RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 PPP1R42Q7Z4L9 355 aa16.6■□□□□ 0.25
LPCAT1-201ENST00000283415 STRN4Q9NRL3 753 aa16.6■□□□□ 0.25
LPCAT1-201ENST00000283415 FERMT3Q86UX7 667 aa16.6■□□□□ 0.25
LPCAT1-201ENST00000283415 GPATCH3Q96I76 525 aa16.6■□□□□ 0.25
LPCAT1-201ENST00000283415 CHPF2Q9P2E5 772 aa16.6■□□□□ 0.25
LPCAT1-201ENST00000283415 PA2G4Q9UQ80 394 aaKnown RBP16.6■□□□□ 0.25
LPCAT1-201ENST00000283415 PKD1L3Q7Z443 1732 aa16.6■□□□□ 0.25
LPCAT1-201ENST00000283415 NEXNQ0ZGT2 675 aa16.6■□□□□ 0.25
LPCAT1-201ENST00000283415 PNMA6EA0A0J9YXQ4 647 aa16.59■□□□□ 0.25
LPCAT1-201ENST00000283415 PTCD1O75127 700 aaKnown RBP16.59■□□□□ 0.25
LPCAT1-201ENST00000283415 SSH3Q8TE77 659 aa16.59■□□□□ 0.25
LPCAT1-201ENST00000283415 USP44Q9H0E7 712 aa16.59■□□□□ 0.25
LPCAT1-201ENST00000283415 PXDNQ92626 1479 aa16.59■□□□□ 0.25
LPCAT1-201ENST00000283415 PARP4Q9UKK3 1724 aaKnown RBP16.59■□□□□ 0.25
LPCAT1-201ENST00000283415 CPA1P15085 419 aa16.59■□□□□ 0.25
LPCAT1-201ENST00000283415 TAF7LQ5H9L4 462 aa16.59■□□□□ 0.25
LPCAT1-201ENST00000283415 DDX17Q92841 729 aaKnown RBP16.59■□□□□ 0.25
LPCAT1-201ENST00000283415 LGR6Q9HBX8 967 aa16.59■□□□□ 0.25
LPCAT1-201ENST00000283415 CEBPZQ03701 1054 aaKnown RBP16.59■□□□□ 0.25
LPCAT1-201ENST00000283415 HOXB7P09629 217 aa16.58■□□□□ 0.25
LPCAT1-201ENST00000283415 AACSQ86V21 672 aa16.58■□□□□ 0.25
LPCAT1-201ENST00000283415 FSD1Q9BTV5 496 aa16.58■□□□□ 0.25
LPCAT1-201ENST00000283415 CUL4AQ13619 759 aa16.58■□□□□ 0.24
LPCAT1-201ENST00000283415 BOLA2Q9H3K6 86 aa16.58■□□□□ 0.24
LPCAT1-201ENST00000283415 SMC3Q9UQE7 1217 aa16.58■□□□□ 0.24
LPCAT1-201ENST00000283415 KCNQ3O43525 872 aa16.57■□□□□ 0.24
LPCAT1-201ENST00000283415 PKP1Q13835 747 aa16.57■□□□□ 0.24
LPCAT1-201ENST00000283415 KLHL40Q2TBA0 621 aa16.57■□□□□ 0.24
LPCAT1-201ENST00000283415 PLEKHO1Q53GL0 409 aaPredicted RBP16.57■□□□□ 0.24
LPCAT1-201ENST00000283415 SYAP1Q96A49 352 aaPredicted RBP16.57■□□□□ 0.24
LPCAT1-201ENST00000283415 CWF19L2Q2TBE0 894 aaKnown RBP16.56■□□□□ 0.24
LPCAT1-201ENST00000283415 LMBRD1Q9NUN5 540 aa16.56■□□□□ 0.24
LPCAT1-201ENST00000283415 ATP5J2-PTCD1G3V325 749 aa16.56■□□□□ 0.24
LPCAT1-201ENST00000283415 IP6K1Q92551 441 aa16.56■□□□□ 0.24
LPCAT1-201ENST00000283415 CWC22Q9HCG8 908 aaKnown RBP16.56■□□□□ 0.24
LPCAT1-201ENST00000283415 ZNF445P59923 1031 aa16.55■□□□□ 0.24
LPCAT1-201ENST00000283415 ANKLE2Q86XL3 938 aa16.55■□□□□ 0.24
LPCAT1-201ENST00000283415 ESYT1Q9BSJ8 1104 aa16.55■□□□□ 0.24
LPCAT1-201ENST00000283415 ADCY9O60503 1353 aa16.55■□□□□ 0.24
LPCAT1-201ENST00000283415 SPC24Q8NBT2 197 aa16.55■□□□□ 0.24
LPCAT1-201ENST00000283415 LAMB4A4D0S4 1761 aa16.55■□□□□ 0.24
LPCAT1-201ENST00000283415 ANAPC15P60006 121 aa16.54■□□□□ 0.24
LPCAT1-201ENST00000283415 ZKSCAN1P17029 563 aaPredicted RBP16.54■□□□□ 0.24
LPCAT1-201ENST00000283415 ATF3P18847 181 aa16.54■□□□□ 0.24
LPCAT1-201ENST00000283415 CCDC173Q0VFZ6 552 aa16.54■□□□□ 0.24
LPCAT1-201ENST00000283415 PPP1R9BQ96SB3 815 aa16.54■□□□□ 0.24
LPCAT1-201ENST00000283415 ORAI2Q96SN7 254 aa16.54■□□□□ 0.24
LPCAT1-201ENST00000283415 PLEKHG2Q9H7P9 1386 aa16.54■□□□□ 0.24
LPCAT1-201ENST00000283415 EIF4A1P60842 406 aaKnown RBP16.54■□□□□ 0.24
LPCAT1-201ENST00000283415 CNTROBQ8N137 903 aa16.54■□□□□ 0.24
LPCAT1-201ENST00000283415 PI4K2BQ8TCG2 481 aa16.54■□□□□ 0.24
LPCAT1-201ENST00000283415 CHMLP26374 656 aa16.53■□□□□ 0.24
LPCAT1-201ENST00000283415 EVA1CP58658 441 aa16.53■□□□□ 0.24
LPCAT1-201ENST00000283415 STK11IPQ8N1F8 1099 aa16.53■□□□□ 0.24
LPCAT1-201ENST00000283415 KLHDC4Q8TBB5 520 aa16.53■□□□□ 0.24
LPCAT1-201ENST00000283415 STRCP1A6NGW2 1772 aa16.53■□□□□ 0.24
LPCAT1-201ENST00000283415 MTX1Q13505 466 aa16.53■□□□□ 0.24
LPCAT1-201ENST00000283415 PRPF40BQ6NWY9 871 aaKnown RBP16.53■□□□□ 0.24
LPCAT1-201ENST00000283415 JAKMIP1Q96N16 626 aaKnown RBP16.53■□□□□ 0.24
LPCAT1-201ENST00000283415 IL25Q9H293 177 aa16.53■□□□□ 0.24
LPCAT1-201ENST00000283415 CLCN1P35523 988 aa16.53■□□□□ 0.24
LPCAT1-201ENST00000283415 ZNF830Q96NB3 372 aaPredicted RBP16.53■□□□□ 0.24
LPCAT1-201ENST00000283415 TOMM22Q9NS69 142 aa16.53■□□□□ 0.24
LPCAT1-201ENST00000283415 ZRSR1Q15695 479 aaKnown RBP16.53■□□□□ 0.24
LPCAT1-201ENST00000283415 MAP3K2Q9Y2U5 619 aa16.53■□□□□ 0.24
LPCAT1-201ENST00000283415 PAPPAQ13219 1627 aa16.52■□□□□ 0.24
LPCAT1-201ENST00000283415 DDX58O95786 925 aaKnown RBP16.52■□□□□ 0.24
LPCAT1-201ENST00000283415 CASTP20810 708 aaKnown RBP16.52■□□□□ 0.24
LPCAT1-201ENST00000283415 CCDC83Q8IWF9 413 aa16.52■□□□□ 0.24
LPCAT1-201ENST00000283415 UBR2Q8IWV8 1755 aa16.52■□□□□ 0.24
LPCAT1-201ENST00000283415 DNAAF4Q8WXU2 420 aa16.52■□□□□ 0.23
LPCAT1-201ENST00000283415 ERBB4Q15303 1308 aa16.52■□□□□ 0.23
LPCAT1-201ENST00000283415 NDUFB9Q9Y6M9 179 aa16.52■□□□□ 0.23
LPCAT1-201ENST00000283415 BEND3Q5T5X7 828 aa16.51■□□□□ 0.23
LPCAT1-201ENST00000283415 SETD1BQ9UPS6 1966 aaKnown RBP16.51■□□□□ 0.23
LPCAT1-201ENST00000283415 NBPF7P0C2Y1 421 aaPredicted RBP16.51■□□□□ 0.23
LPCAT1-201ENST00000283415 PRIM1P49642 420 aaKnown RBP16.51■□□□□ 0.23
LPCAT1-201ENST00000283415 UTYO14607 1347 aa16.51■□□□□ 0.23
LPCAT1-201ENST00000283415 ZSCAN30Q86W11 494 aa16.51■□□□□ 0.23
LPCAT1-201ENST00000283415 UNC5CLQ8IV45 518 aa16.51■□□□□ 0.23
LPCAT1-201ENST00000283415 NUP188Q5SRE5 1749 aa16.51■□□□□ 0.23
LPCAT1-201ENST00000283415 CHAF1AQ13111 956 aaPredicted RBP16.5■□□□□ 0.23
LPCAT1-201ENST00000283415 NBPF6Q5VWK0 638 aa16.5■□□□□ 0.23
LPCAT1-201ENST00000283415 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.5■□□□□ 0.23
LPCAT1-201ENST00000283415 NBPF4Q96M43 638 aa16.5■□□□□ 0.23
LPCAT1-201ENST00000283415 PALD1Q9ULE6 856 aa16.5■□□□□ 0.23
LPCAT1-201ENST00000283415 ARFGEF2Q9Y6D5 1785 aa16.5■□□□□ 0.23
LPCAT1-201ENST00000283415 H3BQV1 296 aa16.5■□□□□ 0.23
LPCAT1-201ENST00000283415 NPHP1O15259 732 aa16.5■□□□□ 0.23
LPCAT1-201ENST00000283415 IFFO2Q5TF58 517 aa16.5■□□□□ 0.23
LPCAT1-201ENST00000283415 ZNF592Q92610 1267 aa16.5■□□□□ 0.23
LPCAT1-201ENST00000283415 KCNB2Q92953 911 aa16.5■□□□□ 0.23
LPCAT1-201ENST00000283415 TMX3Q96JJ7 454 aa16.5■□□□□ 0.23
LPCAT1-201ENST00000283415 MYD88Q99836 296 aa16.5■□□□□ 0.23
LPCAT1-201ENST00000283415 RUFY2Q8WXA3 655 aa16.49■□□□□ 0.23
LPCAT1-201ENST00000283415 INTS4Q96HW7 963 aaKnown RBP16.49■□□□□ 0.23
LPCAT1-201ENST00000283415 DDX11Q96FC9 970 aa16.49■□□□□ 0.23
LPCAT1-201ENST00000283415 ZSCAN23Q3MJ62 389 aa16.49■□□□□ 0.23
LPCAT1-201ENST00000283415 NECAB1Q8N987 351 aa16.49■□□□□ 0.23
LPCAT1-201ENST00000283415 PRDM10Q9NQV6 1147 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms