RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 DDX17Q92841 729 aaKnown RBP10.44□□□□□ -0.74
VAPB-201ENST00000265619 TRMT1Q9NXH9 659 aaKnown RBP10.44□□□□□ -0.74
VAPB-201ENST00000265619 AMPHP49418 695 aa10.44□□□□□ -0.74
VAPB-201ENST00000265619 CAMK4Q16566 473 aa10.44□□□□□ -0.74
VAPB-201ENST00000265619 INTS3Q68E01 1043 aaKnown RBP10.44□□□□□ -0.74
VAPB-201ENST00000265619 ABTB2Q8N961 1025 aa10.44□□□□□ -0.74
VAPB-201ENST00000265619 MED14O60244 1454 aa10.44□□□□□ -0.74
VAPB-201ENST00000265619 ABCC11Q96J66 1382 aa10.44□□□□□ -0.74
VAPB-201ENST00000265619 NEURL4Q96JN8 1562 aa10.44□□□□□ -0.74
VAPB-201ENST00000265619 CLCN6P51797 869 aa10.44□□□□□ -0.74
VAPB-201ENST00000265619 BMS1Q14692 1282 aaKnown RBP10.44□□□□□ -0.74
VAPB-201ENST00000265619 REC8O95072 547 aa10.43□□□□□ -0.74
VAPB-201ENST00000265619 PSME1Q06323 249 aa10.43□□□□□ -0.74
VAPB-201ENST00000265619 TSPYL6Q8N831 410 aa10.43□□□□□ -0.74
VAPB-201ENST00000265619 TSPYL1Q9H0U9 437 aa10.43□□□□□ -0.74
VAPB-201ENST00000265619 PNMA6AP0CW24 399 aaPredicted RBP10.43□□□□□ -0.74
VAPB-201ENST00000265619 TMPOP42166 694 aaKnown RBP10.43□□□□□ -0.74
VAPB-201ENST00000265619 DCTN1Q14203 1278 aa10.43□□□□□ -0.74
VAPB-201ENST00000265619 DRC7Q8IY82 874 aa10.43□□□□□ -0.74
VAPB-201ENST00000265619 GPATCH11Q8N954 259 aa10.43□□□□□ -0.74
VAPB-201ENST00000265619 SEC31AO94979 1220 aaKnown RBP10.42□□□□□ -0.74
VAPB-201ENST00000265619 PAXBP1Q9Y5B6 917 aa10.42□□□□□ -0.74
VAPB-201ENST00000265619 DRC1Q96MC2 740 aa10.42□□□□□ -0.74
VAPB-201ENST00000265619 MRVI1Q9Y6F6 885 aa10.42□□□□□ -0.74
VAPB-201ENST00000265619 ADGRB2O60241 1585 aa10.42□□□□□ -0.74
VAPB-201ENST00000265619 ADAMTS13Q76LX8 1427 aa10.42□□□□□ -0.74
VAPB-201ENST00000265619 SETD1BQ9UPS6 1966 aaKnown RBP10.42□□□□□ -0.74
VAPB-201ENST00000265619 HSP90AB2PQ58FF8 381 aa10.42□□□□□ -0.74
VAPB-201ENST00000265619 ICE2Q659A1 982 aa10.42□□□□□ -0.74
VAPB-201ENST00000265619 CCDC191Q8NCU4 936 aa10.42□□□□□ -0.74
VAPB-201ENST00000265619 PLEKHF1Q96S99 279 aa10.42□□□□□ -0.74
VAPB-201ENST00000265619 EPC1Q9H2F5 836 aa10.42□□□□□ -0.74
VAPB-201ENST00000265619 LRRFIP2Q9Y608 721 aaKnown RBP10.42□□□□□ -0.74
VAPB-201ENST00000265619 C3P01024 1663 aa10.42□□□□□ -0.74
VAPB-201ENST00000265619 H2AFXP16104 143 aaPredicted RBP10.41□□□□□ -0.74
VAPB-201ENST00000265619 PACS2Q86VP3 889 aa10.41□□□□□ -0.74
VAPB-201ENST00000265619 CKAP2LQ8IYA6 745 aa10.41□□□□□ -0.74
VAPB-201ENST00000265619 PTPRUQ92729 1446 aa10.41□□□□□ -0.74
VAPB-201ENST00000265619 ANKRD65E5RJM6 399 aa10.41□□□□□ -0.74
VAPB-201ENST00000265619 APPP05067 770 aa10.41□□□□□ -0.74
VAPB-201ENST00000265619 CASQ1P31415 396 aa10.41□□□□□ -0.74
VAPB-201ENST00000265619 USHBP1Q8N6Y0 703 aa10.41□□□□□ -0.74
VAPB-201ENST00000265619 ORAI2Q96SN7 254 aa10.41□□□□□ -0.74
VAPB-201ENST00000265619 PLEKHG1Q9ULL1 1385 aa10.41□□□□□ -0.74
VAPB-201ENST00000265619 KRT24Q2M2I5 525 aa10.41□□□□□ -0.74
VAPB-201ENST00000265619 TMEM87AQ8NBN3 555 aa10.41□□□□□ -0.74
VAPB-201ENST00000265619 IL25Q9H293 177 aa10.41□□□□□ -0.74
VAPB-201ENST00000265619 TBX22Q9Y458 520 aa10.41□□□□□ -0.74
VAPB-201ENST00000265619 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.41□□□□□ -0.74
VAPB-201ENST00000265619 SULT6B1Q6IMI4 303 aa10.4□□□□□ -0.74
VAPB-201ENST00000265619 FOXR1Q6PIV2 292 aa10.4□□□□□ -0.74
VAPB-201ENST00000265619 FAM83GA6ND36 823 aa10.4□□□□□ -0.74
VAPB-201ENST00000265619 GOLGA6L6A8MZA4 724 aa10.4□□□□□ -0.74
VAPB-201ENST00000265619 UBE2HP62256 183 aa10.4□□□□□ -0.74
VAPB-201ENST00000265619 DNM1Q05193 864 aaKnown RBP10.4□□□□□ -0.74
VAPB-201ENST00000265619 E2F4Q16254 413 aa10.4□□□□□ -0.74
VAPB-201ENST00000265619 NYAP1Q6ZVC0 841 aa10.4□□□□□ -0.74
VAPB-201ENST00000265619 CBX8Q9HC52 389 aa10.4□□□□□ -0.74
VAPB-201ENST00000265619 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.4□□□□□ -0.74
VAPB-201ENST00000265619 IPO8O15397 1037 aaKnown RBP10.4□□□□□ -0.75
VAPB-201ENST00000265619 SASH3O75995 380 aa10.4□□□□□ -0.75
VAPB-201ENST00000265619 CT47B1P0C2W7 299 aaPredicted RBP10.4□□□□□ -0.75
VAPB-201ENST00000265619 ZNF75DP51815 510 aa10.4□□□□□ -0.75
VAPB-201ENST00000265619 TTC21BQ7Z4L5 1316 aa10.4□□□□□ -0.75
VAPB-201ENST00000265619 ZSCAN26Q16670 478 aa10.39□□□□□ -0.75
VAPB-201ENST00000265619 PLA2G4DQ86XP0 818 aa10.39□□□□□ -0.75
VAPB-201ENST00000265619 REXO1L1PQ8IX06 675 aa10.39□□□□□ -0.75
VAPB-201ENST00000265619 PHACTR3Q96KR7 559 aa10.39□□□□□ -0.75
VAPB-201ENST00000265619 ERC2O15083 957 aa10.39□□□□□ -0.75
VAPB-201ENST00000265619 TPM3P06753 285 aa10.39□□□□□ -0.75
VAPB-201ENST00000265619 LIG1P18858 919 aa10.39□□□□□ -0.75
VAPB-201ENST00000265619 BRPF1P55201 1214 aaPredicted RBP10.39□□□□□ -0.75
VAPB-201ENST00000265619 MUM1L1Q5H9M0 696 aa10.39□□□□□ -0.75
VAPB-201ENST00000265619 ERO1AQ96HE7 468 aa10.39□□□□□ -0.75
VAPB-201ENST00000265619 TRIM5Q9C035 493 aa10.39□□□□□ -0.75
VAPB-201ENST00000265619 UBR1Q8IWV7 1749 aa10.39□□□□□ -0.75
VAPB-201ENST00000265619 ANO6Q4KMQ2 910 aa10.39□□□□□ -0.75
VAPB-201ENST00000265619 MRPL50Q8N5N7 158 aaKnown RBP10.39□□□□□ -0.75
VAPB-201ENST00000265619 A0A087WWV3 80 aa10.38□□□□□ -0.75
VAPB-201ENST00000265619 DNAJC21Q5F1R6 531 aaKnown RBP10.38□□□□□ -0.75
VAPB-201ENST00000265619 FAM173BQ6P4H8 233 aa10.38□□□□□ -0.75
VAPB-201ENST00000265619 NCAPGQ9BPX3 1015 aa10.38□□□□□ -0.75
VAPB-201ENST00000265619 DCTPP1Q9H773 170 aa10.38□□□□□ -0.75
VAPB-201ENST00000265619 GUCY2CP25092 1073 aa10.38□□□□□ -0.75
VAPB-201ENST00000265619 SRLQ86TD4 932 aa10.38□□□□□ -0.75
VAPB-201ENST00000265619 FAM200AQ8TCP9 573 aa10.38□□□□□ -0.75
VAPB-201ENST00000265619 RRP15Q9Y3B9 282 aaKnown RBP10.38□□□□□ -0.75
VAPB-201ENST00000265619 WDR33Q9C0J8 1336 aaKnown RBP10.38□□□□□ -0.75
VAPB-201ENST00000265619 ZRANB2O95218 330 aaKnown RBP eCLIP10.37□□□□□ -0.75
VAPB-201ENST00000265619 SLU7O95391 586 aaKnown RBP10.37□□□□□ -0.75
VAPB-201ENST00000265619 SYT1P21579 422 aa10.37□□□□□ -0.75
VAPB-201ENST00000265619 TYRO3Q06418 890 aa10.37□□□□□ -0.75
VAPB-201ENST00000265619 CLIP2Q9UDT6 1046 aa10.37□□□□□ -0.75
VAPB-201ENST00000265619 RAD50Q92878 1312 aa10.37□□□□□ -0.75
VAPB-201ENST00000265619 PTPN14Q15678 1187 aa10.37□□□□□ -0.75
VAPB-201ENST00000265619 SLFNL1Q499Z3 407 aa10.37□□□□□ -0.75
VAPB-201ENST00000265619 CCDC34Q96HJ3 373 aa10.37□□□□□ -0.75
VAPB-201ENST00000265619 PHF8Q9UPP1 1060 aa10.37□□□□□ -0.75
VAPB-201ENST00000265619 RTL1A6NKG5 1358 aa10.37□□□□□ -0.75
VAPB-201ENST00000265619 ZSCAN22P10073 491 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms