RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 CDC37L1Q7L3B6 337 aa22.28■■□□□ 1.16
SSC4D-201ENST00000275560 CCDC186Q7Z3E2 898 aa22.28■■□□□ 1.16
SSC4D-201ENST00000275560 ANXA1P04083 346 aa22.27■■□□□ 1.16
SSC4D-201ENST00000275560 MRVI1Q9Y6F6 885 aa22.27■■□□□ 1.16
SSC4D-201ENST00000275560 DIAPH3Q9NSV4 1193 aa22.27■■□□□ 1.16
SSC4D-201ENST00000275560 TFIP11Q9UBB9 837 aaKnown RBP22.27■■□□□ 1.16
SSC4D-201ENST00000275560 IL17REQ8NFR9 667 aa22.26■■□□□ 1.15
SSC4D-201ENST00000275560 ARHGEF10O15013 1369 aa22.26■■□□□ 1.15
SSC4D-201ENST00000275560 ROBO2Q9HCK4 1378 aa22.26■■□□□ 1.15
SSC4D-201ENST00000275560 TYRO3Q06418 890 aa22.26■■□□□ 1.15
SSC4D-201ENST00000275560 HDGFL1Q5TGJ6 251 aa22.26■■□□□ 1.15
SSC4D-201ENST00000275560 DRC7Q8IY82 874 aa22.26■■□□□ 1.15
SSC4D-201ENST00000275560 FAM208AQ9UK61 1670 aaKnown RBP22.26■■□□□ 1.15
SSC4D-201ENST00000275560 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.26■■□□□ 1.15
SSC4D-201ENST00000275560 A0A0U1RQG5 324 aaPredicted RBP22.26■■□□□ 1.15
SSC4D-201ENST00000275560 AMPHP49418 695 aa22.26■■□□□ 1.15
SSC4D-201ENST00000275560 ANKRD7Q92527 254 aa22.26■■□□□ 1.15
SSC4D-201ENST00000275560 LTV1Q96GA3 475 aaPredicted RBP22.26■■□□□ 1.15
SSC4D-201ENST00000275560 OS9Q13438 667 aaPredicted RBP22.25■■□□□ 1.15
SSC4D-201ENST00000275560 KIF1BPQ96EK5 621 aa22.25■■□□□ 1.15
SSC4D-201ENST00000275560 TPCN1Q9ULQ1 816 aa22.25■■□□□ 1.15
SSC4D-201ENST00000275560 POLA2Q14181 598 aa22.25■■□□□ 1.15
SSC4D-201ENST00000275560 ANO6Q4KMQ2 910 aa22.25■■□□□ 1.15
SSC4D-201ENST00000275560 NUTM2GQ5VZR2 741 aa22.24■■□□□ 1.15
SSC4D-201ENST00000275560 LARP1BQ659C4 914 aaKnown RBP22.24■■□□□ 1.15
SSC4D-201ENST00000275560 FAM200AQ8TCP9 573 aa22.24■■□□□ 1.15
SSC4D-201ENST00000275560 RAB11FIP3O75154 756 aa22.24■■□□□ 1.15
SSC4D-201ENST00000275560 MAP3K11Q16584 847 aa22.24■■□□□ 1.15
SSC4D-201ENST00000275560 NUP62CLQ9H1M0 184 aa22.24■■□□□ 1.15
SSC4D-201ENST00000275560 DACT1Q9NYF0 836 aa22.24■■□□□ 1.15
SSC4D-201ENST00000275560 NCBP1Q09161 790 aaKnown RBP22.23■■□□□ 1.15
SSC4D-201ENST00000275560 CBX8Q9HC52 389 aa22.23■■□□□ 1.15
SSC4D-201ENST00000275560 CYP46A1Q9Y6A2 500 aa22.23■■□□□ 1.15
SSC4D-201ENST00000275560 GNAT3A8MTJ3 354 aa22.23■■□□□ 1.15
SSC4D-201ENST00000275560 GOLGA6L6A8MZA4 724 aa22.23■■□□□ 1.15
SSC4D-201ENST00000275560 TAF6LQ9Y6J9 622 aa22.22■■□□□ 1.15
SSC4D-201ENST00000275560 CTIFO43310 598 aaKnown RBP22.22■■□□□ 1.15
SSC4D-201ENST00000275560 TAF7Q15545 349 aaPredicted RBP22.22■■□□□ 1.15
SSC4D-201ENST00000275560 VPS53Q5VIR6 699 aa22.22■■□□□ 1.15
SSC4D-201ENST00000275560 USHBP1Q8N6Y0 703 aa22.22■■□□□ 1.15
SSC4D-201ENST00000275560 PA2G4Q9UQ80 394 aaKnown RBP22.22■■□□□ 1.15
SSC4D-201ENST00000275560 USP6P35125 1406 aa22.22■■□□□ 1.15
SSC4D-201ENST00000275560 EPB41L2O43491 1005 aaKnown RBP22.21■■□□□ 1.15
SSC4D-201ENST00000275560 FAM227BQ96M60 508 aa22.21■■□□□ 1.15
SSC4D-201ENST00000275560 ZSWIM6Q9HCJ5 1215 aa22.21■■□□□ 1.15
SSC4D-201ENST00000275560 STK3Q13188 491 aa22.21■■□□□ 1.15
SSC4D-201ENST00000275560 TRIM5Q9C035 493 aa22.21■■□□□ 1.15
SSC4D-201ENST00000275560 TNMDQ9H2S6 317 aa22.2■■□□□ 1.14
SSC4D-201ENST00000275560 PODXL2Q9NZ53 605 aa22.2■■□□□ 1.14
SSC4D-201ENST00000275560 PI4KAP2A4QPH2 592 aa22.2■■□□□ 1.14
SSC4D-201ENST00000275560 KCNJ4P48050 445 aa22.2■■□□□ 1.14
SSC4D-201ENST00000275560 KRT85P78386 507 aa22.2■■□□□ 1.14
SSC4D-201ENST00000275560 PI4KAP1Q8N8J0 262 aa22.2■■□□□ 1.14
SSC4D-201ENST00000275560 GTPBP4Q9BZE4 634 aaKnown RBP22.2■■□□□ 1.14
SSC4D-201ENST00000275560 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.19■■□□□ 1.14
SSC4D-201ENST00000275560 IGSF1Q8N6C5 1336 aa22.19■■□□□ 1.14
SSC4D-201ENST00000275560 RBM8AQ9Y5S9 174 aaKnown RBP22.19■■□□□ 1.14
SSC4D-201ENST00000275560 KDRP35968 1356 aa22.18■■□□□ 1.14
SSC4D-201ENST00000275560 CHPF2Q9P2E5 772 aa22.18■■□□□ 1.14
SSC4D-201ENST00000275560 TPM3P06753 285 aa22.18■■□□□ 1.14
SSC4D-201ENST00000275560 ZNF592Q92610 1267 aa22.18■■□□□ 1.14
SSC4D-201ENST00000275560 DNAJC25Q9H1X3 360 aa22.18■■□□□ 1.14
SSC4D-201ENST00000275560 FLT4P35916 1363 aa22.18■■□□□ 1.14
SSC4D-201ENST00000275560 USP31Q70CQ4 1352 aa22.18■■□□□ 1.14
SSC4D-201ENST00000275560 TNNT1P13805 278 aa22.17■■□□□ 1.14
SSC4D-201ENST00000275560 CCDC144BQ3MJ40 725 aa22.17■■□□□ 1.14
SSC4D-201ENST00000275560 ZSCAN25Q6NSZ9 544 aa22.17■■□□□ 1.14
SSC4D-201ENST00000275560 SPATA31D1Q6ZQQ2 1576 aa22.17■■□□□ 1.14
SSC4D-201ENST00000275560 CCDC144CPQ8IYA2 1237 aa22.17■■□□□ 1.14
SSC4D-201ENST00000275560 NR1I2O75469 434 aa22.17■■□□□ 1.14
SSC4D-201ENST00000275560 GLRX3O76003 335 aaKnown RBP22.17■■□□□ 1.14
SSC4D-201ENST00000275560 ARID5BQ14865 1188 aa22.17■■□□□ 1.14
SSC4D-201ENST00000275560 CREB3L3Q68CJ9 461 aa22.17■■□□□ 1.14
SSC4D-201ENST00000275560 LARP1Q6PKG0 1096 aaKnown RBP22.17■■□□□ 1.14
SSC4D-201ENST00000275560 SH2B1Q9NRF2 756 aaPredicted RBP22.17■■□□□ 1.14
SSC4D-201ENST00000275560 NECTIN1Q15223 517 aa22.16■■□□□ 1.14
SSC4D-201ENST00000275560 ZSCAN31Q96LW9 406 aaPredicted RBP22.16■■□□□ 1.14
SSC4D-201ENST00000275560 A0A087WWV3 80 aa22.16■■□□□ 1.14
SSC4D-201ENST00000275560 GOLGA6L4A6NEF3 574 aa22.16■■□□□ 1.14
SSC4D-201ENST00000275560 KCNQ3O43525 872 aa22.16■■□□□ 1.14
SSC4D-201ENST00000275560 CACTINQ8WUQ7 758 aaKnown RBP22.16■■□□□ 1.14
SSC4D-201ENST00000275560 ZNF75DP51815 510 aa22.16■■□□□ 1.14
SSC4D-201ENST00000275560 SPATA32Q96LK8 384 aa22.16■■□□□ 1.14
SSC4D-201ENST00000275560 PLEKHG3A1L390 1219 aa22.15■■□□□ 1.14
SSC4D-201ENST00000275560 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.15■■□□□ 1.14
SSC4D-201ENST00000275560 V9GYY5 206 aaPredicted RBP22.15■■□□□ 1.14
SSC4D-201ENST00000275560 CCDC171Q6TFL3 1326 aa22.15■■□□□ 1.14
SSC4D-201ENST00000275560 SBNO1A3KN83 1393 aa22.15■■□□□ 1.14
SSC4D-201ENST00000275560 FMN2Q9NZ56 1722 aa22.15■■□□□ 1.14
SSC4D-201ENST00000275560 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.15■■□□□ 1.14
SSC4D-201ENST00000275560 BEND3Q5T5X7 828 aa22.15■■□□□ 1.14
SSC4D-201ENST00000275560 DDX11Q96FC9 970 aa22.15■■□□□ 1.14
SSC4D-201ENST00000275560 MAP3K5Q99683 1374 aa22.14■■□□□ 1.14
SSC4D-201ENST00000275560 RUFY2Q8WXA3 655 aa22.14■■□□□ 1.14
SSC4D-201ENST00000275560 NMIQ13287 307 aaPredicted RBP22.14■■□□□ 1.13
SSC4D-201ENST00000275560 CLASRPQ8N2M8 674 aaKnown RBP22.14■■□□□ 1.13
SSC4D-201ENST00000275560 NALCNQ8IZF0 1738 aa22.14■■□□□ 1.13
SSC4D-201ENST00000275560 ZKSCAN1P17029 563 aaPredicted RBP22.13■■□□□ 1.13
SSC4D-201ENST00000275560 USP27XA6NNY8 438 aa22.13■■□□□ 1.13
SSC4D-201ENST00000275560 TPD52L1Q16890 204 aaPredicted RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms