TBE0 894 aaKnown RBP30.98■■■□□ 2.55
GTF2A1-201ENST00000298173 CNTNAP4Q9C0A0 1308 aa30.98■■■□□ 2.55
GTF2A1-201ENST00000298173 RC3H1Q5TC82 1133 aaKnown RBP30.97■■■□□ 2.55
GTF2A1-201ENST00000298173 CENPQQ7L2Z9 268 aaPredicted RBP30.97■■■□□ 2.55
GTF2A1-201ENST00000298173 MYD88Q99836 296 aa30.97■■■□□ 2.55
GTF2A1-201ENST00000298173 NEURL1BA8MQ27 555 aa30.96■■■□□ 2.55
GTF2A1-201ENST00000298173 RWDD1Q9H446 243 aaPredicted RBP30.96■■■□□ 2.55
GTF2A1-201ENST00000298173 ZNF330Q9Y3S2 320 aaPredicted RBP30.96■■■□□ 2.55
GTF2A1-201ENST00000298173 ZBTB3Q9H5J0 574 aa30.95■■■□□ 2.55
GTF2A1-201ENST00000298173 MAP3K15Q6ZN16 1313 aa30.95■■■□□ 2.54
GTF2A1-201ENST00000298173 SIRT2Q8IXJ6 389 aa30.94■■■□□ 2.54
GTF2A1-201ENST00000298173 UTYO14607 1347 aa30.94■■■□□ 2.54
GTF2A1-201ENST00000298173 GNAI2P04899 355 aa30.93■■■□□ 2.54
GTF2A1-201ENST00000298173 NBPF7P0C2Y1 421 aaPredicted RBP30.93■■■□□ 2.54
GTF2A1-201ENST00000298173 KIF6Q6ZMV9 814 aa30.93■■■□□ 2.54
GTF2A1-201ENST00000298173 RPAP2Q8IXW5 612 aaPredicted RBP30.93■■■□□ 2.54
GTF2A1-201ENST00000298173 LRRC4BQ9NT99 713 aa30.93■■■□□ 2.54
GTF2A1-201ENST00000298173 AFDNP55196 1824 aaKnown RBP30.91■■■□□ 2.54
GTF2A1-201ENST00000298173 ERVV-1B6SEH8 477 aa30.91■■■□□ 2.54
GTF2A1-201ENST00000298173 UBTFL1P0CB47 393 aaPredicted RBP30.91■■■□□ 2.54
GTF2A1-201ENST00000298173 GCKRQ14397 625 aa30.91■■■□□ 2.54
GTF2A1-201ENST00000298173 ANKRD44Q8N8A2 993 aa30.91■■■□□ 2.54
GTF2A1-201ENST00000298173 PLSCR1O15162 318 aa30.9■■■□□ 2.54
GTF2A1-201ENST00000298173 TCIRG1Q13488 830 aa30.9■■■□□ 2.54
GTF2A1-201ENST00000298173 SLC27A3Q5K4L6 730 aa30.9■■■□□ 2.54
GTF2A1-201ENST00000298173 CEP85Q6P2H3 762 aa30.9■■■□□ 2.54
GTF2A1-201ENST00000298173 GIGYF2Q6Y7W6 1299 aaKnown RBP30.9■■■□□ 2.54
GTF2A1-201ENST00000298173 DZIP3Q86Y13 1208 aaKnown RBP30.9■■■□□ 2.54
GTF2A1-201ENST00000298173 ATP5J2-PTCD1G3V325 749 aa30.89■■■□□ 2.54
GTF2A1-201ENST00000298173 GRM8O00222 908 aa30.89■■■□□ 2.54
GTF2A1-201ENST00000298173 TRIM28Q13263 835 aaKnown RBP30.89■■■□□ 2.54
GTF2A1-201ENST00000298173 NPM2Q86SE8 214 aaKnown RBP30.89■■■□□ 2.54
GTF2A1-201ENST00000298173 ISCA1Q9BUE6 129 aa30.89■■■□□ 2.54
GTF2A1-201ENST00000298173 C9orf78Q9NZ63 289 aaPredicted RBP30.89■■■□□ 2.54
GTF2A1-201ENST00000298173 TBC1D2BQ9UPU7 963 aa30.89■■■□□ 2.54
GTF2A1-201ENST00000298173 NUP98P52948 1817 aa30.89■■■□□ 2.53
GTF2A1-201ENST00000298173 HLFQ16534 295 aa30.88■■■□□ 2.53
GTF2A1-201ENST00000298173 PROM2Q8N271 834 aa30.88■■■□□ 2.53
GTF2A1-201ENST00000298173 RPS6KA4O75676 772 aa30.87■■■□□ 2.53
GTF2A1-201ENST00000298173 LRRFIP2Q9Y608 721 aaKnown RBP30.87■■■□□ 2.53
GTF2A1-201ENST00000298173 C4BP0C0L5 1744 aa30.87■■■□□ 2.53
GTF2A1-201ENST00000298173 COL15A1P39059 1388 aa30.86■■■□□ 2.53
GTF2A1-201ENST00000298173 CCDC191Q8NCU4 936 aa30.86■■■□□ 2.53
GTF2A1-201ENST00000298173 ARXQ96QS3 562 aa30.86■■■□□ 2.53
GTF2A1-201ENST00000298173 TNS1Q9HBL0 1735 aaKnown RBP30.85■■■□□ 2.53
GTF2A1-201ENST00000298173 A0A087WZG4 1122 aa30.84■■■□□ 2.53
GTF2A1-201ENST00000298173 CAMTA2O94983 1202 aa30.84■■■□□ 2.53
GTF2A1-201ENST00000298173 APBA3O96018 575 aa30.84■■■□□ 2.53
GTF2A1-201ENST00000298173 ATP8B2P98198 1209 aa30.84■■■□□ 2.53
GTF2A1-201ENST00000298173 TXNRD1Q16881 649 aa30.84■■■□□ 2.53
GTF2A1-201ENST00000298173 HSP90AB3PQ58FF7 597 aa30.84■■■□□ 2.53
GTF2A1-201ENST00000298173 SMC5Q8IY18 1101 aa30.84■■■□□ 2.53
GTF2A1-201ENST00000298173 HDAC5Q9UQL6 1122 aa30.84■■■□□ 2.53
GTF2A1-201ENST00000298173 ANKRD36CQ5JPF3 1778 aa30.83■■■□□ 2.53
GTF2A1-201ENST00000298173 CWC25Q9NXE8 425 aaPredicted RBP30.83■■■□□ 2.53
GTF2A1-201ENST00000298173 KAZALD1Q96I82 304 aa30.82■■■□□ 2.52
GTF2A1-201ENST00000298173 H7C1W4 665 aa30.81■■■□□ 2.52
GTF2A1-201ENST00000298173 CASP7P55210 303 aa30.81■■■□□ 2.52
GTF2A1-201ENST00000298173 GNPATO15228 680 aa30.8■■■□□ 2.52
GTF2A1-201ENST00000298173 HMGB2P26583 209 aaKnown RBP30.8■■■□□ 2.52
GTF2A1-201ENST00000298173 RGL2O15211 777 aa30.79■■■□□ 2.52
GTF2A1-201ENST00000298173 ZNF34Q8IZ26 560 aa30.79■■■□□ 2.52
GTF2A1-201ENST00000298173 SUCLG2Q96I99 432 aa30.79■■■□□ 2.52
GTF2A1-201ENST00000298173 RTCBQ9Y3I0 505 aaKnown RBP30.79■■■□□ 2.52
GTF2A1-201ENST00000298173 BCORQ6W2J9 1755 aa30.79■■■□□ 2.52
GTF2A1-201ENST00000298173 RGPD3A6NKT7 1758 aaPredicted RBP30.78■■■□□ 2.52
GTF2A1-201ENST00000298173 RGPD4Q7Z3J3 1758 aa30.78■■■□□ 2.52
GTF2A1-201ENST00000298173 AMIGO3Q86WK7 504 aa30.78■■■□□ 2.52
GTF2A1-201ENST00000298173 DCTPP1Q9H773 170 aa30.78■■■□□ 2.52
GTF2A1-201ENST00000298173 PNMA6EA0A0J9YXQ4 647 aa30.78■■■□□ 2.52
GTF2A1-201ENST00000298173 MTX1Q13505 466 aa30.78■■■□□ 2.52
GTF2A1-201ENST00000298173 GCC1Q96CN9 775 aa30.77■■■□□ 2.52
GTF2A1-201ENST00000298173 HMMRO75330 724 aa30.76■■■□□ 2.51
GTF2A1-201ENST00000298173 CLEC4GQ6UXB4 293 aa30.76■■■□□ 2.51
GTF2A1-201ENST00000298173 SMIM5Q71RC9 77 aa30.76■■■□□ 2.51
GTF2A1-201ENST00000298173 UBE3BQ7Z3V4 1068 aa30.76■■■□□ 2.51
GTF2A1-201ENST00000298173 NLRP10Q86W26 655 aa30.76■■■□□ 2.51
GTF2A1-201ENST00000298173 SSH3Q8TE77 659 aa30.76■■■□□ 2.51
GTF2A1-201ENST00000298173 UBR3Q6ZT12 1888 aa30.76■■■□□ 2.51
GTF2A1-201ENST00000298173 NARFQ9UHQ1 456 aa30.75■■■□□ 2.51
GTF2A1-201ENST00000298173 POLA2Q14181 598 aa30.74■■■□□ 2.51
GTF2A1-201ENST00000298173 PPP1R42Q7Z4L9 355 aa30.74■■■□□ 2.51
GTF2A1-201ENST00000298173 JARID2Q92833 1246 aaPredicted RBP30.74■■■□□ 2.51
GTF2A1-201ENST00000298173 AK7Q96M32 723 aa30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms