RNA–Protein interactions for RNA: ENST00000220478.7

SCG3-201, Transcript of secretogranin III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG3, Length 3,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-201ENST00000220478 CHRM1P11229 460 aaPredicted RBP9.44□□□□□ -0.9
SCG3-201ENST00000220478 SYT1P21579 422 aa9.44□□□□□ -0.9
SCG3-201ENST00000220478 NFE2L2Q16236 605 aa9.44□□□□□ -0.9
SCG3-201ENST00000220478 CCDC186Q7Z3E2 898 aa9.44□□□□□ -0.9
SCG3-201ENST00000220478 CACTINQ8WUQ7 758 aaKnown RBP9.44□□□□□ -0.9
SCG3-201ENST00000220478 MCCP23508 829 aa9.44□□□□□ -0.9
SCG3-201ENST00000220478 LUZP1Q86V48 1076 aa9.44□□□□□ -0.9
SCG3-201ENST00000220478 KRT222Q8N1A0 295 aa9.44□□□□□ -0.9
SCG3-201ENST00000220478 TIGD1Q96MW7 591 aa9.44□□□□□ -0.9
SCG3-201ENST00000220478 FEZ2Q9UHY8 353 aaPredicted RBP9.44□□□□□ -0.9
SCG3-201ENST00000220478 ZNF215Q9UL58 517 aaPredicted RBP9.44□□□□□ -0.9
SCG3-201ENST00000220478 FHOD1Q9Y613 1164 aa9.44□□□□□ -0.9
SCG3-201ENST00000220478 FAM208AQ9UK61 1670 aaKnown RBP9.43□□□□□ -0.9
SCG3-201ENST00000220478 F13A1P00488 732 aa9.43□□□□□ -0.9
SCG3-201ENST00000220478 RUFY3Q7L099 469 aa9.43□□□□□ -0.9
SCG3-201ENST00000220478 RPAP2Q8IXW5 612 aaPredicted RBP9.43□□□□□ -0.9
SCG3-201ENST00000220478 NRKQ7Z2Y5 1582 aa9.43□□□□□ -0.9
SCG3-201ENST00000220478 FAM83GA6ND36 823 aa9.43□□□□□ -0.9
SCG3-201ENST00000220478 TNNT1P13805 278 aa9.43□□□□□ -0.9
SCG3-201ENST00000220478 RBM43Q6ZSC3 357 aaKnown RBP9.43□□□□□ -0.9
SCG3-201ENST00000220478 TPM3P06753 285 aa9.43□□□□□ -0.9
SCG3-201ENST00000220478 HSPA4P34932 840 aa9.43□□□□□ -0.9
SCG3-201ENST00000220478 ARID5BQ14865 1188 aa9.43□□□□□ -0.9
SCG3-201ENST00000220478 KCNG1Q9UIX4 513 aa9.43□□□□□ -0.9
SCG3-201ENST00000220478 PTPRCP08575 1304 aa9.42□□□□□ -0.9
SCG3-201ENST00000220478 EVC2Q86UK5 1308 aa9.42□□□□□ -0.9
SCG3-201ENST00000220478 ITSN1Q15811 1721 aa9.42□□□□□ -0.9
SCG3-201ENST00000220478 TPD52L2O43399 206 aaKnown RBP9.42□□□□□ -0.9
SCG3-201ENST00000220478 H2AFXP16104 143 aaPredicted RBP9.42□□□□□ -0.9
SCG3-201ENST00000220478 HNRNPH2P55795 449 aaKnown RBP9.42□□□□□ -0.9
SCG3-201ENST00000220478 ZNF397Q8NF99 534 aaPredicted RBP9.42□□□□□ -0.9
SCG3-201ENST00000220478 API5Q9BZZ5 524 aaKnown RBP9.42□□□□□ -0.9
SCG3-201ENST00000220478 SLC52A1Q9NWF4 448 aa9.42□□□□□ -0.9
SCG3-201ENST00000220478 POLKQ9UBT6 870 aa9.42□□□□□ -0.9
SCG3-201ENST00000220478 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.42□□□□□ -0.9
SCG3-201ENST00000220478 V9GYY5 206 aaPredicted RBP9.42□□□□□ -0.9
SCG3-201ENST00000220478 RGPD1P0DJD0 1748 aa9.42□□□□□ -0.9
SCG3-201ENST00000220478 DNM1Q05193 864 aaKnown RBP9.42□□□□□ -0.9
SCG3-201ENST00000220478 COL9A3Q14050 684 aaPredicted RBP9.42□□□□□ -0.9
SCG3-201ENST00000220478 SLFNL1Q499Z3 407 aa9.42□□□□□ -0.9
SCG3-201ENST00000220478 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.42□□□□□ -0.9
SCG3-201ENST00000220478 MTMR6Q9Y217 621 aa9.42□□□□□ -0.9
SCG3-201ENST00000220478 YTHDC2Q9H6S0 1430 aaKnown RBP9.41□□□□□ -0.9
SCG3-201ENST00000220478 ERICH4A6NGS2 130 aa9.41□□□□□ -0.9
SCG3-201ENST00000220478 STX6O43752 255 aa9.41□□□□□ -0.9
SCG3-201ENST00000220478 ZNF75DP51815 510 aa9.41□□□□□ -0.9
SCG3-201ENST00000220478 CHAF1AQ13111 956 aaPredicted RBP9.41□□□□□ -0.9
SCG3-201ENST00000220478 FAM200AQ8TCP9 573 aa9.41□□□□□ -0.9
SCG3-201ENST00000220478 AK7Q96M32 723 aa9.41□□□□□ -0.9
SCG3-201ENST00000220478 UBXN6Q9BZV1 441 aa9.41□□□□□ -0.9
SCG3-201ENST00000220478 PAXBP1Q9Y5B6 917 aa9.41□□□□□ -0.9
SCG3-201ENST00000220478 RAD50Q92878 1312 aa9.41□□□□□ -0.9
SCG3-201ENST00000220478 LIG1P18858 919 aa9.41□□□□□ -0.9
SCG3-201ENST00000220478 ELF2Q15723 593 aa9.41□□□□□ -0.9
SCG3-201ENST00000220478 RASEFQ8IZ41 740 aa9.41□□□□□ -0.9
SCG3-201ENST00000220478 LARP6Q9BRS8 491 aaKnown RBP9.41□□□□□ -0.9
SCG3-201ENST00000220478 CBX8Q9HC52 389 aa9.41□□□□□ -0.9
SCG3-201ENST00000220478 ZNF219Q9P2Y4 722 aaPredicted RBP9.41□□□□□ -0.9
SCG3-201ENST00000220478 FIBPO43427 364 aa9.41□□□□□ -0.9
SCG3-201ENST00000220478 PLA2G4AP47712 749 aa9.41□□□□□ -0.9
SCG3-201ENST00000220478 RAD51AP2Q09MP3 1159 aa9.41□□□□□ -0.9
SCG3-201ENST00000220478 SPTY2D1Q68D10 685 aaPredicted RBP9.41□□□□□ -0.9
SCG3-201ENST00000220478 CASC1Q6TDU7 716 aa9.41□□□□□ -0.9
SCG3-201ENST00000220478 ATG3Q9NT62 314 aa9.41□□□□□ -0.9
SCG3-201ENST00000220478 ADCY9O60503 1353 aa9.4□□□□□ -0.9
SCG3-201ENST00000220478 HMOX1P09601 288 aa9.4□□□□□ -0.9
SCG3-201ENST00000220478 IL13P35225 146 aa9.4□□□□□ -0.9
SCG3-201ENST00000220478 GNAI1P63096 354 aa9.4□□□□□ -0.9
SCG3-201ENST00000220478 ZNF662Q6ZS27 426 aa9.4□□□□□ -0.9
SCG3-201ENST00000220478 MICAL1Q8TDZ2 1067 aa9.4□□□□□ -0.9
SCG3-201ENST00000220478 TTC21AQ8NDW8 1320 aa9.4□□□□□ -0.9
SCG3-201ENST00000220478 TYRO3Q06418 890 aa9.4□□□□□ -0.9
SCG3-201ENST00000220478 TTC6Q86TZ1 520 aa9.4□□□□□ -0.9
SCG3-201ENST00000220478 PPP1R1BQ9UD71 204 aaPredicted RBP9.4□□□□□ -0.9
SCG3-201ENST00000220478 TTC21BQ7Z4L5 1316 aa9.4□□□□□ -0.9
SCG3-201ENST00000220478 ZC3H4Q9UPT8 1303 aaKnown RBP9.4□□□□□ -0.9
SCG3-201ENST00000220478 CCDC66A2RUB6 948 aa9.39□□□□□ -0.91
SCG3-201ENST00000220478 FANCGO15287 622 aa9.39□□□□□ -0.91
SCG3-201ENST00000220478 AK2P54819 239 aa9.39□□□□□ -0.91
SCG3-201ENST00000220478 CCZ1BP86790 482 aa9.39□□□□□ -0.91
SCG3-201ENST00000220478 CCZ1P86791 482 aaPredicted RBP9.39□□□□□ -0.91
SCG3-201ENST00000220478 CCDC93Q567U6 631 aa9.39□□□□□ -0.91
SCG3-201ENST00000220478 EFCAB2Q5VUJ9 269 aa9.39□□□□□ -0.91
SCG3-201ENST00000220478 TDRD7Q8NHU6 1098 aaKnown RBP9.39□□□□□ -0.91
SCG3-201ENST00000220478 KCND1Q9NSA2 647 aa9.39□□□□□ -0.91
SCG3-201ENST00000220478 SUGT1Q9Y2Z0 365 aa9.39□□□□□ -0.91
SCG3-201ENST00000220478 SNX14Q9Y5W7 946 aa9.39□□□□□ -0.91
SCG3-201ENST00000220478 RIMS1Q86UR5 1692 aaKnown RBP9.39□□□□□ -0.91
SCG3-201ENST00000220478 TRIM6-TRIM34B2RNG4 842 aa9.39□□□□□ -0.91
SCG3-201ENST00000220478 KIF3BO15066 747 aa9.39□□□□□ -0.91
SCG3-201ENST00000220478 POLA2Q14181 598 aa9.39□□□□□ -0.91
SCG3-201ENST00000220478 DCTN1Q14203 1278 aa9.39□□□□□ -0.91
SCG3-201ENST00000220478 CCDC112Q8NEF3 446 aa9.39□□□□□ -0.91
SCG3-201ENST00000220478 TRIM34Q9BYJ4 488 aa9.39□□□□□ -0.91
SCG3-201ENST00000220478 KIAA1522Q9P206 1035 aaPredicted RBP9.39□□□□□ -0.91
SCG3-201ENST00000220478 ZRANB2O95218 330 aaKnown RBP eCLIP9.39□□□□□ -0.91
SCG3-201ENST00000220478 FOSBP53539 338 aa9.39□□□□□ -0.91
SCG3-201ENST00000220478 CEP135Q66GS9 1140 aa9.39□□□□□ -0.91
SCG3-201ENST00000220478 STAP2Q9UGK3 403 aa9.39□□□□□ -0.91
SCG3-201ENST00000220478 EXOC6BQ9Y2D4 811 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms