RNA–Protein interactions for RNA: ENST00000281187.9

VPS26B-201, Transcript of VPS26, retromer complex component B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26B, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-201ENST00000281187 ZSCAN25Q6NSZ9 544 aa16.75■□□□□ 0.27
VPS26B-201ENST00000281187 RBM8AQ9Y5S9 174 aaKnown RBP16.75■□□□□ 0.27
VPS26B-201ENST00000281187 ZNF853P0CG23 659 aa16.75■□□□□ 0.27
VPS26B-201ENST00000281187 NOL10Q9BSC4 688 aaKnown RBP16.75■□□□□ 0.27
VPS26B-201ENST00000281187 KCNF1Q9H3M0 494 aa16.75■□□□□ 0.27
VPS26B-201ENST00000281187 MTMR6Q9Y217 621 aa16.75■□□□□ 0.27
VPS26B-201ENST00000281187 CDC42BPBQ9Y5S2 1711 aa16.75■□□□□ 0.27
VPS26B-201ENST00000281187 PTCH1Q13635 1447 aa16.74■□□□□ 0.27
VPS26B-201ENST00000281187 URI1O94763 535 aaPredicted RBP16.74■□□□□ 0.27
VPS26B-201ENST00000281187 NCBP1Q09161 790 aaKnown RBP16.74■□□□□ 0.27
VPS26B-201ENST00000281187 CEP57L1Q8IYX8 460 aa16.74■□□□□ 0.27
VPS26B-201ENST00000281187 NAT10Q9H0A0 1025 aaKnown RBP16.74■□□□□ 0.27
VPS26B-201ENST00000281187 PA2G4Q9UQ80 394 aaKnown RBP16.74■□□□□ 0.27
VPS26B-201ENST00000281187 CCDC69A6NI79 296 aa16.74■□□□□ 0.27
VPS26B-201ENST00000281187 ZNF75DP51815 510 aa16.74■□□□□ 0.27
VPS26B-201ENST00000281187 PHAXQ9H814 394 aaKnown RBP16.74■□□□□ 0.27
VPS26B-201ENST00000281187 NLRP6P59044 892 aa16.74■□□□□ 0.27
VPS26B-201ENST00000281187 MTHFSDQ2M296 383 aaKnown RBP16.74■□□□□ 0.27
VPS26B-201ENST00000281187 ADCK5Q3MIX3 580 aa16.74■□□□□ 0.27
VPS26B-201ENST00000281187 STK11IPQ8N1F8 1099 aa16.74■□□□□ 0.27
VPS26B-201ENST00000281187 USHBP1Q8N6Y0 703 aa16.74■□□□□ 0.27
VPS26B-201ENST00000281187 RAD50Q92878 1312 aa16.74■□□□□ 0.27
VPS26B-201ENST00000281187 WASLO00401 505 aaPredicted RBP16.73■□□□□ 0.27
VPS26B-201ENST00000281187 LARP1Q6PKG0 1096 aaKnown RBP16.73■□□□□ 0.27
VPS26B-201ENST00000281187 SNW1Q13573 536 aaKnown RBP16.73■□□□□ 0.27
VPS26B-201ENST00000281187 PI4KAP2A4QPH2 592 aa16.73■□□□□ 0.27
VPS26B-201ENST00000281187 PI4KAP1Q8N8J0 262 aa16.73■□□□□ 0.27
VPS26B-201ENST00000281187 ZNF397Q8NF99 534 aaPredicted RBP16.73■□□□□ 0.27
VPS26B-201ENST00000281187 RGS12O14924 1447 aa16.73■□□□□ 0.27
VPS26B-201ENST00000281187 IQGAP1P46940 1657 aa16.72■□□□□ 0.27
VPS26B-201ENST00000281187 SFPQP23246 707 aaKnown RBP eCLIP16.72■□□□□ 0.27
VPS26B-201ENST00000281187 CCT2P78371 535 aaKnown RBP16.72■□□□□ 0.27
VPS26B-201ENST00000281187 GPS2Q13227 327 aa16.72■□□□□ 0.27
VPS26B-201ENST00000281187 ARID5BQ14865 1188 aa16.72■□□□□ 0.27
VPS26B-201ENST00000281187 ME3Q16798 604 aa16.72■□□□□ 0.27
VPS26B-201ENST00000281187 TMC6Q7Z403 805 aa16.72■□□□□ 0.27
VPS26B-201ENST00000281187 IL25Q9H293 177 aa16.72■□□□□ 0.27
VPS26B-201ENST00000281187 CFAP74Q9C0B2 1584 aa16.72■□□□□ 0.27
VPS26B-201ENST00000281187 TMCO3Q6UWJ1 677 aa16.72■□□□□ 0.27
VPS26B-201ENST00000281187 CACTINQ8WUQ7 758 aaKnown RBP16.72■□□□□ 0.27
VPS26B-201ENST00000281187 CFAP45Q9UL16 551 aa16.72■□□□□ 0.27
VPS26B-201ENST00000281187 PTH1RQ03431 593 aa16.72■□□□□ 0.27
VPS26B-201ENST00000281187 CALCOCO1Q9P1Z2 691 aa16.72■□□□□ 0.27
VPS26B-201ENST00000281187 SOS1Q07889 1333 aaPredicted RBP16.71■□□□□ 0.27
VPS26B-201ENST00000281187 ANKRD1Q15327 319 aa16.71■□□□□ 0.27
VPS26B-201ENST00000281187 AOPEPQ8N6M6 819 aa16.71■□□□□ 0.27
VPS26B-201ENST00000281187 ECHDC1Q9NTX5 307 aa16.71■□□□□ 0.27
VPS26B-201ENST00000281187 NPHP3Q7Z494 1330 aa16.71■□□□□ 0.27
VPS26B-201ENST00000281187 NR1I2O75469 434 aa16.71■□□□□ 0.27
VPS26B-201ENST00000281187 TTLL5Q6EMB2 1281 aa16.71■□□□□ 0.27
VPS26B-201ENST00000281187 SYT10Q6XYQ8 523 aa16.71■□□□□ 0.27
VPS26B-201ENST00000281187 CCAR1Q8IX12 1150 aaKnown RBP16.71■□□□□ 0.27
VPS26B-201ENST00000281187 BRF1Q92994 677 aa16.71■□□□□ 0.27
VPS26B-201ENST00000281187 MRVI1Q9Y6F6 885 aa16.71■□□□□ 0.27
VPS26B-201ENST00000281187 STK38Q15208 465 aa16.71■□□□□ 0.26
VPS26B-201ENST00000281187 SPTLC3Q9NUV7 552 aa16.71■□□□□ 0.26
VPS26B-201ENST00000281187 SLU7O95391 586 aaKnown RBP16.7■□□□□ 0.26
VPS26B-201ENST00000281187 SERPINC1P01008 464 aa16.7■□□□□ 0.26
VPS26B-201ENST00000281187 OSBPL3Q9H4L5 887 aa16.7■□□□□ 0.26
VPS26B-201ENST00000281187 FSIP1Q8NA03 581 aa16.7■□□□□ 0.26
VPS26B-201ENST00000281187 AP5Z1O43299 807 aa16.69■□□□□ 0.26
VPS26B-201ENST00000281187 HSP90AA4PQ58FG1 418 aa16.69■□□□□ 0.26
VPS26B-201ENST00000281187 ZSWIM4Q9H7M6 989 aa16.69■□□□□ 0.26
VPS26B-201ENST00000281187 CEP152O94986 1710 aa16.69■□□□□ 0.26
VPS26B-201ENST00000281187 NEUROD6Q96NK8 337 aa16.69■□□□□ 0.26
VPS26B-201ENST00000281187 DNAI1Q9UI46 699 aa16.69■□□□□ 0.26
VPS26B-201ENST00000281187 ZFYVE9O95405 1425 aa16.69■□□□□ 0.26
VPS26B-201ENST00000281187 YTHDC2Q9H6S0 1430 aaKnown RBP16.69■□□□□ 0.26
VPS26B-201ENST00000281187 GNAT3A8MTJ3 354 aa16.69■□□□□ 0.26
VPS26B-201ENST00000281187 ARHGAP29Q52LW3 1261 aa16.69■□□□□ 0.26
VPS26B-201ENST00000281187 FAM227BQ96M60 508 aa16.69■□□□□ 0.26
VPS26B-201ENST00000281187 ABCA6Q8N139 1617 aa16.69■□□□□ 0.26
VPS26B-201ENST00000281187 MAP3K4Q9Y6R4 1608 aa16.69■□□□□ 0.26
VPS26B-201ENST00000281187 MYOM2P54296 1465 aa16.69■□□□□ 0.26
VPS26B-201ENST00000281187 CPLX1O14810 134 aa16.68■□□□□ 0.26
VPS26B-201ENST00000281187 CREB3L3Q68CJ9 461 aa16.68■□□□□ 0.26
VPS26B-201ENST00000281187 RNF17Q9BXT8 1623 aaKnown RBP16.68■□□□□ 0.26
VPS26B-201ENST00000281187 CCDC171Q6TFL3 1326 aa16.68■□□□□ 0.26
VPS26B-201ENST00000281187 NBPF7P0C2Y1 421 aaPredicted RBP16.68■□□□□ 0.26
VPS26B-201ENST00000281187 BMS1Q14692 1282 aaKnown RBP16.68■□□□□ 0.26
VPS26B-201ENST00000281187 SYNE3Q6ZMZ3 975 aa16.68■□□□□ 0.26
VPS26B-201ENST00000281187 ANO10Q9NW15 660 aa16.68■□□□□ 0.26
VPS26B-201ENST00000281187 NPATQ14207 1427 aa16.68■□□□□ 0.26
VPS26B-201ENST00000281187 JAK2O60674 1132 aa16.68■□□□□ 0.26
VPS26B-201ENST00000281187 GABPB1Q06547 395 aaPredicted RBP16.68■□□□□ 0.26
VPS26B-201ENST00000281187 STX1AQ16623 288 aa16.68■□□□□ 0.26
VPS26B-201ENST00000281187 ERCC6LQ2NKX8 1250 aa16.68■□□□□ 0.26
VPS26B-201ENST00000281187 VPS53Q5VIR6 699 aa16.68■□□□□ 0.26
VPS26B-201ENST00000281187 LEO1Q8WVC0 666 aaPredicted RBP16.67■□□□□ 0.26
VPS26B-201ENST00000281187 NMIQ13287 307 aaPredicted RBP16.67■□□□□ 0.26
VPS26B-201ENST00000281187 HYPKQ9NX55 129 aa16.67■□□□□ 0.26
VPS26B-201ENST00000281187 TPCN1Q9ULQ1 816 aa16.67■□□□□ 0.26
VPS26B-201ENST00000281187 ABCC1P33527 1531 aa16.67■□□□□ 0.26
VPS26B-201ENST00000281187 CFAP100Q494V2 611 aa16.67■□□□□ 0.26
VPS26B-201ENST00000281187 FAM135BQ49AJ0 1406 aa16.67■□□□□ 0.26
VPS26B-201ENST00000281187 ATP7AQ04656 1500 aa16.66■□□□□ 0.26
VPS26B-201ENST00000281187 RAB11FIP4Q86YS3 637 aa16.66■□□□□ 0.26
VPS26B-201ENST00000281187 DNAAF4Q8WXU2 420 aa16.66■□□□□ 0.26
VPS26B-201ENST00000281187 TRIM34Q9BYJ4 488 aa16.66■□□□□ 0.26
VPS26B-201ENST00000281187 USP44Q9H0E7 712 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms