RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 TMC6Q7Z403 805 aa11.96□□□□□ -0.49
CLDN1-201ENST00000295522 DUOX2Q9NRD8 1548 aa11.96□□□□□ -0.49
CLDN1-201ENST00000295522 RTL1A6NKG5 1358 aa11.96□□□□□ -0.49
CLDN1-201ENST00000295522 ZCCHC11Q5TAX3 1644 aaKnown RBP11.96□□□□□ -0.49
CLDN1-201ENST00000295522 SART3Q15020 963 aaKnown RBP11.96□□□□□ -0.49
CLDN1-201ENST00000295522 E2F4Q16254 413 aa11.96□□□□□ -0.49
CLDN1-201ENST00000295522 CYP46A1Q9Y6A2 500 aa11.96□□□□□ -0.49
CLDN1-201ENST00000295522 TTC37Q6PGP7 1564 aa11.96□□□□□ -0.49
CLDN1-201ENST00000295522 DHX16O60231 1041 aaKnown RBP11.96□□□□□ -0.5
CLDN1-201ENST00000295522 PLA2G4AP47712 749 aa11.96□□□□□ -0.5
CLDN1-201ENST00000295522 RNF20Q5VTR2 975 aa11.96□□□□□ -0.5
CLDN1-201ENST00000295522 PLA2G4DQ86XP0 818 aa11.96□□□□□ -0.5
CLDN1-201ENST00000295522 FHOD1Q9Y613 1164 aa11.96□□□□□ -0.5
CLDN1-201ENST00000295522 IQGAP1P46940 1657 aa11.96□□□□□ -0.5
CLDN1-201ENST00000295522 ASXL2Q76L83 1435 aa11.96□□□□□ -0.5
CLDN1-201ENST00000295522 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.95□□□□□ -0.5
CLDN1-201ENST00000295522 CFAP65Q6ZU64 1925 aaKnown RBP11.95□□□□□ -0.5
CLDN1-201ENST00000295522 NUTM2FA1L443 756 aa11.95□□□□□ -0.5
CLDN1-201ENST00000295522 LMOD3Q0VAK6 560 aa11.95□□□□□ -0.5
CLDN1-201ENST00000295522 CARD6Q9BX69 1037 aa11.95□□□□□ -0.5
CLDN1-201ENST00000295522 MED14O60244 1454 aa11.95□□□□□ -0.5
CLDN1-201ENST00000295522 ARHGEF5Q12774 1597 aa11.95□□□□□ -0.5
CLDN1-201ENST00000295522 A0A1W2PP64 1363 aa11.95□□□□□ -0.5
CLDN1-201ENST00000295522 PNMA6EA0A0J9YXQ4 647 aa11.95□□□□□ -0.5
CLDN1-201ENST00000295522 CASQ1P31415 396 aa11.95□□□□□ -0.5
CLDN1-201ENST00000295522 HSPA4P34932 840 aa11.95□□□□□ -0.5
CLDN1-201ENST00000295522 RRS1Q15050 365 aaKnown RBP11.95□□□□□ -0.5
CLDN1-201ENST00000295522 PLPPR3Q6T4P5 718 aa11.95□□□□□ -0.5
CLDN1-201ENST00000295522 C11orf57Q6ZUT1 292 aaPredicted RBP11.95□□□□□ -0.5
CLDN1-201ENST00000295522 AOPEPQ8N6M6 819 aa11.95□□□□□ -0.5
CLDN1-201ENST00000295522 KIF1BPQ96EK5 621 aa11.95□□□□□ -0.5
CLDN1-201ENST00000295522 DDX19AQ9NUU7 478 aaKnown RBP11.95□□□□□ -0.5
CLDN1-201ENST00000295522 CABP1Q9NZU7 370 aa11.95□□□□□ -0.5
CLDN1-201ENST00000295522 SFPQP23246 707 aaKnown RBP eCLIP11.95□□□□□ -0.5
CLDN1-201ENST00000295522 NOM1Q5C9Z4 860 aaKnown RBP11.95□□□□□ -0.5
CLDN1-201ENST00000295522 G2E3Q7L622 706 aa11.95□□□□□ -0.5
CLDN1-201ENST00000295522 RIMBP3CA6NJZ7 1639 aa11.94□□□□□ -0.5
CLDN1-201ENST00000295522 RIMBP3BA6NNM3 1639 aa11.94□□□□□ -0.5
CLDN1-201ENST00000295522 RNF17Q9BXT8 1623 aaKnown RBP11.94□□□□□ -0.5
CLDN1-201ENST00000295522 RIMBP3Q9UFD9 1639 aa11.94□□□□□ -0.5
CLDN1-201ENST00000295522 PTCH1Q13635 1447 aa11.94□□□□□ -0.5
CLDN1-201ENST00000295522 MCM6Q14566 821 aa11.94□□□□□ -0.5
CLDN1-201ENST00000295522 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.94□□□□□ -0.5
CLDN1-201ENST00000295522 PHACTR2O75167 634 aa11.94□□□□□ -0.5
CLDN1-201ENST00000295522 ZKSCAN1P17029 563 aaPredicted RBP11.94□□□□□ -0.5
CLDN1-201ENST00000295522 SMC1AQ14683 1233 aaKnown RBP11.94□□□□□ -0.5
CLDN1-201ENST00000295522 POLKQ9UBT6 870 aa11.94□□□□□ -0.5
CLDN1-201ENST00000295522 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.94□□□□□ -0.5
CLDN1-201ENST00000295522 PLCH2O75038 1416 aa11.94□□□□□ -0.5
CLDN1-201ENST00000295522 BIN1O00499 593 aa11.94□□□□□ -0.5
CLDN1-201ENST00000295522 RAB11FIP3O75154 756 aa11.94□□□□□ -0.5
CLDN1-201ENST00000295522 PTPN21Q16825 1174 aa11.94□□□□□ -0.5
CLDN1-201ENST00000295522 ADCK5Q3MIX3 580 aa11.94□□□□□ -0.5
CLDN1-201ENST00000295522 TTLL5Q6EMB2 1281 aa11.94□□□□□ -0.5
CLDN1-201ENST00000295522 ISM2Q6H9L7 571 aa11.94□□□□□ -0.5
CLDN1-201ENST00000295522 SDF4Q9BRK5 362 aa11.94□□□□□ -0.5
CLDN1-201ENST00000295522 HDAC5Q9UQL6 1122 aa11.94□□□□□ -0.5
CLDN1-201ENST00000295522 RRP15Q9Y3B9 282 aaKnown RBP11.94□□□□□ -0.5
CLDN1-201ENST00000295522 TEX2Q8IWB9 1127 aa11.93□□□□□ -0.5
CLDN1-201ENST00000295522 TDRD7Q8NHU6 1098 aaKnown RBP11.93□□□□□ -0.5
CLDN1-201ENST00000295522 PRAM1Q96QH2 718 aa11.93□□□□□ -0.5
CLDN1-201ENST00000295522 STK31Q9BXU1 1019 aa11.93□□□□□ -0.5
CLDN1-201ENST00000295522 SCAND2PQ9GZW5 306 aaPredicted RBP11.93□□□□□ -0.5
CLDN1-201ENST00000295522 DEF6Q9H4E7 631 aa11.93□□□□□ -0.5
CLDN1-201ENST00000295522 ATP10AO60312 1499 aa11.93□□□□□ -0.5
CLDN1-201ENST00000295522 MAST1Q9Y2H9 1570 aa11.93□□□□□ -0.5
CLDN1-201ENST00000295522 CDC42BPBQ9Y5S2 1711 aa11.93□□□□□ -0.5
CLDN1-201ENST00000295522 NEMFO60524 1076 aa11.93□□□□□ -0.5
CLDN1-201ENST00000295522 KINO60870 393 aaKnown RBP11.93□□□□□ -0.5
CLDN1-201ENST00000295522 EVCP57679 992 aa11.93□□□□□ -0.5
CLDN1-201ENST00000295522 FAM69CQ0P6D2 419 aa11.93□□□□□ -0.5
CLDN1-201ENST00000295522 ME3Q16798 604 aa11.93□□□□□ -0.5
CLDN1-201ENST00000295522 CCDC73Q6ZRK6 1079 aa11.93□□□□□ -0.5
CLDN1-201ENST00000295522 PLEKHA4Q9H4M7 779 aa11.93□□□□□ -0.5
CLDN1-201ENST00000295522 VPS18Q9P253 973 aa11.93□□□□□ -0.5
CLDN1-201ENST00000295522 BRPF1P55201 1214 aaPredicted RBP11.92□□□□□ -0.5
CLDN1-201ENST00000295522 TTC31Q49AM3 519 aaPredicted RBP11.92□□□□□ -0.5
CLDN1-201ENST00000295522 NCBP3Q53F19 620 aaKnown RBP11.92□□□□□ -0.5
CLDN1-201ENST00000295522 CLSTN2Q9H4D0 955 aa11.92□□□□□ -0.5
CLDN1-201ENST00000295522 EFCC1Q9HA90 598 aa11.92□□□□□ -0.5
CLDN1-201ENST00000295522 LARP1Q6PKG0 1096 aaKnown RBP11.92□□□□□ -0.5
CLDN1-201ENST00000295522 LEO1Q8WVC0 666 aaPredicted RBP11.92□□□□□ -0.5
CLDN1-201ENST00000295522 KIF2AO00139 706 aaPredicted RBP11.92□□□□□ -0.5
CLDN1-201ENST00000295522 RAPGEF3O95398 923 aa11.92□□□□□ -0.5
CLDN1-201ENST00000295522 HAP1P54257 671 aaPredicted RBP11.92□□□□□ -0.5
CLDN1-201ENST00000295522 ICE2Q659A1 982 aa11.92□□□□□ -0.5
CLDN1-201ENST00000295522 CNTROBQ8N137 903 aa11.92□□□□□ -0.5
CLDN1-201ENST00000295522 NPHP3Q7Z494 1330 aa11.92□□□□□ -0.5
CLDN1-201ENST00000295522 VGFO15240 615 aaPredicted RBP11.91□□□□□ -0.5
CLDN1-201ENST00000295522 NYAP1Q6ZVC0 841 aa11.91□□□□□ -0.5
CLDN1-201ENST00000295522 PDCP20941 246 aa11.91□□□□□ -0.5
CLDN1-201ENST00000295522 PPP1R13BQ96KQ4 1090 aa11.91□□□□□ -0.5
CLDN1-201ENST00000295522 EP400NLQ6ZTU2 488 aa11.91□□□□□ -0.5
CLDN1-201ENST00000295522 CREBRFQ8IUR6 639 aa11.91□□□□□ -0.5
CLDN1-201ENST00000295522 CEP57L1Q8IYX8 460 aa11.91□□□□□ -0.5
CLDN1-201ENST00000295522 C14orf93Q9H972 538 aaKnown RBP11.91□□□□□ -0.5
CLDN1-201ENST00000295522 ARFGAP3Q9NP61 516 aa11.91□□□□□ -0.5
CLDN1-201ENST00000295522 PTPRCP08575 1304 aa11.91□□□□□ -0.5
CLDN1-201ENST00000295522 ATP10DQ9P241 1426 aa11.9□□□□□ -0.5
CLDN1-201ENST00000295522 MYCNP04198 464 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms