RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 CCDC194A0A1B0GVG4 234 aa15.22■□□□□ 0.03
PRDM16-201ENST00000270722 VIMP08670 466 aaKnown RBP15.22■□□□□ 0.03
PRDM16-201ENST00000270722 GSTO1P78417 241 aa15.22■□□□□ 0.03
PRDM16-201ENST00000270722 CEP128Q6ZU80 1094 aa15.22■□□□□ 0.03
PRDM16-201ENST00000270722 TRAK2O60296 914 aa15.21■□□□□ 0.03
PRDM16-201ENST00000270722 PDE4BQ07343 736 aa15.21■□□□□ 0.03
PRDM16-201ENST00000270722 ALS2CR12Q96Q35 445 aa15.21■□□□□ 0.03
PRDM16-201ENST00000270722 STMN1P16949 149 aa15.21■□□□□ 0.03
PRDM16-201ENST00000270722 CCDC96Q2M329 555 aa15.21■□□□□ 0.03
PRDM16-201ENST00000270722 MSL1Q68DK7 614 aa15.21■□□□□ 0.03
PRDM16-201ENST00000270722 CEP104O60308 925 aa15.21■□□□□ 0.03
PRDM16-201ENST00000270722 ZWINTO95229 277 aa15.21■□□□□ 0.03
PRDM16-201ENST00000270722 CALML4Q96GE6 196 aa15.21■□□□□ 0.03
PRDM16-201ENST00000270722 PRPHP41219 470 aa15.21■□□□□ 0.03
PRDM16-201ENST00000270722 GRPEL1Q9HAV7 217 aa15.21■□□□□ 0.03
PRDM16-201ENST00000270722 FEZ2Q9UHY8 353 aaPredicted RBP15.21■□□□□ 0.03
PRDM16-201ENST00000270722 ZBTB12Q9Y330 459 aaPredicted RBP15.21■□□□□ 0.03
PRDM16-201ENST00000270722 PLEKHH1Q9ULM0 1364 aa15.21■□□□□ 0.03
PRDM16-201ENST00000270722 IFIT5Q13325 482 aaKnown RBP15.21■□□□□ 0.03
PRDM16-201ENST00000270722 CATIPQ7Z7H3 387 aa15.21■□□□□ 0.03
PRDM16-201ENST00000270722 CEP120Q8N960 986 aa15.21■□□□□ 0.03
PRDM16-201ENST00000270722 CTAGE5O15320 804 aa15.21■□□□□ 0.02
PRDM16-201ENST00000270722 CAVIN2O95810 425 aa15.2■□□□□ 0.02
PRDM16-201ENST00000270722 ZNF365Q70YC5 407 aa15.2■□□□□ 0.02
PRDM16-201ENST00000270722 MSANTD4Q8NCY6 345 aa15.2■□□□□ 0.02
PRDM16-201ENST00000270722 SCAND2PQ9GZW5 306 aaPredicted RBP15.2■□□□□ 0.02
PRDM16-201ENST00000270722 CIZ1Q9ULV3 898 aaPredicted RBP15.2■□□□□ 0.02
PRDM16-201ENST00000270722 LUC7L2Q9Y383 392 aaKnown RBP15.2■□□□□ 0.02
PRDM16-201ENST00000270722 KIF5CO60282 957 aa15.2■□□□□ 0.02
PRDM16-201ENST00000270722 IFFO1Q0D2I5 559 aa15.2■□□□□ 0.02
PRDM16-201ENST00000270722 WDR63Q8IWG1 891 aa15.2■□□□□ 0.02
PRDM16-201ENST00000270722 EHBP1Q8NDI1 1231 aa15.2■□□□□ 0.02
PRDM16-201ENST00000270722 SRGAP3O43295 1099 aa15.2■□□□□ 0.02
PRDM16-201ENST00000270722 GLRX3O76003 335 aaKnown RBP15.2■□□□□ 0.02
PRDM16-201ENST00000270722 CDK19Q9BWU1 502 aa15.2■□□□□ 0.02
PRDM16-201ENST00000270722 CABP2Q9NPB3 220 aa15.2■□□□□ 0.02
PRDM16-201ENST00000270722 STX6O43752 255 aa15.2■□□□□ 0.02
PRDM16-201ENST00000270722 PIP4K2BP78356 416 aa15.2■□□□□ 0.02
PRDM16-201ENST00000270722 OGFOD1Q8N543 542 aa15.2■□□□□ 0.02
PRDM16-201ENST00000270722 CCDC94Q9BW85 323 aaPredicted RBP15.2■□□□□ 0.02
PRDM16-201ENST00000270722 RNF187Q5TA31 235 aaPredicted RBP15.19■□□□□ 0.02
PRDM16-201ENST00000270722 NUTM1Q86Y26 1132 aa15.19■□□□□ 0.02
PRDM16-201ENST00000270722 HDAC9Q9UKV0 1011 aa15.19■□□□□ 0.02
PRDM16-201ENST00000270722 WHAMMP3Q1A5X7 153 aa15.19■□□□□ 0.02
PRDM16-201ENST00000270722 NOC2LQ9Y3T9 749 aaKnown RBP15.19■□□□□ 0.02
PRDM16-201ENST00000270722 KANK3Q6NY19 840 aa15.19■□□□□ 0.02
PRDM16-201ENST00000270722 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.19■□□□□ 0.02
PRDM16-201ENST00000270722 SFPQP23246 707 aaKnown RBP eCLIP15.19■□□□□ 0.02
PRDM16-201ENST00000270722 TCP11L2Q8N4U5 519 aa15.19■□□□□ 0.02
PRDM16-201ENST00000270722 MYCNP04198 464 aaPredicted RBP15.19■□□□□ 0.02
PRDM16-201ENST00000270722 GTF2F1P35269 517 aaKnown RBP eCLIP15.19■□□□□ 0.02
PRDM16-201ENST00000270722 KIF18AQ8NI77 898 aa15.19■□□□□ 0.02
PRDM16-201ENST00000270722 EXOC6Q8TAG9 804 aa15.19■□□□□ 0.02
PRDM16-201ENST00000270722 HAUS2Q9NVX0 235 aa15.19■□□□□ 0.02
PRDM16-201ENST00000270722 POLA1P09884 1462 aaPredicted RBP15.18■□□□□ 0.02
PRDM16-201ENST00000270722 BMP15O95972 392 aa15.18■□□□□ 0.02
PRDM16-201ENST00000270722 NUP62CLQ9H1M0 184 aa15.18■□□□□ 0.02
PRDM16-201ENST00000270722 SH2B1Q9NRF2 756 aaPredicted RBP15.18■□□□□ 0.02
PRDM16-201ENST00000270722 ZNF853P0CG23 659 aa15.18■□□□□ 0.02
PRDM16-201ENST00000270722 NAA25Q14CX7 972 aa15.18■□□□□ 0.02
PRDM16-201ENST00000270722 RPAP2Q8IXW5 612 aaPredicted RBP15.18■□□□□ 0.02
PRDM16-201ENST00000270722 MAP2K2P36507 400 aa15.18■□□□□ 0.02
PRDM16-201ENST00000270722 CNPY4Q8N129 248 aa15.18■□□□□ 0.02
PRDM16-201ENST00000270722 KIF1BPQ96EK5 621 aa15.18■□□□□ 0.02
PRDM16-201ENST00000270722 SULT6B1Q6IMI4 303 aa15.18■□□□□ 0.02
PRDM16-201ENST00000270722 IMPG2Q9BZV3 1241 aa15.18■□□□□ 0.02
PRDM16-201ENST00000270722 ST5P78524 1137 aa15.18■□□□□ 0.02
PRDM16-201ENST00000270722 MYL6BP14649 208 aa15.17■□□□□ 0.02
PRDM16-201ENST00000270722 TUBB4BP68371 445 aa15.17■□□□□ 0.02
PRDM16-201ENST00000270722 SPATS2LQ9NUQ6 558 aaKnown RBP15.17■□□□□ 0.02
PRDM16-201ENST00000270722 CCDC160A6NGH7 325 aa15.17■□□□□ 0.02
PRDM16-201ENST00000270722 CNGA1P29973 690 aa15.17■□□□□ 0.02
PRDM16-201ENST00000270722 IBSPP21815 317 aaPredicted RBP15.17■□□□□ 0.02
PRDM16-201ENST00000270722 CFAP100Q494V2 611 aa15.17■□□□□ 0.02
PRDM16-201ENST00000270722 GNAT3A8MTJ3 354 aa15.17■□□□□ 0.02
PRDM16-201ENST00000270722 CEBPZQ03701 1054 aaKnown RBP15.17■□□□□ 0.02
PRDM16-201ENST00000270722 PDRG1Q9NUG6 133 aa15.17■□□□□ 0.02
PRDM16-201ENST00000270722 CHMP4BP1P59074 171 aa15.17■□□□□ 0.02
PRDM16-201ENST00000270722 CCDC65Q8IXS2 484 aa15.17■□□□□ 0.02
PRDM16-201ENST00000270722 GABPB2Q8TAK5 448 aaPredicted RBP15.17■□□□□ 0.02
PRDM16-201ENST00000270722 EPRSP07814 1512 aaKnown RBP15.16■□□□□ 0.02
PRDM16-201ENST00000270722 PRAM1Q96QH2 718 aa15.16■□□□□ 0.02
PRDM16-201ENST00000270722 NGLY1Q96IV0 654 aa15.16■□□□□ 0.02
PRDM16-201ENST00000270722 RPAINQ86UA6 219 aa15.16■□□□□ 0.02
PRDM16-201ENST00000270722 CTNNBL1Q8WYA6 563 aaPredicted RBP15.16■□□□□ 0.02
PRDM16-201ENST00000270722 CEP135Q66GS9 1140 aa15.16■□□□□ 0.02
PRDM16-201ENST00000270722 PRPF31Q8WWY3 499 aaKnown RBP15.16■□□□□ 0.02
PRDM16-201ENST00000270722 CLIP2Q9UDT6 1046 aa15.16■□□□□ 0.02
PRDM16-201ENST00000270722 MACROD2A1Z1Q3 448 aa15.16■□□□□ 0.02
PRDM16-201ENST00000270722 FCHSD2O94868 740 aa15.16■□□□□ 0.02
PRDM16-201ENST00000270722 USP6NLQ92738 828 aa15.16■□□□□ 0.02
PRDM16-201ENST00000270722 PRC1O43663 620 aa15.15■□□□□ 0.02
PRDM16-201ENST00000270722 YEATS4O95619 227 aa15.15■□□□□ 0.02
PRDM16-201ENST00000270722 SYNCQ9H7C4 482 aa15.15■□□□□ 0.02
PRDM16-201ENST00000270722 ZBTB24O43167 697 aaPredicted RBP15.15■□□□□ 0.02
PRDM16-201ENST00000270722 ATP2A1O14983 1001 aa15.15■□□□□ 0.02
PRDM16-201ENST00000270722 BRDTQ58F21 947 aaPredicted RBP15.15■□□□□ 0.02
PRDM16-201ENST00000270722 PPP1R42Q7Z4L9 355 aa15.15■□□□□ 0.02
PRDM16-201ENST00000270722 SIL1Q9H173 461 aa15.15■□□□□ 0.02
PRDM16-201ENST00000270722 SYCP3Q8IZU3 236 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 1605.9 ms