RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 TTLL7Q6ZT98 887 aa21.63■■□□□ 1.05
SDCBP-201ENST00000260130 POLRMTO00411 1230 aaKnown RBP21.62■■□□□ 1.05
SDCBP-201ENST00000260130 RGL2O15211 777 aa21.62■■□□□ 1.05
SDCBP-201ENST00000260130 TBC1D9BQ66K14 1250 aa21.62■■□□□ 1.05
SDCBP-201ENST00000260130 KIF6Q6ZMV9 814 aa21.62■■□□□ 1.05
SDCBP-201ENST00000260130 BICDL1Q6ZP65 573 aa21.62■■□□□ 1.05
SDCBP-201ENST00000260130 ZNF652Q9Y2D9 606 aa21.62■■□□□ 1.05
SDCBP-201ENST00000260130 TWISTNBQ3B726 338 aaPredicted RBP21.61■■□□□ 1.05
SDCBP-201ENST00000260130 CD2APQ9Y5K6 639 aa21.61■■□□□ 1.05
SDCBP-201ENST00000260130 ERVV-1B6SEH8 477 aa21.61■■□□□ 1.05
SDCBP-201ENST00000260130 MAP3K15Q6ZN16 1313 aa21.6■■□□□ 1.05
SDCBP-201ENST00000260130 SCN7AQ01118 1682 aa21.6■■□□□ 1.05
SDCBP-201ENST00000260130 EXOSC9Q06265 439 aaKnown RBP21.6■■□□□ 1.05
SDCBP-201ENST00000260130 HLFQ16534 295 aa21.6■■□□□ 1.05
SDCBP-201ENST00000260130 CCDC30Q5VVM6 783 aa21.6■■□□□ 1.05
SDCBP-201ENST00000260130 COPS6Q7L5N1 327 aa21.6■■□□□ 1.05
SDCBP-201ENST00000260130 SETDB2Q96T68 719 aa21.59■■□□□ 1.05
SDCBP-201ENST00000260130 HYPKQ9NX55 129 aa21.59■■□□□ 1.05
SDCBP-201ENST00000260130 E9PSI1 815 aa21.58■■□□□ 1.05
SDCBP-201ENST00000260130 SERPINB2P05120 415 aa21.58■■□□□ 1.05
SDCBP-201ENST00000260130 AIMP1Q12904 312 aaKnown RBP21.58■■□□□ 1.05
SDCBP-201ENST00000260130 XAGE3Q8WTP9 111 aa21.58■■□□□ 1.05
SDCBP-201ENST00000260130 ZBTB3Q9H5J0 574 aa21.58■■□□□ 1.05
SDCBP-201ENST00000260130 NLGN2Q8NFZ4 835 aa21.57■■□□□ 1.04
SDCBP-201ENST00000260130 VAMP4O75379 141 aa21.56■■□□□ 1.04
SDCBP-201ENST00000260130 SLFN5Q08AF3 891 aa21.56■■□□□ 1.04
SDCBP-201ENST00000260130 BCORQ6W2J9 1755 aa21.56■■□□□ 1.04
SDCBP-201ENST00000260130 CARMIL3Q8ND23 1372 aa21.55■■□□□ 1.04
SDCBP-201ENST00000260130 GIGYF2Q6Y7W6 1299 aaKnown RBP21.55■■□□□ 1.04
SDCBP-201ENST00000260130 CDCA7LQ96GN5 454 aa21.55■■□□□ 1.04
SDCBP-201ENST00000260130 NIP7Q9Y221 180 aaKnown RBP eCLIP21.55■■□□□ 1.04
SDCBP-201ENST00000260130 HNRNPUQ00839 825 aaKnown RBP eCLIP21.54■■□□□ 1.04
SDCBP-201ENST00000260130 STK31Q9BXU1 1019 aa21.54■■□□□ 1.04
SDCBP-201ENST00000260130 TSHZ2Q9NRE2 1034 aa21.54■■□□□ 1.04
SDCBP-201ENST00000260130 C10orf71Q711Q0 1435 aa21.54■■□□□ 1.04
SDCBP-201ENST00000260130 NEFLP07196 543 aa21.53■■□□□ 1.04
SDCBP-201ENST00000260130 PHAXQ9H814 394 aaKnown RBP21.53■■□□□ 1.04
SDCBP-201ENST00000260130 TCERG1O14776 1098 aaKnown RBP21.53■■□□□ 1.04
SDCBP-201ENST00000260130 ANKRD13DQ6ZTN6 518 aa21.53■■□□□ 1.04
SDCBP-201ENST00000260130 TGFB2P61812 414 aa21.52■■□□□ 1.04
SDCBP-201ENST00000260130 PLBD2Q8NHP8 589 aa21.52■■□□□ 1.04
SDCBP-201ENST00000260130 NBPF5PQ86XG9 351 aaPredicted RBP21.51■■□□□ 1.03
SDCBP-201ENST00000260130 TRMT2AQ8IZ69 625 aaKnown RBP21.51■■□□□ 1.03
SDCBP-201ENST00000260130 ATP10DQ9P241 1426 aa21.5■■□□□ 1.03
SDCBP-201ENST00000260130 SLC4A2P04920 1241 aa21.5■■□□□ 1.03
SDCBP-201ENST00000260130 PRR5LQ6MZQ0 368 aa21.5■■□□□ 1.03
SDCBP-201ENST00000260130 ZNF34Q8IZ26 560 aa21.5■■□□□ 1.03
SDCBP-201ENST00000260130 NPHP1O15259 732 aa21.5■■□□□ 1.03
SDCBP-201ENST00000260130 GPTP24298 496 aa21.5■■□□□ 1.03
SDCBP-201ENST00000260130 HSP90AB3PQ58FF7 597 aa21.5■■□□□ 1.03
SDCBP-201ENST00000260130 TPTE2Q6XPS3 522 aa21.5■■□□□ 1.03
SDCBP-201ENST00000260130 CNBD1Q8NA66 436 aa21.5■■□□□ 1.03
SDCBP-201ENST00000260130 GOLGB1Q14789 3259 aaKnown RBP21.49■■□□□ 1.03
SDCBP-201ENST00000260130 NRXN2Q9P2S2 1712 aa21.49■■□□□ 1.03
SDCBP-201ENST00000260130 DCAF8L1A6NGE4 600 aa21.48■■□□□ 1.03
SDCBP-201ENST00000260130 A0A0G2JLW4 131 aa21.48■■□□□ 1.03
SDCBP-201ENST00000260130 FAM177BA6PVY3 158 aa21.48■■□□□ 1.03
SDCBP-201ENST00000260130 TCIRG1Q13488 830 aa21.48■■□□□ 1.03
SDCBP-201ENST00000260130 RIC3Q7Z5B4 369 aa21.47■■□□□ 1.03
SDCBP-201ENST00000260130 CCDC24Q8N4L8 307 aa21.47■■□□□ 1.03
SDCBP-201ENST00000260130 AFDNP55196 1824 aaKnown RBP21.47■■□□□ 1.03
SDCBP-201ENST00000260130 UBN2Q6ZU65 1347 aa21.47■■□□□ 1.03
SDCBP-201ENST00000260130 NUP98P52948 1817 aa21.47■■□□□ 1.03
SDCBP-201ENST00000260130 KIF13BQ9NQT8 1826 aa21.47■■□□□ 1.03
SDCBP-201ENST00000260130 DDX58O95786 925 aaKnown RBP21.47■■□□□ 1.03
SDCBP-201ENST00000260130 DPEP1P16444 411 aa21.47■■□□□ 1.03
SDCBP-201ENST00000260130 ST5P78524 1137 aa21.47■■□□□ 1.03
SDCBP-201ENST00000260130 PARP10Q53GL7 1025 aa21.47■■□□□ 1.03
SDCBP-201ENST00000260130 BRIP1Q9BX63 1249 aa21.47■■□□□ 1.03
SDCBP-201ENST00000260130 PXDNLA1KZ92 1463 aa21.46■■□□□ 1.03
SDCBP-201ENST00000260130 NYXQ9GZU5 481 aa21.46■■□□□ 1.03
SDCBP-201ENST00000260130 SUSD4Q5VX71 490 aa21.46■■□□□ 1.03
SDCBP-201ENST00000260130 G2E3Q7L622 706 aa21.46■■□□□ 1.03
SDCBP-201ENST00000260130 GTF2E1P29083 439 aaPredicted RBP21.45■■□□□ 1.02
SDCBP-201ENST00000260130 UTRNP46939 3433 aa21.45■■□□□ 1.02
SDCBP-201ENST00000260130 GPR162Q16538 588 aa21.44■■□□□ 1.02
SDCBP-201ENST00000260130 PPP1R42Q7Z4L9 355 aa21.44■■□□□ 1.02
SDCBP-201ENST00000260130 KCNA3P22001 575 aa21.44■■□□□ 1.02
SDCBP-201ENST00000260130 CHRNA5P30532 468 aa21.44■■□□□ 1.02
SDCBP-201ENST00000260130 PDE6BP35913 854 aa21.44■■□□□ 1.02
SDCBP-201ENST00000260130 NLRP10Q86W26 655 aa21.43■■□□□ 1.02
SDCBP-201ENST00000260130 FLIIQ13045 1269 aa21.43■■□□□ 1.02
SDCBP-201ENST00000260130 KSR2Q6VAB6 950 aa21.43■■□□□ 1.02
SDCBP-201ENST00000260130 IBTKQ9P2D0 1353 aaPredicted RBP21.42■■□□□ 1.02
SDCBP-201ENST00000260130 ISCA1Q9BUE6 129 aa21.42■■□□□ 1.02
SDCBP-201ENST00000260130 WWC3Q9ULE0 1092 aa21.42■■□□□ 1.02
SDCBP-201ENST00000260130 PDZRN3Q9UPQ7 1066 aa21.42■■□□□ 1.02
SDCBP-201ENST00000260130 ZBED9Q6R2W3 1325 aa21.42■■□□□ 1.02
SDCBP-201ENST00000260130 PI4KAP2A4QPH2 592 aa21.41■■□□□ 1.02
SDCBP-201ENST00000260130 ATP5J2-PTCD1G3V325 749 aa21.41■■□□□ 1.02
SDCBP-201ENST00000260130 H0YIN7 160 aa21.41■■□□□ 1.02
SDCBP-201ENST00000260130 NTSR2O95665 410 aa21.41■■□□□ 1.02
SDCBP-201ENST00000260130 NUTM1Q86Y26 1132 aa21.41■■□□□ 1.02
SDCBP-201ENST00000260130 C2CD5Q86YS7 1000 aa21.41■■□□□ 1.02
SDCBP-201ENST00000260130 PI4KAP1Q8N8J0 262 aa21.41■■□□□ 1.02
SDCBP-201ENST00000260130 ZNF428Q96B54 188 aa21.41■■□□□ 1.02
SDCBP-201ENST00000260130 UTP14AQ9BVJ6 771 aaKnown RBP21.41■■□□□ 1.02
SDCBP-201ENST00000260130 PIM2Q9P1W9 311 aa21.41■■□□□ 1.02
SDCBP-201ENST00000260130 MAP3K2Q9Y2U5 619 aa21.41■■□□□ 1.02
SDCBP-201ENST00000260130 ERFEQ4G0M1 354 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms