RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 GRM8O00222 908 aa27.79■■■□□ 2.04
SIX3-201ENST00000260653 SEC24BO95487 1268 aa27.79■■■□□ 2.04
SIX3-201ENST00000260653 PLBD2Q8NHP8 589 aa27.78■■■□□ 2.04
SIX3-201ENST00000260653 TTLL7Q6ZT98 887 aa27.77■■■□□ 2.04
SIX3-201ENST00000260653 UTYO14607 1347 aa27.77■■■□□ 2.04
SIX3-201ENST00000260653 SRGAP3O43295 1099 aa27.77■■■□□ 2.04
SIX3-201ENST00000260653 PLEKHM2Q8IWE5 1019 aa27.77■■■□□ 2.04
SIX3-201ENST00000260653 OTUD7AQ8TE49 926 aaPredicted RBP27.77■■■□□ 2.04
SIX3-201ENST00000260653 ACSBG1Q96GR2 724 aa27.77■■■□□ 2.04
SIX3-201ENST00000260653 POLA2Q14181 598 aa27.76■■■□□ 2.03
SIX3-201ENST00000260653 SLC4A9Q96Q91 983 aa27.76■■■□□ 2.03
SIX3-201ENST00000260653 A0A0G2JS52 829 aa27.76■■■□□ 2.03
SIX3-201ENST00000260653 USP21Q9UK80 565 aa27.76■■■□□ 2.03
SIX3-201ENST00000260653 IBTKQ9P2D0 1353 aaPredicted RBP27.76■■■□□ 2.03
SIX3-201ENST00000260653 GCKRQ14397 625 aa27.75■■■□□ 2.03
SIX3-201ENST00000260653 TEX13AQ9BXU3 409 aaPredicted RBP27.75■■■□□ 2.03
SIX3-201ENST00000260653 AFDNP55196 1824 aaKnown RBP27.75■■■□□ 2.03
SIX3-201ENST00000260653 BMP2KLQ5H9B9 411 aa27.74■■■□□ 2.03
SIX3-201ENST00000260653 NUP188Q5SRE5 1749 aa27.74■■■□□ 2.03
SIX3-201ENST00000260653 SUCLG2Q96I99 432 aa27.74■■■□□ 2.03
SIX3-201ENST00000260653 ATP5J2-PTCD1G3V325 749 aa27.73■■■□□ 2.03
SIX3-201ENST00000260653 KAZALD1Q96I82 304 aa27.73■■■□□ 2.03
SIX3-201ENST00000260653 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.72■■■□□ 2.03
SIX3-201ENST00000260653 MTX1Q13505 466 aa27.72■■■□□ 2.03
SIX3-201ENST00000260653 LRRCC1Q9C099 1032 aa27.72■■■□□ 2.03
SIX3-201ENST00000260653 EIF5BO60841 1220 aaKnown RBP27.72■■■□□ 2.03
SIX3-201ENST00000260653 STARD3NLO95772 234 aa27.72■■■□□ 2.03
SIX3-201ENST00000260653 ZNF330Q9Y3S2 320 aaPredicted RBP27.71■■■□□ 2.03
SIX3-201ENST00000260653 ZBTB3Q9H5J0 574 aa27.71■■■□□ 2.03
SIX3-201ENST00000260653 HDAC5Q9UQL6 1122 aa27.71■■■□□ 2.03
SIX3-201ENST00000260653 MEX3CQ5U5Q3 659 aaKnown RBP27.7■■■□□ 2.03
SIX3-201ENST00000260653 BICC1Q9H694 974 aaKnown RBP27.7■■■□□ 2.03
SIX3-201ENST00000260653 SURF6O75683 361 aaKnown RBP27.7■■■□□ 2.02
SIX3-201ENST00000260653 MSH5O43196 834 aa27.69■■■□□ 2.02
SIX3-201ENST00000260653 GSPT1P15170 499 aaKnown RBP27.69■■■□□ 2.02
SIX3-201ENST00000260653 TJP1Q07157 1748 aa27.69■■■□□ 2.02
SIX3-201ENST00000260653 CYP19A1P11511 503 aaPredicted RBP27.68■■■□□ 2.02
SIX3-201ENST00000260653 JARID2Q92833 1246 aaPredicted RBP27.68■■■□□ 2.02
SIX3-201ENST00000260653 IPO9Q96P70 1041 aaKnown RBP27.66■■■□□ 2.02
SIX3-201ENST00000260653 TTC22Q5TAA0 569 aa27.66■■■□□ 2.02
SIX3-201ENST00000260653 KCNQ2O43526 872 aa27.65■■■□□ 2.02
SIX3-201ENST00000260653 UBE3BQ7Z3V4 1068 aa27.65■■■□□ 2.02
SIX3-201ENST00000260653 A0A087WZG4 1122 aa27.64■■■□□ 2.02
SIX3-201ENST00000260653 RAB11FIP3O75154 756 aa27.64■■■□□ 2.01
SIX3-201ENST00000260653 EPHA10Q5JZY3 1008 aa27.64■■■□□ 2.01
SIX3-201ENST00000260653 IL1RAPL2Q9NP60 686 aa27.64■■■□□ 2.01
SIX3-201ENST00000260653 ZBTB1Q9Y2K1 713 aa27.64■■■□□ 2.01
SIX3-201ENST00000260653 THSD7AQ9UPZ6 1657 aa27.63■■■□□ 2.01
SIX3-201ENST00000260653 AFF2P51816 1311 aa27.63■■■□□ 2.01
SIX3-201ENST00000260653 SALL3Q9BXA9 1300 aa27.63■■■□□ 2.01
SIX3-201ENST00000260653 PA2G4Q9UQ80 394 aaKnown RBP27.63■■■□□ 2.01
SIX3-201ENST00000260653 RHPN1Q8TCX5 695 aa27.62■■■□□ 2.01
SIX3-201ENST00000260653 PDE1AP54750 535 aa27.62■■■□□ 2.01
SIX3-201ENST00000260653 NOP58Q9Y2X3 529 aaKnown RBP27.62■■■□□ 2.01
SIX3-201ENST00000260653 CASP7P55210 303 aa27.61■■■□□ 2.01
SIX3-201ENST00000260653 KIF6Q6ZMV9 814 aa27.61■■■□□ 2.01
SIX3-201ENST00000260653 CWC25Q9NXE8 425 aaPredicted RBP27.61■■■□□ 2.01
SIX3-201ENST00000260653 TSHZ3Q63HK5 1081 aa27.6■■■□□ 2.01
SIX3-201ENST00000260653 PALLDQ8WX93 1383 aa27.6■■■□□ 2.01
SIX3-201ENST00000260653 KIF1BPQ96EK5 621 aa27.6■■■□□ 2.01
SIX3-201ENST00000260653 ARXQ96QS3 562 aa27.6■■■□□ 2.01
SIX3-201ENST00000260653 OSBPL3Q9H4L5 887 aa27.6■■■□□ 2.01
SIX3-201ENST00000260653 UPF2Q9HAU5 1272 aaKnown RBP27.6■■■□□ 2.01
SIX3-201ENST00000260653 LOC102724428A0A0B4J2F2 783 aa27.59■■■□□ 2.01
SIX3-201ENST00000260653 MFAP1P55081 439 aaKnown RBP27.59■■■□□ 2.01
SIX3-201ENST00000260653 SIK1P57059 783 aa27.59■■■□□ 2.01
SIX3-201ENST00000260653 HSP90AB4PQ58FF6 505 aa27.59■■■□□ 2.01
SIX3-201ENST00000260653 ATP6V1AP38606 617 aa27.59■■■□□ 2.01
SIX3-201ENST00000260653 GJD4Q96KN9 370 aaPredicted RBP27.59■■■□□ 2.01
SIX3-201ENST00000260653 MX1P20591 662 aa27.58■■■□□ 2.01
SIX3-201ENST00000260653 OS9Q13438 667 aaPredicted RBP27.58■■■□□ 2.01
SIX3-201ENST00000260653 COL15A1P39059 1388 aa27.58■■■□□ 2.01
SIX3-201ENST00000260653 RTL5Q5HYW3 569 aaPredicted RBP27.58■■■□□ 2
SIX3-201ENST00000260653 TBC1D9Q6ZT07 1266 aa27.58■■■□□ 2
SIX3-201ENST00000260653 CCDC191Q8NCU4 936 aa27.58■■■□□ 2
SIX3-201ENST00000260653 H7C1W4 665 aa27.57■■■□□ 2
SIX3-201ENST00000260653 ANP32EQ9BTT0 268 aa27.57■■■□□ 2
SIX3-201ENST00000260653 TCIRG1Q13488 830 aa27.57■■■□□ 2
SIX3-201ENST00000260653 MAP3K15Q6ZN16 1313 aa27.56■■■□□ 2
SIX3-201ENST00000260653 ISCA1Q9BUE6 129 aa27.56■■■□□ 2
SIX3-201ENST00000260653 SDSP20132 328 aa27.56■■■□□ 2
SIX3-201ENST00000260653 ITPK1Q13572 414 aa27.55■■■□□ 2
SIX3-201ENST00000260653 RABL6Q3YEC7 729 aaPredicted RBP27.55■■■□□ 2
SIX3-201ENST00000260653 NUTM1Q86Y26 1132 aa27.55■■■□□ 2
SIX3-201ENST00000260653 TBC1D32Q96NH3 1257 aa27.55■■■□□ 2
SIX3-201ENST00000260653 CDC45O75419 566 aa27.55■■■□□ 2
SIX3-201ENST00000260653 KLHDC4Q8TBB5 520 aa27.55■■■□□ 2
SIX3-201ENST00000260653 FAM182BQ5T319 152 aa27.54■■■□□ 2
SIX3-201ENST00000260653 IL6STP40189 918 aaPredicted RBP27.54■■■□□ 2
SIX3-201ENST00000260653 PTF1AQ7RTS3 328 aa27.54■■■□□ 2
SIX3-201ENST00000260653 SMARCC1Q92922 1105 aaPredicted RBP27.54■■■□□ 2
SIX3-201ENST00000260653 ATRNO75882 1429 aa27.53■■■□□ 2
SIX3-201ENST00000260653 CICQ96RK0 1608 aaPredicted RBP27.53■■■□□ 2
SIX3-201ENST00000260653 HLFQ16534 295 aa27.53■■■□□ 2
SIX3-201ENST00000260653 INTS5Q6P9B9 1019 aaKnown RBP27.53■■■□□ 2
SIX3-201ENST00000260653 CRKLP46109 303 aaKnown RBP27.52■■■□□ 2
SIX3-201ENST00000260653 GIGYF2Q6Y7W6 1299 aaKnown RBP27.52■■■□□ 2
SIX3-201ENST00000260653 STAP2Q9UGK3 403 aa27.52■■■□□ 2
SIX3-201ENST00000260653 SIL1Q9H173 461 aa27.52■■■□□ 2
SIX3-201ENST00000260653 CCDC87Q9NVE4 849 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms