RNA–Protein interactions for RNA: ENST00000246672.3

NR1D1-201, Transcript of nuclear receptor subfamily 1 group D member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1D1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1-201ENST00000246672 DNAJC2Q99543 621 aaKnown RBP14.8□□□□□ -0.04
NR1D1-201ENST00000246672 TULP2O00295 520 aa14.8□□□□□ -0.04
NR1D1-201ENST00000246672 WASLO00401 505 aaPredicted RBP14.8□□□□□ -0.04
NR1D1-201ENST00000246672 TTC6Q86TZ1 520 aa14.8□□□□□ -0.04
NR1D1-201ENST00000246672 LSG1Q9H089 658 aaKnown RBP14.8□□□□□ -0.04
NR1D1-201ENST00000246672 CALCOCO1Q9P1Z2 691 aa14.8□□□□□ -0.04
NR1D1-201ENST00000246672 STAG3Q9UJ98 1225 aa14.8□□□□□ -0.04
NR1D1-201ENST00000246672 VPS37CA5D8V6 355 aaPredicted RBP14.79□□□□□ -0.04
NR1D1-201ENST00000246672 ELF2Q15723 593 aa14.79□□□□□ -0.04
NR1D1-201ENST00000246672 TRERF1Q96PN7 1200 aa14.79□□□□□ -0.04
NR1D1-201ENST00000246672 EPB41L2O43491 1005 aaKnown RBP14.79□□□□□ -0.04
NR1D1-201ENST00000246672 CASTP20810 708 aaKnown RBP14.79□□□□□ -0.04
NR1D1-201ENST00000246672 SLC20A2Q08357 652 aa14.79□□□□□ -0.04
NR1D1-201ENST00000246672 CLIP2Q9UDT6 1046 aa14.79□□□□□ -0.04
NR1D1-201ENST00000246672 SPG7Q9UQ90 795 aa14.79□□□□□ -0.04
NR1D1-201ENST00000246672 FLIIQ13045 1269 aa14.79□□□□□ -0.04
NR1D1-201ENST00000246672 NUDT16Q96DE0 195 aaKnown RBP14.79□□□□□ -0.04
NR1D1-201ENST00000246672 STK31Q9BXU1 1019 aa14.79□□□□□ -0.04
NR1D1-201ENST00000246672 ARID5BQ14865 1188 aa14.78□□□□□ -0.04
NR1D1-201ENST00000246672 FAM173BQ6P4H8 233 aa14.78□□□□□ -0.04
NR1D1-201ENST00000246672 AOX1Q06278 1338 aa14.78□□□□□ -0.04
NR1D1-201ENST00000246672 PREX1Q8TCU6 1659 aa14.78□□□□□ -0.04
NR1D1-201ENST00000246672 NPHP1O15259 732 aa14.78□□□□□ -0.04
NR1D1-201ENST00000246672 HSP90AB2PQ58FF8 381 aa14.78□□□□□ -0.04
NR1D1-201ENST00000246672 CWC27Q6UX04 472 aaKnown RBP14.78□□□□□ -0.04
NR1D1-201ENST00000246672 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.78□□□□□ -0.04
NR1D1-201ENST00000246672 TNMDQ9H2S6 317 aa14.78□□□□□ -0.04
NR1D1-201ENST00000246672 ZNF446Q9NWS9 450 aa14.78□□□□□ -0.04
NR1D1-201ENST00000246672 HYPKQ9NX55 129 aa14.78□□□□□ -0.04
NR1D1-201ENST00000246672 DACT1Q9NYF0 836 aa14.78□□□□□ -0.04
NR1D1-201ENST00000246672 PI4K2BQ8TCG2 481 aa14.77□□□□□ -0.04
NR1D1-201ENST00000246672 PTPN14Q15678 1187 aa14.76□□□□□ -0.05
NR1D1-201ENST00000246672 FERMT3Q86UX7 667 aa14.76□□□□□ -0.05
NR1D1-201ENST00000246672 TDRD7Q8NHU6 1098 aaKnown RBP14.76□□□□□ -0.05
NR1D1-201ENST00000246672 DDX54Q8TDD1 881 aaKnown RBP14.76□□□□□ -0.05
NR1D1-201ENST00000246672 DLC1Q96QB1 1528 aa14.76□□□□□ -0.05
NR1D1-201ENST00000246672 ERBB3P21860 1342 aa14.76□□□□□ -0.05
NR1D1-201ENST00000246672 SURF6O75683 361 aaKnown RBP14.76□□□□□ -0.05
NR1D1-201ENST00000246672 MTHFSDQ2M296 383 aaKnown RBP14.76□□□□□ -0.05
NR1D1-201ENST00000246672 LRRC8AQ8IWT6 810 aa14.76□□□□□ -0.05
NR1D1-201ENST00000246672 KIF1BPQ96EK5 621 aa14.76□□□□□ -0.05
NR1D1-201ENST00000246672 ERO1AQ96HE7 468 aa14.76□□□□□ -0.05
NR1D1-201ENST00000246672 NRKQ7Z2Y5 1582 aa14.76□□□□□ -0.05
NR1D1-201ENST00000246672 SOS1Q07889 1333 aaPredicted RBP14.75□□□□□ -0.05
NR1D1-201ENST00000246672 ZNF165P49910 485 aa14.75□□□□□ -0.05
NR1D1-201ENST00000246672 HNRNPH2P55795 449 aaKnown RBP14.75□□□□□ -0.05
NR1D1-201ENST00000246672 ST3GAL1Q11201 340 aa14.75□□□□□ -0.05
NR1D1-201ENST00000246672 ADCK5Q3MIX3 580 aa14.75□□□□□ -0.05
NR1D1-201ENST00000246672 NYAP1Q6ZVC0 841 aa14.75□□□□□ -0.05
NR1D1-201ENST00000246672 NOL10Q9BSC4 688 aaKnown RBP14.75□□□□□ -0.05
NR1D1-201ENST00000246672 USP44Q9H0E7 712 aa14.75□□□□□ -0.05
NR1D1-201ENST00000246672 DNAJC25Q9H1X3 360 aa14.75□□□□□ -0.05
NR1D1-201ENST00000246672 SOX12O15370 315 aa14.75□□□□□ -0.05
NR1D1-201ENST00000246672 CYP2C19P33261 490 aa14.75□□□□□ -0.05
NR1D1-201ENST00000246672 KRT85P78386 507 aa14.75□□□□□ -0.05
NR1D1-201ENST00000246672 NECAB1Q8N987 351 aa14.75□□□□□ -0.05
NR1D1-201ENST00000246672 PDRG1Q9NUG6 133 aa14.75□□□□□ -0.05
NR1D1-201ENST00000246672 TRMT1Q9NXH9 659 aaKnown RBP14.75□□□□□ -0.05
NR1D1-201ENST00000246672 DIP2CQ9Y2E4 1556 aa14.75□□□□□ -0.05
NR1D1-201ENST00000246672 JAKMIP1Q96N16 626 aaKnown RBP14.74□□□□□ -0.05
NR1D1-201ENST00000246672 TRIM34Q9BYJ4 488 aa14.74□□□□□ -0.05
NR1D1-201ENST00000246672 CCDC61Q9Y6R9 512 aa14.74□□□□□ -0.05
NR1D1-201ENST00000246672 CCDC171Q6TFL3 1326 aa14.74□□□□□ -0.05
NR1D1-201ENST00000246672 UBTFL1P0CB47 393 aaPredicted RBP14.74□□□□□ -0.05
NR1D1-201ENST00000246672 SLFNL1Q499Z3 407 aa14.74□□□□□ -0.05
NR1D1-201ENST00000246672 TXNDC2Q86VQ3 553 aa14.74□□□□□ -0.05
NR1D1-201ENST00000246672 PTH1RQ03431 593 aa14.73□□□□□ -0.05
NR1D1-201ENST00000246672 CNTROBQ8N137 903 aa14.73□□□□□ -0.05
NR1D1-201ENST00000246672 RHPN1Q8TCX5 695 aa14.73□□□□□ -0.05
NR1D1-201ENST00000246672 GTF3C6Q969F1 213 aa14.73□□□□□ -0.05
NR1D1-201ENST00000246672 SLU7O95391 586 aaKnown RBP14.73□□□□□ -0.05
NR1D1-201ENST00000246672 SKILP12757 684 aa14.73□□□□□ -0.05
NR1D1-201ENST00000246672 ME3Q16798 604 aa14.73□□□□□ -0.05
NR1D1-201ENST00000246672 PRPF40BQ6NWY9 871 aaKnown RBP14.73□□□□□ -0.05
NR1D1-201ENST00000246672 PPP1R42Q7Z4L9 355 aa14.73□□□□□ -0.05
NR1D1-201ENST00000246672 SSH3Q8TE77 659 aa14.73□□□□□ -0.05
NR1D1-201ENST00000246672 ARHGEF10O15013 1369 aa14.73□□□□□ -0.05
NR1D1-201ENST00000246672 FAM193AP78312 1265 aa14.73□□□□□ -0.05
NR1D1-201ENST00000246672 CDC37L1Q7L3B6 337 aa14.73□□□□□ -0.05
NR1D1-201ENST00000246672 CHMP4AQ9BY43 222 aa14.73□□□□□ -0.05
NR1D1-201ENST00000246672 MON2Q7Z3U7 1717 aa14.73□□□□□ -0.05
NR1D1-201ENST00000246672 MAP3K19Q56UN5 1328 aa14.72□□□□□ -0.05
NR1D1-201ENST00000246672 VPS53Q5VIR6 699 aa14.72□□□□□ -0.05
NR1D1-201ENST00000246672 CCDC30Q5VVM6 783 aa14.72□□□□□ -0.05
NR1D1-201ENST00000246672 LARP1BQ659C4 914 aaKnown RBP14.72□□□□□ -0.05
NR1D1-201ENST00000246672 TFIP11Q9UBB9 837 aaKnown RBP14.72□□□□□ -0.05
NR1D1-201ENST00000246672 RIMBP3CA6NJZ7 1639 aa14.72□□□□□ -0.05
NR1D1-201ENST00000246672 RIMBP3BA6NNM3 1639 aa14.72□□□□□ -0.05
NR1D1-201ENST00000246672 RIMBP3Q9UFD9 1639 aa14.72□□□□□ -0.05
NR1D1-201ENST00000246672 XRN1Q8IZH2 1706 aaKnown RBP14.72□□□□□ -0.05
NR1D1-201ENST00000246672 C3P01024 1663 aa14.72□□□□□ -0.05
NR1D1-201ENST00000246672 GOLGA6L4A6NEF3 574 aa14.72□□□□□ -0.05
NR1D1-201ENST00000246672 NPM1P06748 294 aaKnown RBP eCLIP14.72□□□□□ -0.05
NR1D1-201ENST00000246672 ELP1O95163 1332 aa14.71□□□□□ -0.05
NR1D1-201ENST00000246672 RAB11FIP3O75154 756 aa14.71□□□□□ -0.05
NR1D1-201ENST00000246672 BMS1Q14692 1282 aaKnown RBP14.71□□□□□ -0.05
NR1D1-201ENST00000246672 ERCC6LQ2NKX8 1250 aa14.71□□□□□ -0.05
NR1D1-201ENST00000246672 RBM43Q6ZSC3 357 aaKnown RBP14.71□□□□□ -0.05
NR1D1-201ENST00000246672 CREBRFQ8IUR6 639 aa14.71□□□□□ -0.05
NR1D1-201ENST00000246672 ZSCAN31Q96LW9 406 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms