RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 TNS2Q63HR2 1409 aa28.06■■■□□ 2.08
HOXD9-201ENST00000249499 COL15A1P39059 1388 aa28.06■■■□□ 2.08
HOXD9-201ENST00000249499 RABEP1Q15276 862 aa28.06■■■□□ 2.08
HOXD9-201ENST00000249499 STRN4Q9NRL3 753 aa28.06■■■□□ 2.08
HOXD9-201ENST00000249499 LRP6O75581 1613 aa28.05■■■□□ 2.08
HOXD9-201ENST00000249499 KCPQ6ZWJ8 1503 aa28.05■■■□□ 2.08
HOXD9-201ENST00000249499 SLKQ9H2G2 1235 aaPredicted RBP28.05■■■□□ 2.08
HOXD9-201ENST00000249499 EPB41L2O43491 1005 aaKnown RBP28.04■■■□□ 2.08
HOXD9-201ENST00000249499 GCKRQ14397 625 aa28.04■■■□□ 2.08
HOXD9-201ENST00000249499 IL1RAPL2Q9NP60 686 aa28.03■■■□□ 2.08
HOXD9-201ENST00000249499 TTC41PQ6P2S7 1318 aa28.03■■■□□ 2.08
HOXD9-201ENST00000249499 SUCLG2Q96I99 432 aa28.02■■■□□ 2.08
HOXD9-201ENST00000249499 PLBD2Q8NHP8 589 aa28.02■■■□□ 2.08
HOXD9-201ENST00000249499 CHMP5Q9NZZ3 219 aa28.02■■■□□ 2.08
HOXD9-201ENST00000249499 KAZALD1Q96I82 304 aa28.01■■■□□ 2.07
HOXD9-201ENST00000249499 MYD88Q99836 296 aa28■■■□□ 2.07
HOXD9-201ENST00000249499 ARFGEF2Q9Y6D5 1785 aa28■■■□□ 2.07
HOXD9-201ENST00000249499 OS9Q13438 667 aaPredicted RBP28■■■□□ 2.07
HOXD9-201ENST00000249499 CLASRPQ8N2M8 674 aaKnown RBP28■■■□□ 2.07
HOXD9-201ENST00000249499 BICC1Q9H694 974 aaKnown RBP28■■■□□ 2.07
HOXD9-201ENST00000249499 SPATA31A6Q5VVP1 1343 aa27.99■■■□□ 2.07
HOXD9-201ENST00000249499 NUTM2BA6NNL0 878 aaPredicted RBP27.99■■■□□ 2.07
HOXD9-201ENST00000249499 NUTM2EB1AL46 878 aaPredicted RBP27.99■■■□□ 2.07
HOXD9-201ENST00000249499 NUTM2AQ8IVF1 878 aaPredicted RBP27.99■■■□□ 2.07
HOXD9-201ENST00000249499 PI4K2BQ8TCG2 481 aa27.99■■■□□ 2.07
HOXD9-201ENST00000249499 ESYT1Q9BSJ8 1104 aa27.99■■■□□ 2.07
HOXD9-201ENST00000249499 TRIM6-TRIM34B2RNG4 842 aa27.98■■■□□ 2.07
HOXD9-201ENST00000249499 CHMLP26374 656 aa27.98■■■□□ 2.07
HOXD9-201ENST00000249499 TSHZ3Q63HK5 1081 aa27.98■■■□□ 2.07
HOXD9-201ENST00000249499 DDX54Q8TDD1 881 aaKnown RBP27.98■■■□□ 2.07
HOXD9-201ENST00000249499 DISP2A7MBM2 1401 aa27.98■■■□□ 2.07
HOXD9-201ENST00000249499 PLCH1Q4KWH8 1693 aa27.98■■■□□ 2.07
HOXD9-201ENST00000249499 K7ELQ4 463 aaPredicted RBP27.98■■■□□ 2.07
HOXD9-201ENST00000249499 BTG4Q9NY30 223 aa27.98■■■□□ 2.07
HOXD9-201ENST00000249499 NUTM1Q86Y26 1132 aa27.97■■■□□ 2.07
HOXD9-201ENST00000249499 CIZ1Q9ULV3 898 aaPredicted RBP27.97■■■□□ 2.07
HOXD9-201ENST00000249499 TOGARAM1Q9Y4F4 1720 aa27.96■■■□□ 2.07
HOXD9-201ENST00000249499 GLRX3O76003 335 aaKnown RBP27.95■■■□□ 2.07
HOXD9-201ENST00000249499 DDIT3P35638 169 aa27.95■■■□□ 2.07
HOXD9-201ENST00000249499 IL27Q8NEV9 243 aa27.95■■■□□ 2.07
HOXD9-201ENST00000249499 RILPL2Q969X0 211 aa27.95■■■□□ 2.07
HOXD9-201ENST00000249499 GPATCH3Q96I76 525 aa27.95■■■□□ 2.07
HOXD9-201ENST00000249499 FRAT2O75474 233 aaPredicted RBP27.95■■■□□ 2.06
HOXD9-201ENST00000249499 DEKP35659 375 aaKnown RBP27.94■■■□□ 2.06
HOXD9-201ENST00000249499 NBPF26B4DH59 902 aa27.93■■■□□ 2.06
HOXD9-201ENST00000249499 G3BP1Q13283 466 aaKnown RBP eCLIP27.93■■■□□ 2.06
HOXD9-201ENST00000249499 NBPF14Q5TI25 921 aa27.93■■■□□ 2.06
HOXD9-201ENST00000249499 NBPF10Q6P3W6 841 aaKnown RBP27.93■■■□□ 2.06
HOXD9-201ENST00000249499 CNTROBQ8N137 903 aa27.93■■■□□ 2.06
HOXD9-201ENST00000249499 NBPF15Q8N660 670 aa27.93■■■□□ 2.06
HOXD9-201ENST00000249499 TMOD3Q9NYL9 352 aa27.93■■■□□ 2.06
HOXD9-201ENST00000249499 VSIG10Q8N0Z9 540 aa27.93■■■□□ 2.06
HOXD9-201ENST00000249499 TEX13AQ9BXU3 409 aaPredicted RBP27.93■■■□□ 2.06
HOXD9-201ENST00000249499 MCCP23508 829 aa27.92■■■□□ 2.06
HOXD9-201ENST00000249499 RABL6Q3YEC7 729 aaPredicted RBP27.92■■■□□ 2.06
HOXD9-201ENST00000249499 IL17RAQ96F46 866 aa27.92■■■□□ 2.06
HOXD9-201ENST00000249499 AFDNP55196 1824 aaKnown RBP27.92■■■□□ 2.06
HOXD9-201ENST00000249499 ANAPC15P60006 121 aa27.91■■■□□ 2.06
HOXD9-201ENST00000249499 ECHDC1Q9NTX5 307 aa27.91■■■□□ 2.06
HOXD9-201ENST00000249499 NUP188Q5SRE5 1749 aa27.9■■■□□ 2.06
HOXD9-201ENST00000249499 UNC5CLQ8IV45 518 aa27.9■■■□□ 2.06
HOXD9-201ENST00000249499 RBM42Q9BTD8 480 aaKnown RBP27.9■■■□□ 2.06
HOXD9-201ENST00000249499 PA2G4Q9UQ80 394 aaKnown RBP27.9■■■□□ 2.06
HOXD9-201ENST00000249499 IFIT2P09913 472 aaKnown RBP27.89■■■□□ 2.06
HOXD9-201ENST00000249499 COPRSQ9NQ92 184 aa27.89■■■□□ 2.06
HOXD9-201ENST00000249499 ST18O60284 1047 aa27.89■■■□□ 2.05
HOXD9-201ENST00000249499 CD2BP2O95400 341 aaKnown RBP27.89■■■□□ 2.05
HOXD9-201ENST00000249499 ADAMTS2O95450 1211 aa27.89■■■□□ 2.05
HOXD9-201ENST00000249499 PIP4K2AP48426 406 aaPredicted RBP27.88■■■□□ 2.05
HOXD9-201ENST00000249499 SPRYD3Q8NCJ5 442 aa27.88■■■□□ 2.05
HOXD9-201ENST00000249499 AK9Q5TCS8 1911 aa27.87■■■□□ 2.05
HOXD9-201ENST00000249499 SASH1O94885 1247 aa27.87■■■□□ 2.05
HOXD9-201ENST00000249499 CASP7P55210 303 aa27.87■■■□□ 2.05
HOXD9-201ENST00000249499 A0A087WZG4 1122 aa27.86■■■□□ 2.05
HOXD9-201ENST00000249499 H7C1W4 665 aa27.85■■■□□ 2.05
HOXD9-201ENST00000249499 PTCD1O75127 700 aaKnown RBP27.85■■■□□ 2.05
HOXD9-201ENST00000249499 CDCA7Q9BWT1 371 aaPredicted RBP27.85■■■□□ 2.05
HOXD9-201ENST00000249499 EPHA10Q5JZY3 1008 aa27.85■■■□□ 2.05
HOXD9-201ENST00000249499 UBE3BQ7Z3V4 1068 aa27.85■■■□□ 2.05
HOXD9-201ENST00000249499 AACSQ86V21 672 aa27.85■■■□□ 2.05
HOXD9-201ENST00000249499 WNK3Q9BYP7 1800 aa27.84■■■□□ 2.05
HOXD9-201ENST00000249499 A1BGP04217 495 aa27.84■■■□□ 2.05
HOXD9-201ENST00000249499 HSP90AA1P07900 732 aaKnown RBP27.84■■■□□ 2.05
HOXD9-201ENST00000249499 CCDC191Q8NCU4 936 aa27.84■■■□□ 2.05
HOXD9-201ENST00000249499 CWC25Q9NXE8 425 aaPredicted RBP27.84■■■□□ 2.05
HOXD9-201ENST00000249499 RFX5P48382 616 aaPredicted RBP27.83■■■□□ 2.05
HOXD9-201ENST00000249499 MEX3CQ5U5Q3 659 aaKnown RBP27.83■■■□□ 2.05
HOXD9-201ENST00000249499 ANO2Q9NQ90 1003 aa27.83■■■□□ 2.05
HOXD9-201ENST00000249499 SGSM2O43147 1006 aa27.83■■■□□ 2.04
HOXD9-201ENST00000249499 PIGBQ92521 554 aa27.83■■■□□ 2.04
HOXD9-201ENST00000249499 TTLL7Q6ZT98 887 aa27.82■■■□□ 2.04
HOXD9-201ENST00000249499 RGS17Q9UGC6 210 aaPredicted RBP27.82■■■□□ 2.04
HOXD9-201ENST00000249499 ATP5J2-PTCD1G3V325 749 aa27.81■■■□□ 2.04
HOXD9-201ENST00000249499 MCM2P49736 904 aa27.81■■■□□ 2.04
HOXD9-201ENST00000249499 EVI5LQ96CN4 794 aa27.81■■■□□ 2.04
HOXD9-201ENST00000249499 BCL9O00512 1426 aa27.81■■■□□ 2.04
HOXD9-201ENST00000249499 RUFY2Q8WXA3 655 aa27.81■■■□□ 2.04
HOXD9-201ENST00000249499 EAF2Q96CJ1 260 aaPredicted RBP27.81■■■□□ 2.04
HOXD9-201ENST00000249499 C8orf37Q96NL8 207 aa27.81■■■□□ 2.04
HOXD9-201ENST00000249499 THRAP3Q9Y2W1 955 aaKnown RBP27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms