RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 KCNQ4P56696 695 aa28.57■■■□□ 2.16
UFD1-201ENST00000263202 LINC00116Q8NCU8 138 aa28.57■■■□□ 2.16
UFD1-201ENST00000263202 C1orf115Q9H7X2 142 aa28.57■■■□□ 2.16
UFD1-201ENST00000263202 ZNF330Q9Y3S2 320 aaPredicted RBP28.57■■■□□ 2.16
UFD1-201ENST00000263202 EP400Q96L91 3159 aa28.56■■■□□ 2.16
UFD1-201ENST00000263202 ALDH1L1O75891 902 aa28.56■■■□□ 2.16
UFD1-201ENST00000263202 LINS1Q8NG48 757 aa28.56■■■□□ 2.16
UFD1-201ENST00000263202 KDM2BQ8NHM5 1336 aa28.56■■■□□ 2.16
UFD1-201ENST00000263202 IGHDP01880 384 aa28.55■■■□□ 2.16
UFD1-201ENST00000263202 ILDR1Q86SU0 546 aaPredicted RBP28.55■■■□□ 2.16
UFD1-201ENST00000263202 USP44Q9H0E7 712 aa28.55■■■□□ 2.16
UFD1-201ENST00000263202 CCNL1Q9UK58 526 aaPredicted RBP28.55■■■□□ 2.16
UFD1-201ENST00000263202 NEXNQ0ZGT2 675 aa28.54■■■□□ 2.16
UFD1-201ENST00000263202 CWF19L2Q2TBE0 894 aaKnown RBP28.54■■■□□ 2.16
UFD1-201ENST00000263202 MYD88Q99836 296 aa28.54■■■□□ 2.16
UFD1-201ENST00000263202 IGKV5-2P06315 115 aa28.53■■■□□ 2.16
UFD1-201ENST00000263202 GNAI3P08754 354 aa28.53■■■□□ 2.16
UFD1-201ENST00000263202 EIF5P55010 431 aaKnown RBP28.53■■■□□ 2.16
UFD1-201ENST00000263202 ZBTB3Q9H5J0 574 aa28.53■■■□□ 2.16
UFD1-201ENST00000263202 KIF6Q6ZMV9 814 aa28.52■■■□□ 2.16
UFD1-201ENST00000263202 CENPQQ7L2Z9 268 aaPredicted RBP28.52■■■□□ 2.16
UFD1-201ENST00000263202 CNTNAP4Q9C0A0 1308 aa28.52■■■□□ 2.16
UFD1-201ENST00000263202 IBTKQ9P2D0 1353 aaPredicted RBP28.52■■■□□ 2.16
UFD1-201ENST00000263202 TNS1Q9HBL0 1735 aaKnown RBP28.5■■■□□ 2.15
UFD1-201ENST00000263202 NUP98P52948 1817 aa28.5■■■□□ 2.15
UFD1-201ENST00000263202 MAP3K15Q6ZN16 1313 aa28.5■■■□□ 2.15
UFD1-201ENST00000263202 NEURL1BA8MQ27 555 aa28.5■■■□□ 2.15
UFD1-201ENST00000263202 RWDD1Q9H446 243 aaPredicted RBP28.5■■■□□ 2.15
UFD1-201ENST00000263202 HDAC1Q13547 482 aaPredicted RBP28.49■■■□□ 2.15
UFD1-201ENST00000263202 ANKRD36CQ5JPF3 1778 aa28.49■■■□□ 2.15
UFD1-201ENST00000263202 C4BP0C0L5 1744 aa28.49■■■□□ 2.15
UFD1-201ENST00000263202 GNAI2P04899 355 aa28.48■■■□□ 2.15
UFD1-201ENST00000263202 RC3H1Q5TC82 1133 aaKnown RBP28.48■■■□□ 2.15
UFD1-201ENST00000263202 UBTFL1P0CB47 393 aaPredicted RBP28.48■■■□□ 2.15
UFD1-201ENST00000263202 NPM2Q86SE8 214 aaKnown RBP28.48■■■□□ 2.15
UFD1-201ENST00000263202 NBPF7P0C2Y1 421 aaPredicted RBP28.47■■■□□ 2.15
UFD1-201ENST00000263202 DZIP3Q86Y13 1208 aaKnown RBP28.47■■■□□ 2.15
UFD1-201ENST00000263202 ARXQ96QS3 562 aa28.47■■■□□ 2.15
UFD1-201ENST00000263202 LRRC4BQ9NT99 713 aa28.47■■■□□ 2.15
UFD1-201ENST00000263202 SIRT2Q8IXJ6 389 aa28.46■■■□□ 2.15
UFD1-201ENST00000263202 ATP5J2-PTCD1G3V325 749 aa28.46■■■□□ 2.15
UFD1-201ENST00000263202 GCKRQ14397 625 aa28.46■■■□□ 2.15
UFD1-201ENST00000263202 C9orf78Q9NZ63 289 aaPredicted RBP28.46■■■□□ 2.15
UFD1-201ENST00000263202 UTYO14607 1347 aa28.45■■■□□ 2.14
UFD1-201ENST00000263202 SLC27A3Q5K4L6 730 aa28.45■■■□□ 2.14
UFD1-201ENST00000263202 CEP85Q6P2H3 762 aa28.45■■■□□ 2.14
UFD1-201ENST00000263202 RPAP2Q8IXW5 612 aaPredicted RBP28.45■■■□□ 2.14
UFD1-201ENST00000263202 ANKRD44Q8N8A2 993 aa28.45■■■□□ 2.14
UFD1-201ENST00000263202 TBC1D2BQ9UPU7 963 aa28.45■■■□□ 2.14
UFD1-201ENST00000263202 COL15A1P39059 1388 aa28.45■■■□□ 2.14
UFD1-201ENST00000263202 BCORQ6W2J9 1755 aa28.44■■■□□ 2.14
UFD1-201ENST00000263202 GRM8O00222 908 aa28.44■■■□□ 2.14
UFD1-201ENST00000263202 GIGYF2Q6Y7W6 1299 aaKnown RBP28.44■■■□□ 2.14
UFD1-201ENST00000263202 ERVV-1B6SEH8 477 aa28.43■■■□□ 2.14
UFD1-201ENST00000263202 TCIRG1Q13488 830 aa28.43■■■□□ 2.14
UFD1-201ENST00000263202 HLFQ16534 295 aa28.43■■■□□ 2.14
UFD1-201ENST00000263202 LRRFIP2Q9Y608 721 aaKnown RBP28.43■■■□□ 2.14
UFD1-201ENST00000263202 PLSCR1O15162 318 aa28.42■■■□□ 2.14
UFD1-201ENST00000263202 ISCA1Q9BUE6 129 aa28.42■■■□□ 2.14
UFD1-201ENST00000263202 RGPD3A6NKT7 1758 aaPredicted RBP28.41■■■□□ 2.14
UFD1-201ENST00000263202 RGPD4Q7Z3J3 1758 aa28.41■■■□□ 2.14
UFD1-201ENST00000263202 RPS6KA4O75676 772 aa28.41■■■□□ 2.14
UFD1-201ENST00000263202 APBA3O96018 575 aa28.41■■■□□ 2.14
UFD1-201ENST00000263202 PROM2Q8N271 834 aa28.4■■■□□ 2.14
UFD1-201ENST00000263202 TXNRD1Q16881 649 aa28.39■■■□□ 2.14
UFD1-201ENST00000263202 CCDC191Q8NCU4 936 aa28.39■■■□□ 2.14
UFD1-201ENST00000263202 CWC25Q9NXE8 425 aaPredicted RBP28.39■■■□□ 2.14
UFD1-201ENST00000263202 A0A087WZG4 1122 aa28.39■■■□□ 2.13
UFD1-201ENST00000263202 GNPATO15228 680 aa28.39■■■□□ 2.13
UFD1-201ENST00000263202 CAMTA2O94983 1202 aa28.39■■■□□ 2.13
UFD1-201ENST00000263202 TRIM28Q13263 835 aaKnown RBP28.39■■■□□ 2.13
UFD1-201ENST00000263202 HSP90AB3PQ58FF7 597 aa28.39■■■□□ 2.13
UFD1-201ENST00000263202 UBR3Q6ZT12 1888 aa28.39■■■□□ 2.13
UFD1-201ENST00000263202 SCN7AQ01118 1682 aa28.38■■■□□ 2.13
UFD1-201ENST00000263202 HDAC5Q9UQL6 1122 aa28.37■■■□□ 2.13
UFD1-201ENST00000263202 C4AP0C0L4 1744 aa28.36■■■□□ 2.13
UFD1-201ENST00000263202 ATP8B2P98198 1209 aa28.36■■■□□ 2.13
UFD1-201ENST00000263202 RTCBQ9Y3I0 505 aaKnown RBP28.36■■■□□ 2.13
UFD1-201ENST00000263202 SMC5Q8IY18 1101 aa28.36■■■□□ 2.13
UFD1-201ENST00000263202 SMIM5Q71RC9 77 aa28.35■■■□□ 2.13
UFD1-201ENST00000263202 SUCLG2Q96I99 432 aa28.35■■■□□ 2.13
UFD1-201ENST00000263202 AK7Q96M32 723 aa28.35■■■□□ 2.13
UFD1-201ENST00000263202 H7C1W4 665 aa28.34■■■□□ 2.13
UFD1-201ENST00000263202 CASP7P55210 303 aa28.34■■■□□ 2.13
UFD1-201ENST00000263202 AMIGO3Q86WK7 504 aa28.34■■■□□ 2.13
UFD1-201ENST00000263202 KAZALD1Q96I82 304 aa28.34■■■□□ 2.13
UFD1-201ENST00000263202 UBE3BQ7Z3V4 1068 aa28.34■■■□□ 2.13
UFD1-201ENST00000263202 PNMA6EA0A0J9YXQ4 647 aa28.33■■■□□ 2.13
UFD1-201ENST00000263202 HMMRO75330 724 aa28.33■■■□□ 2.13
UFD1-201ENST00000263202 JARID2Q92833 1246 aaPredicted RBP28.33■■■□□ 2.13
UFD1-201ENST00000263202 GPTP24298 496 aa28.32■■■□□ 2.12
UFD1-201ENST00000263202 HMGB2P26583 209 aaKnown RBP28.32■■■□□ 2.12
UFD1-201ENST00000263202 ZNF34Q8IZ26 560 aa28.32■■■□□ 2.12
UFD1-201ENST00000263202 NLRP10Q86W26 655 aa28.32■■■□□ 2.12
UFD1-201ENST00000263202 GCC1Q96CN9 775 aa28.32■■■□□ 2.12
UFD1-201ENST00000263202 DCTPP1Q9H773 170 aa28.31■■■□□ 2.12
UFD1-201ENST00000263202 MTX1Q13505 466 aa28.3■■■□□ 2.12
UFD1-201ENST00000263202 PPP1R42Q7Z4L9 355 aa28.3■■■□□ 2.12
UFD1-201ENST00000263202 BICC1Q9H694 974 aaKnown RBP28.3■■■□□ 2.12
UFD1-201ENST00000263202 NARFQ9UHQ1 456 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms