RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 SIRT1Q96EB6 747 aa19.64■□□□□ 0.74
PHRF1-201ENST00000264555 C19orf44Q9H6X5 657 aa19.64■□□□□ 0.74
PHRF1-201ENST00000264555 SLC5A1P13866 664 aa19.64■□□□□ 0.73
PHRF1-201ENST00000264555 ZCRB1Q8TBF4 217 aaKnown RBP19.64■□□□□ 0.73
PHRF1-201ENST00000264555 MYOM2P54296 1465 aa19.64■□□□□ 0.73
PHRF1-201ENST00000264555 ZNF213O14771 459 aa19.64■□□□□ 0.73
PHRF1-201ENST00000264555 CHL1O00533 1208 aa19.64■□□□□ 0.73
PHRF1-201ENST00000264555 CAVIN4Q5BKX8 364 aa19.64■□□□□ 0.73
PHRF1-201ENST00000264555 MAP7D2Q96T17 732 aa19.64■□□□□ 0.73
PHRF1-201ENST00000264555 PIP4K2BP78356 416 aa19.63■□□□□ 0.73
PHRF1-201ENST00000264555 SLC39A6Q13433 755 aa19.63■□□□□ 0.73
PHRF1-201ENST00000264555 NAPBQ9H115 298 aa19.63■□□□□ 0.73
PHRF1-201ENST00000264555 GJB2P29033 226 aa19.63■□□□□ 0.73
PHRF1-201ENST00000264555 KLHL40Q2TBA0 621 aa19.63■□□□□ 0.73
PHRF1-201ENST00000264555 ZSCAN30Q86W11 494 aa19.63■□□□□ 0.73
PHRF1-201ENST00000264555 IKQ13123 557 aaPredicted RBP19.63■□□□□ 0.73
PHRF1-201ENST00000264555 SEC24BO95487 1268 aa19.62■□□□□ 0.73
PHRF1-201ENST00000264555 CDK5RAP3Q96JB5 506 aa19.62■□□□□ 0.73
PHRF1-201ENST00000264555 GPTP24298 496 aa19.62■□□□□ 0.73
PHRF1-201ENST00000264555 LDHAL6AQ6ZMR3 332 aa19.62■□□□□ 0.73
PHRF1-201ENST00000264555 CCDC43Q96MW1 224 aaKnown RBP19.62■□□□□ 0.73
PHRF1-201ENST00000264555 LARP6Q9BRS8 491 aaKnown RBP19.62■□□□□ 0.73
PHRF1-201ENST00000264555 SMARCE1Q969G3 411 aa19.61■□□□□ 0.73
PHRF1-201ENST00000264555 TTF1Q15361 905 aaPredicted RBP19.61■□□□□ 0.73
PHRF1-201ENST00000264555 CAMK4Q16566 473 aa19.61■□□□□ 0.73
PHRF1-201ENST00000264555 NEK1Q96PY6 1258 aa19.61■□□□□ 0.73
PHRF1-201ENST00000264555 ERVK-7P63135 1459 aa19.61■□□□□ 0.73
PHRF1-201ENST00000264555 TTC41PQ6P2S7 1318 aa19.61■□□□□ 0.73
PHRF1-201ENST00000264555 MPNDQ8N594 471 aa19.61■□□□□ 0.73
PHRF1-201ENST00000264555 ZFYVE16Q7Z3T8 1539 aa19.61■□□□□ 0.73
PHRF1-201ENST00000264555 C8orf76Q96K31 380 aa19.61■□□□□ 0.73
PHRF1-201ENST00000264555 SYNMO15061 1565 aa19.6■□□□□ 0.73
PHRF1-201ENST00000264555 CBFA2T2O43439 604 aa19.6■□□□□ 0.73
PHRF1-201ENST00000264555 MAGEC2Q9UBF1 373 aaPredicted RBP19.6■□□□□ 0.73
PHRF1-201ENST00000264555 PLEKHG3A1L390 1219 aa19.6■□□□□ 0.73
PHRF1-201ENST00000264555 CCDC196A0A1B0GTZ2 297 aa19.6■□□□□ 0.73
PHRF1-201ENST00000264555 JARID2Q92833 1246 aaPredicted RBP19.6■□□□□ 0.73
PHRF1-201ENST00000264555 TMEM2Q9UHN6 1383 aa19.6■□□□□ 0.73
PHRF1-201ENST00000264555 RNMTO43148 476 aaKnown RBP19.59■□□□□ 0.73
PHRF1-201ENST00000264555 SOGA3Q5TF21 947 aa19.59■□□□□ 0.73
PHRF1-201ENST00000264555 CEP131Q9UPN4 1083 aa19.59■□□□□ 0.73
PHRF1-201ENST00000264555 SMTNL1A8MU46 457 aa19.59■□□□□ 0.73
PHRF1-201ENST00000264555 ZPR1O75312 459 aa19.59■□□□□ 0.73
PHRF1-201ENST00000264555 ADAMTS2O95450 1211 aa19.59■□□□□ 0.73
PHRF1-201ENST00000264555 SAMD1Q6SPF0 538 aaPredicted RBP19.59■□□□□ 0.73
PHRF1-201ENST00000264555 MLH3Q9UHC1 1453 aa19.58■□□□□ 0.73
PHRF1-201ENST00000264555 HMGB2P26583 209 aaKnown RBP19.58■□□□□ 0.73
PHRF1-201ENST00000264555 NFATC2IPQ8NCF5 419 aa19.58■□□□□ 0.72
PHRF1-201ENST00000264555 YEATS2Q9ULM3 1422 aa19.58■□□□□ 0.72
PHRF1-201ENST00000264555 EPS15P42566 896 aa19.57■□□□□ 0.72
PHRF1-201ENST00000264555 G2E3Q7L622 706 aa19.57■□□□□ 0.72
PHRF1-201ENST00000264555 AEBP2Q6ZN18 517 aaPredicted RBP19.57■□□□□ 0.72
PHRF1-201ENST00000264555 RNF41Q9H4P4 317 aaPredicted RBP19.57■□□□□ 0.72
PHRF1-201ENST00000264555 DCAF5Q96JK2 942 aa19.57■□□□□ 0.72
PHRF1-201ENST00000264555 PHAXQ9H814 394 aaKnown RBP19.57■□□□□ 0.72
PHRF1-201ENST00000264555 PLA2R1Q13018 1463 aa19.56■□□□□ 0.72
PHRF1-201ENST00000264555 MINDY4BA8MYZ0 360 aa19.56■□□□□ 0.72
PHRF1-201ENST00000264555 HOXB7P09629 217 aa19.56■□□□□ 0.72
PHRF1-201ENST00000264555 STIM1Q13586 685 aa19.56■□□□□ 0.72
PHRF1-201ENST00000264555 GDPD2Q9HCC8 539 aa19.56■□□□□ 0.72
PHRF1-201ENST00000264555 BRPF1P55201 1214 aaPredicted RBP19.56■□□□□ 0.72
PHRF1-201ENST00000264555 LMBR1LQ6UX01 489 aa19.56■□□□□ 0.72
PHRF1-201ENST00000264555 SNRKQ9NRH2 765 aa19.56■□□□□ 0.72
PHRF1-201ENST00000264555 PRDM15P57071 1507 aaPredicted RBP19.56■□□□□ 0.72
PHRF1-201ENST00000264555 ZCCHC11Q5TAX3 1644 aaKnown RBP19.56■□□□□ 0.72
PHRF1-201ENST00000264555 NAP1L1P55209 391 aaKnown RBP19.56■□□□□ 0.72
PHRF1-201ENST00000264555 GOLGA8BA8MQT2 603 aa19.56■□□□□ 0.72
PHRF1-201ENST00000264555 TEX35Q5T0J7 233 aa19.56■□□□□ 0.72
PHRF1-201ENST00000264555 DDX19AQ9NUU7 478 aaKnown RBP19.56■□□□□ 0.72
PHRF1-201ENST00000264555 CTAGE5O15320 804 aa19.56■□□□□ 0.72
PHRF1-201ENST00000264555 CCT2P78371 535 aaKnown RBP19.56■□□□□ 0.72
PHRF1-201ENST00000264555 RBM8AQ9Y5S9 174 aaKnown RBP19.56■□□□□ 0.72
PHRF1-201ENST00000264555 SLC12A7Q9Y666 1083 aa19.56■□□□□ 0.72
PHRF1-201ENST00000264555 IL15P40933 162 aaPredicted RBP19.55■□□□□ 0.72
PHRF1-201ENST00000264555 DDX46Q7L014 1031 aaKnown RBP19.55■□□□□ 0.72
PHRF1-201ENST00000264555 TRMT2AQ8IZ69 625 aaKnown RBP19.55■□□□□ 0.72
PHRF1-201ENST00000264555 ANO10Q9NW15 660 aa19.55■□□□□ 0.72
PHRF1-201ENST00000264555 UBE2HP62256 183 aa19.55■□□□□ 0.72
PHRF1-201ENST00000264555 PA2G4Q9UQ80 394 aaKnown RBP19.55■□□□□ 0.72
PHRF1-201ENST00000264555 ZSCAN22P10073 491 aaPredicted RBP19.55■□□□□ 0.72
PHRF1-201ENST00000264555 ATP2B2Q01814 1243 aa19.55■□□□□ 0.72
PHRF1-201ENST00000264555 PPFIBP1Q86W92 1011 aa19.55■□□□□ 0.72
PHRF1-201ENST00000264555 ADCY10Q96PN6 1610 aa19.55■□□□□ 0.72
PHRF1-201ENST00000264555 USP26Q9BXU7 913 aa19.55■□□□□ 0.72
PHRF1-201ENST00000264555 CFAP65Q6ZU64 1925 aaKnown RBP19.55■□□□□ 0.72
PHRF1-201ENST00000264555 CWF19L2Q2TBE0 894 aaKnown RBP19.54■□□□□ 0.72
PHRF1-201ENST00000264555 ZNF287Q9HBT7 754 aa19.54■□□□□ 0.72
PHRF1-201ENST00000264555 ZFYP08048 801 aaPredicted RBP19.54■□□□□ 0.72
PHRF1-201ENST00000264555 PDE4CQ08493 712 aa19.54■□□□□ 0.72
PHRF1-201ENST00000264555 CCAR1Q8IX12 1150 aaKnown RBP19.54■□□□□ 0.72
PHRF1-201ENST00000264555 ARHGEF10O15013 1369 aa19.54■□□□□ 0.72
PHRF1-201ENST00000264555 OFD1O75665 1012 aa19.54■□□□□ 0.72
PHRF1-201ENST00000264555 RBM25P49756 843 aaKnown RBP19.54■□□□□ 0.72
PHRF1-201ENST00000264555 GUCY1B3Q02153 619 aa19.54■□□□□ 0.72
PHRF1-201ENST00000264555 UGGT1Q9NYU2 1555 aa19.53■□□□□ 0.72
PHRF1-201ENST00000264555 CHMLP26374 656 aa19.53■□□□□ 0.72
PHRF1-201ENST00000264555 DDX21Q9NR30 783 aaKnown RBP eCLIP19.53■□□□□ 0.72
PHRF1-201ENST00000264555 UQCRFS1P1P0C7P4 283 aa19.53■□□□□ 0.72
PHRF1-201ENST00000264555 CDC5LQ99459 802 aaKnown RBP19.53■□□□□ 0.72
PHRF1-201ENST00000264555 IFIT3O14879 490 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms