RNA–Protein interactions for RNA: ENST00000256001.12

ACTR3B-201, Transcript of ARP3 actin related protein 3 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTR3B, Length 2,216 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3B-201ENST00000256001 METTL22Q9BUU2 404 aaPredicted RBP31.35■■■□□ 2.61
ACTR3B-201ENST00000256001 LRP10Q7Z4F1 713 aa31.34■■■□□ 2.61
ACTR3B-201ENST00000256001 COL5A2P05997 1499 aaPredicted RBP31.34■■■□□ 2.61
ACTR3B-201ENST00000256001 TNPO1Q92973 898 aaKnown RBP31.34■■■□□ 2.61
ACTR3B-201ENST00000256001 RAB3GAP1Q15042 981 aa31.33■■■□□ 2.61
ACTR3B-201ENST00000256001 ERC1Q8IUD2 1116 aa31.33■■■□□ 2.61
ACTR3B-201ENST00000256001 MCCP23508 829 aa31.32■■■□□ 2.6
ACTR3B-201ENST00000256001 GCKRQ14397 625 aa31.32■■■□□ 2.6
ACTR3B-201ENST00000256001 PARP4Q9UKK3 1724 aaKnown RBP31.32■■■□□ 2.6
ACTR3B-201ENST00000256001 STRN4Q9NRL3 753 aa31.31■■■□□ 2.6
ACTR3B-201ENST00000256001 TTC41PQ6P2S7 1318 aa31.31■■■□□ 2.6
ACTR3B-201ENST00000256001 CNTROBQ8N137 903 aa31.3■■■□□ 2.6
ACTR3B-201ENST00000256001 USP42Q9H9J4 1324 aaKnown RBP31.3■■■□□ 2.6
ACTR3B-201ENST00000256001 IL2RBP14784 551 aa31.29■■■□□ 2.6
ACTR3B-201ENST00000256001 CARD10Q9BWT7 1032 aa31.29■■■□□ 2.6
ACTR3B-201ENST00000256001 GLRX3O76003 335 aaKnown RBP31.28■■■□□ 2.6
ACTR3B-201ENST00000256001 IL25Q9H293 177 aa31.28■■■□□ 2.6
ACTR3B-201ENST00000256001 IFIT2P09913 472 aaKnown RBP31.28■■■□□ 2.6
ACTR3B-201ENST00000256001 EVA1CP58658 441 aa31.28■■■□□ 2.6
ACTR3B-201ENST00000256001 G3BP1Q13283 466 aaKnown RBP eCLIP31.28■■■□□ 2.6
ACTR3B-201ENST00000256001 DDX11L8A8MPP1 907 aa31.27■■■□□ 2.6
ACTR3B-201ENST00000256001 DDX54Q8TDD1 881 aaKnown RBP31.27■■■□□ 2.6
ACTR3B-201ENST00000256001 PALD1Q9ULE6 856 aa31.27■■■□□ 2.6
ACTR3B-201ENST00000256001 ERVV-2B6SEH9 535 aa31.26■■■□□ 2.6
ACTR3B-201ENST00000256001 AK9Q5TCS8 1911 aa31.26■■■□□ 2.59
ACTR3B-201ENST00000256001 NEK4P51957 841 aa31.26■■■□□ 2.59
ACTR3B-201ENST00000256001 ECHDC1Q9NTX5 307 aa31.26■■■□□ 2.59
ACTR3B-201ENST00000256001 AACSQ86V21 672 aa31.25■■■□□ 2.59
ACTR3B-201ENST00000256001 GPATCH3Q96I76 525 aa31.25■■■□□ 2.59
ACTR3B-201ENST00000256001 GBP4Q96PP9 640 aa31.25■■■□□ 2.59
ACTR3B-201ENST00000256001 ABCA3Q99758 1704 aa31.25■■■□□ 2.59
ACTR3B-201ENST00000256001 ANAPC15P60006 121 aa31.25■■■□□ 2.59
ACTR3B-201ENST00000256001 SASH1O94885 1247 aa31.24■■■□□ 2.59
ACTR3B-201ENST00000256001 TRAK2O60296 914 aa31.24■■■□□ 2.59
ACTR3B-201ENST00000256001 EPHA10Q5JZY3 1008 aa31.24■■■□□ 2.59
ACTR3B-201ENST00000256001 SIL1Q9H173 461 aa31.24■■■□□ 2.59
ACTR3B-201ENST00000256001 GLI3P10071 1580 aa31.23■■■□□ 2.59
ACTR3B-201ENST00000256001 NKX1-1Q15270 411 aaPredicted RBP31.23■■■□□ 2.59
ACTR3B-201ENST00000256001 JARID2Q92833 1246 aaPredicted RBP31.23■■■□□ 2.59
ACTR3B-201ENST00000256001 ATP5J2-PTCD1G3V325 749 aa31.21■■■□□ 2.59
ACTR3B-201ENST00000256001 SGSM2O43147 1006 aa31.21■■■□□ 2.59
ACTR3B-201ENST00000256001 PTCD1O75127 700 aaKnown RBP31.21■■■□□ 2.59
ACTR3B-201ENST00000256001 SSFA2P28290 1259 aa31.21■■■□□ 2.59
ACTR3B-201ENST00000256001 PLBD2Q8NHP8 589 aa31.21■■■□□ 2.59
ACTR3B-201ENST00000256001 KLHDC4Q8TBB5 520 aa31.21■■■□□ 2.59
ACTR3B-201ENST00000256001 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.21■■■□□ 2.59
ACTR3B-201ENST00000256001 EPB41L2O43491 1005 aaKnown RBP31.21■■■□□ 2.59
ACTR3B-201ENST00000256001 LAMB4A4D0S4 1761 aa31.2■■■□□ 2.59
ACTR3B-201ENST00000256001 NBPF26B4DH59 902 aa31.2■■■□□ 2.58
ACTR3B-201ENST00000256001 NBPF14Q5TI25 921 aa31.2■■■□□ 2.58
ACTR3B-201ENST00000256001 NBPF10Q6P3W6 841 aaKnown RBP31.2■■■□□ 2.58
ACTR3B-201ENST00000256001 UBE3BQ7Z3V4 1068 aa31.2■■■□□ 2.58
ACTR3B-201ENST00000256001 NBPF15Q8N660 670 aa31.2■■■□□ 2.58
ACTR3B-201ENST00000256001 EAF2Q96CJ1 260 aaPredicted RBP31.2■■■□□ 2.58
ACTR3B-201ENST00000256001 CWC27Q6UX04 472 aaKnown RBP31.19■■■□□ 2.58
ACTR3B-201ENST00000256001 ERBB4Q15303 1308 aa31.19■■■□□ 2.58
ACTR3B-201ENST00000256001 CCDC8Q9H0W5 538 aaPredicted RBP31.18■■■□□ 2.58
ACTR3B-201ENST00000256001 CWC22Q9HCG8 908 aaKnown RBP31.18■■■□□ 2.58
ACTR3B-201ENST00000256001 A0A087WZG4 1122 aa31.17■■■□□ 2.58
ACTR3B-201ENST00000256001 GZF1Q9H116 711 aaPredicted RBP31.17■■■□□ 2.58
ACTR3B-201ENST00000256001 ARFGEF2Q9Y6D5 1785 aa31.17■■■□□ 2.58
ACTR3B-201ENST00000256001 HSPA4P34932 840 aa31.17■■■□□ 2.58
ACTR3B-201ENST00000256001 ZGPATQ8N5A5 531 aaKnown RBP31.17■■■□□ 2.58
ACTR3B-201ENST00000256001 NHSL1Q5SYE7 1610 aa31.16■■■□□ 2.58
ACTR3B-201ENST00000256001 DIAPH3Q9NSV4 1193 aa31.16■■■□□ 2.58
ACTR3B-201ENST00000256001 MCM2P49736 904 aa31.16■■■□□ 2.58
ACTR3B-201ENST00000256001 IL17RAQ96F46 866 aa31.16■■■□□ 2.58
ACTR3B-201ENST00000256001 AFDNP55196 1824 aaKnown RBP31.15■■■□□ 2.58
ACTR3B-201ENST00000256001 NUCB2P80303 420 aa31.15■■■□□ 2.58
ACTR3B-201ENST00000256001 RAD50Q92878 1312 aa31.15■■■□□ 2.58
ACTR3B-201ENST00000256001 A1BGP04217 495 aa31.14■■■□□ 2.58
ACTR3B-201ENST00000256001 KIAA1211Q6ZU35 1233 aa31.14■■■□□ 2.58
ACTR3B-201ENST00000256001 TMX3Q96JJ7 454 aa31.14■■■□□ 2.58
ACTR3B-201ENST00000256001 LSG1Q9H089 658 aaKnown RBP31.14■■■□□ 2.58
ACTR3B-201ENST00000256001 KCPQ6ZWJ8 1503 aa31.14■■■□□ 2.57
ACTR3B-201ENST00000256001 TTLL7Q6ZT98 887 aa31.13■■■□□ 2.57
ACTR3B-201ENST00000256001 EVI5LQ96CN4 794 aa31.13■■■□□ 2.57
ACTR3B-201ENST00000256001 TLR7Q9NYK1 1049 aaKnown RBP31.13■■■□□ 2.57
ACTR3B-201ENST00000256001 UBR2Q8IWV8 1755 aa31.13■■■□□ 2.57
ACTR3B-201ENST00000256001 UPF3BQ9BZI7 483 aaKnown RBP31.13■■■□□ 2.57
ACTR3B-201ENST00000256001 SHANK3Q9BYB0 1731 aa31.13■■■□□ 2.57
ACTR3B-201ENST00000256001 RUFY2Q8WXA3 655 aa31.12■■■□□ 2.57
ACTR3B-201ENST00000256001 COPRSQ9NQ92 184 aa31.12■■■□□ 2.57
ACTR3B-201ENST00000256001 RABL6Q3YEC7 729 aaPredicted RBP31.12■■■□□ 2.57
ACTR3B-201ENST00000256001 RFX5P48382 616 aaPredicted RBP31.1■■■□□ 2.57
ACTR3B-201ENST00000256001 BTG4Q9NY30 223 aa31.1■■■□□ 2.57
ACTR3B-201ENST00000256001 COL15A1P39059 1388 aa31.1■■■□□ 2.57
ACTR3B-201ENST00000256001 PTPN12Q05209 780 aaKnown RBP31.1■■■□□ 2.57
ACTR3B-201ENST00000256001 CLEC17AQ6ZS10 378 aa31.1■■■□□ 2.57
ACTR3B-201ENST00000256001 CASP7P55210 303 aa31.09■■■□□ 2.57
ACTR3B-201ENST00000256001 PKP1Q13835 747 aa31.09■■■□□ 2.57
ACTR3B-201ENST00000256001 NOL8Q76FK4 1167 aaKnown RBP31.09■■■□□ 2.57
ACTR3B-201ENST00000256001 TMOD3Q9NYL9 352 aa31.09■■■□□ 2.57
ACTR3B-201ENST00000256001 PAPPAQ13219 1627 aa31.09■■■□□ 2.57
ACTR3B-201ENST00000256001 CYP2E1P05181 493 aaPredicted RBP31.08■■■□□ 2.57
ACTR3B-201ENST00000256001 PTMSP20962 102 aa31.08■■■□□ 2.57
ACTR3B-201ENST00000256001 BAG4O95429 457 aaKnown RBP31.08■■■□□ 2.57
ACTR3B-201ENST00000256001 SNX14Q9Y5W7 946 aa31.07■■■□□ 2.56
ACTR3B-201ENST00000256001 TNS2Q63HR2 1409 aa31.07■■■□□ 2.56
ACTR3B-201ENST00000256001 GOLGA6L22H0YM25 854 aa31.06■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms