RNA–Protein interactions for RNA: ENST00000256443.7

CDK7-201, Transcript of cyclin dependent kinase 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK7, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-201ENST00000256443 DDX21Q9NR30 783 aaKnown RBP eCLIP16.72■□□□□ 0.27
CDK7-201ENST00000256443 PXDNLA1KZ92 1463 aa16.72■□□□□ 0.27
CDK7-201ENST00000256443 MAP3K15Q6ZN16 1313 aa16.72■□□□□ 0.27
CDK7-201ENST00000256443 SENP3-EIF4A1A0A087X0R7 540 aa16.71■□□□□ 0.27
CDK7-201ENST00000256443 LRP10Q7Z4F1 713 aa16.7■□□□□ 0.26
CDK7-201ENST00000256443 PELP1Q8IZL8 1130 aaKnown RBP16.7■□□□□ 0.26
CDK7-201ENST00000256443 DBF4Q9UBU7 674 aaPredicted RBP16.7■□□□□ 0.26
CDK7-201ENST00000256443 SALL2Q9Y467 1007 aaPredicted RBP16.7■□□□□ 0.26
CDK7-201ENST00000256443 BRCA1P38398 1863 aaKnown RBP16.7■□□□□ 0.26
CDK7-201ENST00000256443 GRIN3BO60391 1043 aa16.7■□□□□ 0.26
CDK7-201ENST00000256443 TTLL7Q6ZT98 887 aa16.7■□□□□ 0.26
CDK7-201ENST00000256443 NECTIN2Q92692 538 aa16.7■□□□□ 0.26
CDK7-201ENST00000256443 CHD4Q14839 1912 aa16.69■□□□□ 0.26
CDK7-201ENST00000256443 CHPF2Q9P2E5 772 aa16.69■□□□□ 0.26
CDK7-201ENST00000256443 NIP7Q9Y221 180 aaKnown RBP eCLIP16.69■□□□□ 0.26
CDK7-201ENST00000256443 ATP10DQ9P241 1426 aa16.68■□□□□ 0.26
CDK7-201ENST00000256443 DLEC1Q9Y238 1755 aa16.68■□□□□ 0.26
CDK7-201ENST00000256443 NPHP1O15259 732 aa16.68■□□□□ 0.26
CDK7-201ENST00000256443 HLFQ16534 295 aa16.68■□□□□ 0.26
CDK7-201ENST00000256443 PROSER3Q2NL68 480 aa16.68■□□□□ 0.26
CDK7-201ENST00000256443 PRR5LQ6MZQ0 368 aa16.68■□□□□ 0.26
CDK7-201ENST00000256443 GIGYF2Q6Y7W6 1299 aaKnown RBP16.68■□□□□ 0.26
CDK7-201ENST00000256443 CNBD1Q8NA66 436 aa16.68■□□□□ 0.26
CDK7-201ENST00000256443 TSR2Q969E8 191 aaKnown RBP16.68■□□□□ 0.26
CDK7-201ENST00000256443 HYPKQ9NX55 129 aa16.68■□□□□ 0.26
CDK7-201ENST00000256443 PDZRN3Q9UPQ7 1066 aa16.68■□□□□ 0.26
CDK7-201ENST00000256443 ANKRD36CQ5JPF3 1778 aa16.67■□□□□ 0.26
CDK7-201ENST00000256443 A0A0G2JLW4 131 aa16.67■□□□□ 0.26
CDK7-201ENST00000256443 ELL2O00472 640 aaPredicted RBP16.67■□□□□ 0.26
CDK7-201ENST00000256443 ANXA1P04083 346 aa16.67■□□□□ 0.26
CDK7-201ENST00000256443 DPEP1P16444 411 aa16.67■□□□□ 0.26
CDK7-201ENST00000256443 ST5P78524 1137 aa16.67■□□□□ 0.26
CDK7-201ENST00000256443 COPS6Q7L5N1 327 aa16.67■□□□□ 0.26
CDK7-201ENST00000256443 C8orf58Q8NAV2 365 aa16.67■□□□□ 0.26
CDK7-201ENST00000256443 ZBTB3Q9H5J0 574 aa16.67■□□□□ 0.26
CDK7-201ENST00000256443 ANKRD31Q8N7Z5 1873 aa16.66■□□□□ 0.26
CDK7-201ENST00000256443 YBX3P16989 372 aaKnown RBP eCLIP16.66■□□□□ 0.261e-6■■□□□ 12.8
CDK7-201ENST00000256443 CCDC30Q5VVM6 783 aa16.66■□□□□ 0.26
CDK7-201ENST00000256443 TPTE2Q6XPS3 522 aa16.66■□□□□ 0.26
CDK7-201ENST00000256443 NBPF5PQ86XG9 351 aaPredicted RBP16.66■□□□□ 0.26
CDK7-201ENST00000256443 XAGE3Q8WTP9 111 aa16.66■□□□□ 0.26
CDK7-201ENST00000256443 BRIP1Q9BX63 1249 aa16.66■□□□□ 0.26
CDK7-201ENST00000256443 MYH16Q9H6N6 1097 aa16.66■□□□□ 0.26
CDK7-201ENST00000256443 ARFGEF1Q9Y6D6 1849 aa16.65■□□□□ 0.26
CDK7-201ENST00000256443 IBTKQ9P2D0 1353 aaPredicted RBP16.65■□□□□ 0.26
CDK7-201ENST00000256443 FANCIQ9NVI1 1328 aa16.65■□□□□ 0.26
CDK7-201ENST00000256443 PDE6BP35913 854 aa16.65■□□□□ 0.26
CDK7-201ENST00000256443 GOLGA2Q08379 1002 aa16.65■□□□□ 0.26
CDK7-201ENST00000256443 HSP90AB3PQ58FF7 597 aa16.65■□□□□ 0.26
CDK7-201ENST00000256443 NYXQ9GZU5 481 aa16.65■□□□□ 0.26
CDK7-201ENST00000256443 PIM2Q9P1W9 311 aa16.65■□□□□ 0.26
CDK7-201ENST00000256443 CACNA1FO60840 1977 aa16.65■□□□□ 0.26
CDK7-201ENST00000256443 ZNF521Q96K83 1311 aa16.64■□□□□ 0.25
CDK7-201ENST00000256443 AIMP1Q12904 312 aaKnown RBP16.64■□□□□ 0.25
CDK7-201ENST00000256443 TWISTNBQ3B726 338 aaPredicted RBP16.64■□□□□ 0.25
CDK7-201ENST00000256443 H0YIN7 160 aa16.63■□□□□ 0.25
CDK7-201ENST00000256443 KCNA3P22001 575 aa16.63■□□□□ 0.25
CDK7-201ENST00000256443 PARP10Q53GL7 1025 aa16.63■□□□□ 0.25
CDK7-201ENST00000256443 ZNF34Q8IZ26 560 aa16.63■□□□□ 0.25
CDK7-201ENST00000256443 MIER1Q8N108 512 aa16.63■□□□□ 0.25
CDK7-201ENST00000256443 TSPYL6Q8N831 410 aa16.63■□□□□ 0.25
CDK7-201ENST00000256443 CHRNA5P30532 468 aa16.62■□□□□ 0.25
CDK7-201ENST00000256443 PLBD2Q8NHP8 589 aa16.62■□□□□ 0.25
CDK7-201ENST00000256443 STK31Q9BXU1 1019 aa16.62■□□□□ 0.25
CDK7-201ENST00000256443 BCS1LQ9Y276 419 aa16.62■□□□□ 0.25
CDK7-201ENST00000256443 GTF2E1P29083 439 aaPredicted RBP16.62■□□□□ 0.25
CDK7-201ENST00000256443 ANKRD13DQ6ZTN6 518 aa16.62■□□□□ 0.25
CDK7-201ENST00000256443 PPP1R42Q7Z4L9 355 aa16.62■□□□□ 0.25
CDK7-201ENST00000256443 C2CD5Q86YS7 1000 aa16.62■□□□□ 0.25
CDK7-201ENST00000256443 ARFGEF2Q9Y6D5 1785 aa16.61■□□□□ 0.25
CDK7-201ENST00000256443 GPTP24298 496 aa16.61■□□□□ 0.25
CDK7-201ENST00000256443 DALRD3Q5D0E6 543 aaKnown RBP16.61■□□□□ 0.25
CDK7-201ENST00000256443 WWC3Q9ULE0 1092 aa16.61■□□□□ 0.25
CDK7-201ENST00000256443 COL11A2P13942 1736 aaPredicted RBP16.61■□□□□ 0.25
CDK7-201ENST00000256443 RIC1Q4ADV7 1423 aa16.6■□□□□ 0.25
CDK7-201ENST00000256443 RNF123Q5XPI4 1314 aa16.6■□□□□ 0.25
CDK7-201ENST00000256443 UBN2Q6ZU65 1347 aa16.6■□□□□ 0.25
CDK7-201ENST00000256443 FAM177BA6PVY3 158 aa16.6■□□□□ 0.25
CDK7-201ENST00000256443 DDX58O95786 925 aaKnown RBP16.6■□□□□ 0.25
CDK7-201ENST00000256443 EXOSC9Q06265 439 aaKnown RBP16.6■□□□□ 0.25
CDK7-201ENST00000256443 TCIRG1Q13488 830 aa16.6■□□□□ 0.25
CDK7-201ENST00000256443 SPINK5Q9NQ38 1064 aaPredicted RBP16.6■□□□□ 0.25
CDK7-201ENST00000256443 YY1P25490 414 aa16.59■□□□□ 0.25
CDK7-201ENST00000256443 CCDC24Q8N4L8 307 aa16.59■□□□□ 0.25
CDK7-201ENST00000256443 E9PSI1 815 aa16.58■□□□□ 0.24
CDK7-201ENST00000256443 SUSD4Q5VX71 490 aa16.58■□□□□ 0.24
CDK7-201ENST00000256443 TTLL6Q8N841 843 aa16.58■□□□□ 0.24
CDK7-201ENST00000256443 PHAXQ9H814 394 aaKnown RBP16.58■□□□□ 0.24
CDK7-201ENST00000256443 KLRG2A4D1S0 409 aaPredicted RBP16.57■□□□□ 0.24
CDK7-201ENST00000256443 VAMP4O75379 141 aa16.57■□□□□ 0.24
CDK7-201ENST00000256443 NTSR2O95665 410 aa16.57■□□□□ 0.24
CDK7-201ENST00000256443 STYK1Q6J9G0 422 aa16.57■□□□□ 0.24
CDK7-201ENST00000256443 RIC3Q7Z5B4 369 aa16.57■□□□□ 0.24
CDK7-201ENST00000256443 MASTLQ96GX5 879 aa16.57■□□□□ 0.24
CDK7-201ENST00000256443 UTP14AQ9BVJ6 771 aaKnown RBP16.57■□□□□ 0.24
CDK7-201ENST00000256443 SRGNP10124 158 aa16.56■□□□□ 0.24
CDK7-201ENST00000256443 NLRP10Q86W26 655 aa16.56■□□□□ 0.24
CDK7-201ENST00000256443 NUTM1Q86Y26 1132 aa16.56■□□□□ 0.24
CDK7-201ENST00000256443 CNKSR1Q969H4 720 aa16.56■□□□□ 0.24
CDK7-201ENST00000256443 ZNF622Q969S3 477 aaKnown RBP eCLIP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms