RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 IL1RAPL2Q9NP60 686 aa13.68□□□□□ -0.22
CCND1-201ENST00000227507 HTATSF1O43719 755 aaKnown RBP13.67□□□□□ -0.22
CCND1-201ENST00000227507 GNAI2P04899 355 aa13.67□□□□□ -0.22
CCND1-201ENST00000227507 MCM2P49736 904 aa13.67□□□□□ -0.22
CCND1-201ENST00000227507 MTHFSDQ2M296 383 aaKnown RBP13.66□□□□□ -0.22
CCND1-201ENST00000227507 CKAP2LQ8IYA6 745 aa13.66□□□□□ -0.22
CCND1-201ENST00000227507 TEX13AQ9BXU3 409 aaPredicted RBP13.66□□□□□ -0.22
CCND1-201ENST00000227507 ATP7BP35670 1465 aa13.66□□□□□ -0.22
CCND1-201ENST00000227507 VPS37DQ86XT2 251 aa13.66□□□□□ -0.22
CCND1-201ENST00000227507 CCDC112Q8NEF3 446 aa13.66□□□□□ -0.22
CCND1-201ENST00000227507 BCCIPQ9P287 314 aaKnown RBP eCLIP13.66□□□□□ -0.22
CCND1-201ENST00000227507 DBF4Q9UBU7 674 aaPredicted RBP13.66□□□□□ -0.22
CCND1-201ENST00000227507 LRRFIP1Q32MZ4 808 aaKnown RBP13.66□□□□□ -0.22
CCND1-201ENST00000227507 CLEC17AQ6ZS10 378 aa13.66□□□□□ -0.22
CCND1-201ENST00000227507 CERS3Q8IU89 383 aa13.66□□□□□ -0.22
CCND1-201ENST00000227507 ZNF710Q8N1W2 664 aa13.66□□□□□ -0.22
CCND1-201ENST00000227507 PALD1Q9ULE6 856 aa13.66□□□□□ -0.22
CCND1-201ENST00000227507 ATP6V1DQ9Y5K8 247 aa13.66□□□□□ -0.22
CCND1-201ENST00000227507 APPP05067 770 aa13.65□□□□□ -0.22
CCND1-201ENST00000227507 SURF6O75683 361 aaKnown RBP13.65□□□□□ -0.22
CCND1-201ENST00000227507 PTGS1P23219 599 aa13.65□□□□□ -0.22
CCND1-201ENST00000227507 CDCA7Q9BWT1 371 aaPredicted RBP13.65□□□□□ -0.22
CCND1-201ENST00000227507 PYCARDQ9ULZ3 195 aa13.65□□□□□ -0.22
CCND1-201ENST00000227507 SETD1BQ9UPS6 1966 aaKnown RBP13.65□□□□□ -0.22
CCND1-201ENST00000227507 IL13P35225 146 aa13.65□□□□□ -0.22
CCND1-201ENST00000227507 RPAP2Q8IXW5 612 aaPredicted RBP13.65□□□□□ -0.22
CCND1-201ENST00000227507 PLEKHF1Q96S99 279 aa13.65□□□□□ -0.22
CCND1-201ENST00000227507 KDM4AO75164 1064 aa13.64□□□□□ -0.23
CCND1-201ENST00000227507 BRD1O95696 1058 aa13.64□□□□□ -0.23
CCND1-201ENST00000227507 CYP2E1P05181 493 aaPredicted RBP13.64□□□□□ -0.23
CCND1-201ENST00000227507 TNNT1P13805 278 aa13.64□□□□□ -0.23
CCND1-201ENST00000227507 RIMS1Q86UR5 1692 aaKnown RBP13.64□□□□□ -0.23
CCND1-201ENST00000227507 LARP1Q6PKG0 1096 aaKnown RBP13.64□□□□□ -0.23
CCND1-201ENST00000227507 CCDC186Q7Z3E2 898 aa13.64□□□□□ -0.23
CCND1-201ENST00000227507 CCDC192P0DO97 292 aa13.63□□□□□ -0.23
CCND1-201ENST00000227507 ZNF652Q9Y2D9 606 aa13.63□□□□□ -0.23
CCND1-201ENST00000227507 USP6P35125 1406 aa13.63□□□□□ -0.23
CCND1-201ENST00000227507 SNRPA1P09661 255 aaKnown RBP13.63□□□□□ -0.23
CCND1-201ENST00000227507 MX1P20591 662 aa13.63□□□□□ -0.23
CCND1-201ENST00000227507 PDE1AP54750 535 aa13.63□□□□□ -0.23
CCND1-201ENST00000227507 ADGRL3Q9HAR2 1447 aa13.63□□□□□ -0.23
CCND1-201ENST00000227507 ANKARQ7Z5J8 1434 aa13.63□□□□□ -0.23
CCND1-201ENST00000227507 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.63□□□□□ -0.23
CCND1-201ENST00000227507 CLASRPQ8N2M8 674 aaKnown RBP13.63□□□□□ -0.23
CCND1-201ENST00000227507 NEUROD6Q96NK8 337 aa13.63□□□□□ -0.23
CCND1-201ENST00000227507 HYPKQ9NX55 129 aa13.63□□□□□ -0.23
CCND1-201ENST00000227507 CCDC83Q8IWF9 413 aa13.63□□□□□ -0.23
CCND1-201ENST00000227507 ANKRD44Q8N8A2 993 aa13.63□□□□□ -0.23
CCND1-201ENST00000227507 DCAF5Q96JK2 942 aa13.63□□□□□ -0.23
CCND1-201ENST00000227507 TAF3Q5VWG9 929 aa13.62□□□□□ -0.23
CCND1-201ENST00000227507 NUTM1Q86Y26 1132 aa13.62□□□□□ -0.23
CCND1-201ENST00000227507 FRMPD1Q5SYB0 1578 aa13.62□□□□□ -0.23
CCND1-201ENST00000227507 CPA1P15085 419 aa13.62□□□□□ -0.23
CCND1-201ENST00000227507 NAA30Q147X3 362 aaPredicted RBP13.62□□□□□ -0.23
CCND1-201ENST00000227507 UVSSAQ2YD98 709 aa13.62□□□□□ -0.23
CCND1-201ENST00000227507 CEP85Q6P2H3 762 aa13.62□□□□□ -0.23
CCND1-201ENST00000227507 BICD2Q8TD16 824 aa13.62□□□□□ -0.23
CCND1-201ENST00000227507 PCDH11XQ9BZA7 1347 aa13.62□□□□□ -0.23
CCND1-201ENST00000227507 PCDH11YQ9BZA8 1340 aa13.62□□□□□ -0.23
CCND1-201ENST00000227507 TNNT3P45378 269 aaPredicted RBP13.62□□□□□ -0.23
CCND1-201ENST00000227507 ARHGAP45Q92619 1136 aa13.62□□□□□ -0.23
CCND1-201ENST00000227507 ACSBG1Q96GR2 724 aa13.62□□□□□ -0.23
CCND1-201ENST00000227507 MAP3K5Q99683 1374 aa13.62□□□□□ -0.23
CCND1-201ENST00000227507 PIK3C2BO00750 1634 aa13.61□□□□□ -0.23
CCND1-201ENST00000227507 FOSBP53539 338 aa13.61□□□□□ -0.23
CCND1-201ENST00000227507 DNM1Q05193 864 aaKnown RBP13.61□□□□□ -0.23
CCND1-201ENST00000227507 SMARCC1Q92922 1105 aaPredicted RBP13.61□□□□□ -0.23
CCND1-201ENST00000227507 TRMT1Q9NXH9 659 aaKnown RBP13.61□□□□□ -0.23
CCND1-201ENST00000227507 ZPR1O75312 459 aa13.61□□□□□ -0.23
CCND1-201ENST00000227507 FILIP1Q7Z7B0 1213 aa13.61□□□□□ -0.23
CCND1-201ENST00000227507 GOLGA6L19H0YKK7 550 aa13.61□□□□□ -0.23
CCND1-201ENST00000227507 BRINP3Q76B58 766 aa13.61□□□□□ -0.23
CCND1-201ENST00000227507 ESYT1Q9BSJ8 1104 aa13.61□□□□□ -0.23
CCND1-201ENST00000227507 LRRCC1Q9C099 1032 aa13.61□□□□□ -0.23
CCND1-201ENST00000227507 RICTORQ6R327 1708 aa13.61□□□□□ -0.23
CCND1-201ENST00000227507 LRMPQ12912 555 aa13.6□□□□□ -0.23
CCND1-201ENST00000227507 STX6O43752 255 aa13.6□□□□□ -0.23
CCND1-201ENST00000227507 CEBPZQ03701 1054 aaKnown RBP13.6□□□□□ -0.23
CCND1-201ENST00000227507 LUZP1Q86V48 1076 aa13.6□□□□□ -0.23
CCND1-201ENST00000227507 MADDQ8WXG6 1647 aa13.6□□□□□ -0.23
CCND1-201ENST00000227507 IRX3P78415 501 aaPredicted RBP13.6□□□□□ -0.23
CCND1-201ENST00000227507 BICDL1Q6ZP65 573 aa13.6□□□□□ -0.23
CCND1-201ENST00000227507 TFIP11Q9UBB9 837 aaKnown RBP13.6□□□□□ -0.23
CCND1-201ENST00000227507 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.6□□□□□ -0.23
CCND1-201ENST00000227507 UBE2HP62256 183 aa13.6□□□□□ -0.23
CCND1-201ENST00000227507 SLC39A6Q13433 755 aa13.6□□□□□ -0.23
CCND1-201ENST00000227507 NBPF6Q5VWK0 638 aa13.6□□□□□ -0.23
CCND1-201ENST00000227507 CWC27Q6UX04 472 aaKnown RBP13.6□□□□□ -0.23
CCND1-201ENST00000227507 NBPF4Q96M43 638 aa13.6□□□□□ -0.23
CCND1-201ENST00000227507 PREX1Q8TCU6 1659 aa13.59□□□□□ -0.23
CCND1-201ENST00000227507 ZRSR1Q15695 479 aaKnown RBP13.59□□□□□ -0.23
CCND1-201ENST00000227507 HSP90AB3PQ58FF7 597 aa13.59□□□□□ -0.23
CCND1-201ENST00000227507 FAM173BQ6P4H8 233 aa13.59□□□□□ -0.23
CCND1-201ENST00000227507 NFATC2IPQ8NCF5 419 aa13.59□□□□□ -0.23
CCND1-201ENST00000227507 BECN2A8MW95 431 aa13.59□□□□□ -0.23
CCND1-201ENST00000227507 FLIIQ13045 1269 aa13.59□□□□□ -0.23
CCND1-201ENST00000227507 RUFY2Q8WXA3 655 aa13.59□□□□□ -0.23
CCND1-201ENST00000227507 TNMDQ9H2S6 317 aa13.59□□□□□ -0.23
CCND1-201ENST00000227507 USP21Q9UK80 565 aa13.59□□□□□ -0.23
CCND1-201ENST00000227507 ERC1Q8IUD2 1116 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms