RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 COL23A1Q86Y22 540 aaPredicted RBP35.39■■■■□ 3.26
CHCHD4-201ENST00000295767 FLAD1Q8NFF5 587 aa35.39■■■■□ 3.26
CHCHD4-201ENST00000295767 RFC4P35249 363 aa35.38■■■■□ 3.25
CHCHD4-201ENST00000295767 ZBTB3Q9H5J0 574 aa35.38■■■■□ 3.25
CHCHD4-201ENST00000295767 MAP3K15Q6ZN16 1313 aa35.37■■■■□ 3.25
CHCHD4-201ENST00000295767 ANKRD36CQ5JPF3 1778 aa35.37■■■■□ 3.25
CHCHD4-201ENST00000295767 ANKRD13DQ6ZTN6 518 aa35.37■■■■□ 3.25
CHCHD4-201ENST00000295767 ADCY9O60503 1353 aa35.37■■■■□ 3.25
CHCHD4-201ENST00000295767 DDX58O95786 925 aaKnown RBP35.36■■■■□ 3.25
CHCHD4-201ENST00000295767 SRP68Q9UHB9 627 aaKnown RBP35.36■■■■□ 3.25
CHCHD4-201ENST00000295767 NARFQ9UHQ1 456 aa35.36■■■■□ 3.25
CHCHD4-201ENST00000295767 USP42Q9H9J4 1324 aaKnown RBP35.36■■■■□ 3.25
CHCHD4-201ENST00000295767 CAMTA2O94983 1202 aa35.35■■■■□ 3.25
CHCHD4-201ENST00000295767 PLBD2Q8NHP8 589 aa35.35■■■■□ 3.25
CHCHD4-201ENST00000295767 PI4KAP2A4QPH2 592 aa35.34■■■■□ 3.25
CHCHD4-201ENST00000295767 KSR2Q6VAB6 950 aa35.34■■■■□ 3.25
CHCHD4-201ENST00000295767 PI4KAP1Q8N8J0 262 aa35.34■■■■□ 3.25
CHCHD4-201ENST00000295767 CASZ1Q86V15 1759 aa35.33■■■■□ 3.25
CHCHD4-201ENST00000295767 MSH5O43196 834 aa35.33■■■■□ 3.25
CHCHD4-201ENST00000295767 USPL1Q5W0Q7 1092 aa35.33■■■■□ 3.25
CHCHD4-201ENST00000295767 ZPR1O75312 459 aa35.32■■■■□ 3.25
CHCHD4-201ENST00000295767 RIC3Q7Z5B4 369 aa35.32■■■■□ 3.25
CHCHD4-201ENST00000295767 ARHGAP45Q92619 1136 aa35.32■■■■□ 3.25
CHCHD4-201ENST00000295767 MAP3K2Q9Y2U5 619 aa35.32■■■■□ 3.25
CHCHD4-201ENST00000295767 ERVV-1B6SEH8 477 aa35.32■■■■□ 3.24
CHCHD4-201ENST00000295767 F6X3S4 739 aa35.32■■■■□ 3.24
CHCHD4-201ENST00000295767 IPO8O15397 1037 aaKnown RBP35.32■■■■□ 3.24
CHCHD4-201ENST00000295767 HLFQ16534 295 aa35.32■■■■□ 3.24
CHCHD4-201ENST00000295767 ZKSCAN2Q63HK3 967 aa35.32■■■■□ 3.24
CHCHD4-201ENST00000295767 N4BP2Q86UW6 1770 aaPredicted RBP35.31■■■■□ 3.24
CHCHD4-201ENST00000295767 R3HDM1Q15032 1099 aaKnown RBP35.31■■■■□ 3.24
CHCHD4-201ENST00000295767 PLIN1O60240 522 aa35.3■■■■□ 3.24
CHCHD4-201ENST00000295767 TRIM27P14373 513 aa35.3■■■■□ 3.24
CHCHD4-201ENST00000295767 ATF7IPQ6VMQ6 1270 aa35.3■■■■□ 3.24
CHCHD4-201ENST00000295767 BCL2L12Q9HB09 334 aa35.3■■■■□ 3.24
CHCHD4-201ENST00000295767 TNNQ9UQP3 1299 aa35.3■■■■□ 3.24
CHCHD4-201ENST00000295767 AFDNP55196 1824 aaKnown RBP35.3■■■■□ 3.24
CHCHD4-201ENST00000295767 API5Q9BZZ5 524 aaKnown RBP35.29■■■■□ 3.24
CHCHD4-201ENST00000295767 PDGFDQ9GZP0 370 aaPredicted RBP35.29■■■■□ 3.24
CHCHD4-201ENST00000295767 GIGYF2Q6Y7W6 1299 aaKnown RBP35.28■■■■□ 3.24
CHCHD4-201ENST00000295767 DNAAF4Q8WXU2 420 aa35.28■■■■□ 3.24
CHCHD4-201ENST00000295767 GYS1P13807 737 aa35.26■■■■□ 3.24
CHCHD4-201ENST00000295767 RRP1P56182 461 aaKnown RBP35.26■■■■□ 3.24
CHCHD4-201ENST00000295767 SUPT16HQ9Y5B9 1047 aaKnown RBP35.26■■■■□ 3.24
CHCHD4-201ENST00000295767 PSDA5PKW4 1024 aaPredicted RBP35.25■■■■□ 3.23
CHCHD4-201ENST00000295767 GOLGA6L2Q8N9W4 650 aaPredicted RBP35.25■■■■□ 3.23
CHCHD4-201ENST00000295767 METTL22Q9BUU2 404 aaPredicted RBP35.25■■■■□ 3.23
CHCHD4-201ENST00000295767 ZNF652Q9Y2D9 606 aa35.25■■■■□ 3.23
CHCHD4-201ENST00000295767 PXDNLA1KZ92 1463 aa35.25■■■■□ 3.23
CHCHD4-201ENST00000295767 RGL2O15211 777 aa35.24■■■■□ 3.23
CHCHD4-201ENST00000295767 CLEC4GQ6UXB4 293 aa35.24■■■■□ 3.23
CHCHD4-201ENST00000295767 CLUAP1Q96AJ1 413 aa35.24■■■■□ 3.23
CHCHD4-201ENST00000295767 SLC4A10Q6U841 1118 aa35.23■■■■□ 3.23
CHCHD4-201ENST00000295767 ABCC4O15439 1325 aa35.23■■■■□ 3.23
CHCHD4-201ENST00000295767 RNF123Q5XPI4 1314 aa35.23■■■■□ 3.23
CHCHD4-201ENST00000295767 FKBP8Q14318 412 aa35.22■■■■□ 3.23
CHCHD4-201ENST00000295767 MYD88Q99836 296 aa35.22■■■■□ 3.23
CHCHD4-201ENST00000295767 ATP10DQ9P241 1426 aa35.22■■■■□ 3.23
CHCHD4-201ENST00000295767 TCIRG1Q13488 830 aa35.21■■■■□ 3.23
CHCHD4-201ENST00000295767 COL24A1Q17RW2 1714 aa35.2■■■■□ 3.23
CHCHD4-201ENST00000295767 HSP90AB3PQ58FF7 597 aa35.2■■■■□ 3.23
CHCHD4-201ENST00000295767 TBC1D9BQ66K14 1250 aa35.19■■■■□ 3.22
CHCHD4-201ENST00000295767 ATP5J2-PTCD1G3V325 749 aa35.18■■■■□ 3.22
CHCHD4-201ENST00000295767 NEXNQ0ZGT2 675 aa35.18■■■■□ 3.22
CHCHD4-201ENST00000295767 DZIP1LQ8IYY4 767 aaKnown RBP35.18■■■■□ 3.22
CHCHD4-201ENST00000295767 RLBP1P12271 317 aa35.17■■■■□ 3.22
CHCHD4-201ENST00000295767 GPTP24298 496 aa35.17■■■■□ 3.22
CHCHD4-201ENST00000295767 BEND3Q5T5X7 828 aa35.17■■■■□ 3.22
CHCHD4-201ENST00000295767 FTSJ3Q8IY81 847 aaKnown RBP35.17■■■■□ 3.22
CHCHD4-201ENST00000295767 ZNF34Q8IZ26 560 aa35.17■■■■□ 3.22
CHCHD4-201ENST00000295767 IGKV5-2P06315 115 aa35.17■■■■□ 3.22
CHCHD4-201ENST00000295767 MSL1Q68DK7 614 aa35.17■■■■□ 3.22
CHCHD4-201ENST00000295767 SLC16A10Q8TF71 515 aa35.17■■■■□ 3.22
CHCHD4-201ENST00000295767 ISCA1Q9BUE6 129 aa35.17■■■■□ 3.22
CHCHD4-201ENST00000295767 C20orf194Q5TEA3 1177 aa35.16■■■■□ 3.22
CHCHD4-201ENST00000295767 BICDL1Q6ZP65 573 aa35.16■■■■□ 3.22
CHCHD4-201ENST00000295767 NIP7Q9Y221 180 aaKnown RBP eCLIP35.16■■■■□ 3.22
CHCHD4-201ENST00000295767 UBN2Q6ZU65 1347 aa35.15■■■■□ 3.22
CHCHD4-201ENST00000295767 CWF19L2Q2TBE0 894 aaKnown RBP35.15■■■■□ 3.22
CHCHD4-201ENST00000295767 NLGN1Q8N2Q7 840 aa35.15■■■■□ 3.22
CHCHD4-201ENST00000295767 LINS1Q8NG48 757 aa35.15■■■■□ 3.22
CHCHD4-201ENST00000295767 PANK1Q8TE04 598 aa35.15■■■■□ 3.22
CHCHD4-201ENST00000295767 MS4A1P11836 297 aa35.14■■■■□ 3.22
CHCHD4-201ENST00000295767 NFIXQ14938 502 aa35.14■■■■□ 3.22
CHCHD4-201ENST00000295767 NEURL1BA8MQ27 555 aa35.13■■■■□ 3.21
CHCHD4-201ENST00000295767 TMEM57Q8N5G2 664 aa35.13■■■■□ 3.21
CHCHD4-201ENST00000295767 SRCIN1Q9C0H9 1055 aa35.13■■■■□ 3.21
CHCHD4-201ENST00000295767 CCT4P50991 539 aaKnown RBP35.12■■■■□ 3.21
CHCHD4-201ENST00000295767 PDE3AQ14432 1141 aa35.12■■■■□ 3.21
CHCHD4-201ENST00000295767 INTS3Q68E01 1043 aaKnown RBP35.12■■■■□ 3.21
CHCHD4-201ENST00000295767 TRIM28Q13263 835 aaKnown RBP35.11■■■■□ 3.21
CHCHD4-201ENST00000295767 NLRP10Q86W26 655 aa35.11■■■■□ 3.21
CHCHD4-201ENST00000295767 TM4SF1P30408 202 aa35.1■■■■□ 3.21
CHCHD4-201ENST00000295767 SETDB2Q96T68 719 aa35.1■■■■□ 3.21
CHCHD4-201ENST00000295767 ZBTB7AO95365 584 aa35.1■■■■□ 3.21
CHCHD4-201ENST00000295767 ALDH1L1O75891 902 aa35.09■■■■□ 3.21
CHCHD4-201ENST00000295767 CCDC191Q8NCU4 936 aa35.09■■■■□ 3.21
CHCHD4-201ENST00000295767 CARMIL3Q8ND23 1372 aa35.08■■■■□ 3.21
CHCHD4-201ENST00000295767 PARP10Q53GL7 1025 aa35.08■■■■□ 3.21
CHCHD4-201ENST00000295767 CWC25Q9NXE8 425 aaPredicted RBP35.08■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms