RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 NFIXQ14938 502 aa15.71■□□□□ 0.11
SNU13-201ENST00000215956 COL15A1P39059 1388 aa15.7■□□□□ 0.1
SNU13-201ENST00000215956 TTLL6Q8N841 843 aa15.7■□□□□ 0.1
SNU13-201ENST00000215956 MRC1P22897 1456 aa15.69■□□□□ 0.1
SNU13-201ENST00000215956 GNAI1P63096 354 aa15.69■□□□□ 0.1
SNU13-201ENST00000215956 GAS2L2Q8NHY3 880 aa15.69■□□□□ 0.1
SNU13-201ENST00000215956 NARFQ9UHQ1 456 aa15.69■□□□□ 0.1
SNU13-201ENST00000215956 FER1L6Q2WGJ9 1857 aa15.69■□□□□ 0.1
SNU13-201ENST00000215956 ANKRD31Q8N7Z5 1873 aa15.69■□□□□ 0.1
SNU13-201ENST00000215956 ZNF428Q96B54 188 aa15.68■□□□□ 0.1
SNU13-201ENST00000215956 CARMIL3Q8ND23 1372 aa15.68■□□□□ 0.1
SNU13-201ENST00000215956 NFKBIEO00221 500 aa15.68■□□□□ 0.1
SNU13-201ENST00000215956 SERPINB2P05120 415 aa15.68■□□□□ 0.1
SNU13-201ENST00000215956 CYP19A1P11511 503 aaPredicted RBP15.68■□□□□ 0.1
SNU13-201ENST00000215956 C2CD5Q86YS7 1000 aa15.68■□□□□ 0.1
SNU13-201ENST00000215956 PHACTR3Q96KR7 559 aa15.68■□□□□ 0.1
SNU13-201ENST00000215956 SLC52A2Q9HAB3 445 aa15.68■□□□□ 0.1
SNU13-201ENST00000215956 IFT57Q9NWB7 429 aa15.68■□□□□ 0.1
SNU13-201ENST00000215956 BCL2L12Q9HB09 334 aa15.67■□□□□ 0.1
SNU13-201ENST00000215956 ZBTB1Q9Y2K1 713 aa15.67■□□□□ 0.1
SNU13-201ENST00000215956 FANCIQ9NVI1 1328 aa15.67■□□□□ 0.1
SNU13-201ENST00000215956 COL11A2P13942 1736 aaPredicted RBP15.66■□□□□ 0.1
SNU13-201ENST00000215956 UBR2Q8IWV8 1755 aa15.66■□□□□ 0.1
SNU13-201ENST00000215956 POTECB2RU33 542 aa15.66■□□□□ 0.1
SNU13-201ENST00000215956 HTATSF1O43719 755 aaKnown RBP15.66■□□□□ 0.1
SNU13-201ENST00000215956 MS4A1P11836 297 aa15.66■□□□□ 0.1
SNU13-201ENST00000215956 AKAP4Q5JQC9 854 aa15.66■□□□□ 0.1
SNU13-201ENST00000215956 CACNA1SQ13698 1873 aa15.65■□□□□ 0.1
SNU13-201ENST00000215956 H0YIN7 160 aa15.65■□□□□ 0.1
SNU13-201ENST00000215956 SLC39A6Q13433 755 aa15.65■□□□□ 0.1
SNU13-201ENST00000215956 CANXP27824 592 aaKnown RBP15.65■□□□□ 0.1
SNU13-201ENST00000215956 PDE3AQ14432 1141 aa15.65■□□□□ 0.1
SNU13-201ENST00000215956 DPY19L2Q6NUT2 758 aa15.65■□□□□ 0.1
SNU13-201ENST00000215956 RTF1Q92541 710 aaKnown RBP15.65■□□□□ 0.1
SNU13-201ENST00000215956 CCDC136Q96JN2 1154 aa15.65■□□□□ 0.1
SNU13-201ENST00000215956 SCN7AQ01118 1682 aa15.64■□□□□ 0.09
SNU13-201ENST00000215956 RARSP54136 660 aaKnown RBP15.64■□□□□ 0.09
SNU13-201ENST00000215956 LGR6Q9HBX8 967 aa15.64■□□□□ 0.09
SNU13-201ENST00000215956 CFAP44Q96MT7 982 aa15.63■□□□□ 0.09
SNU13-201ENST00000215956 CREBZFQ9NS37 354 aa15.63■□□□□ 0.09
SNU13-201ENST00000215956 AAMPQ13685 434 aa15.62■□□□□ 0.09
SNU13-201ENST00000215956 ERFEQ4G0M1 354 aa15.62■□□□□ 0.09
SNU13-201ENST00000215956 BICDL1Q6ZP65 573 aa15.62■□□□□ 0.09
SNU13-201ENST00000215956 MKRN1Q9UHC7 482 aaKnown RBP15.62■□□□□ 0.09
SNU13-201ENST00000215956 RNMTO43148 476 aaKnown RBP15.61■□□□□ 0.09
SNU13-201ENST00000215956 ALDH1L2Q3SY69 923 aa15.61■□□□□ 0.09
SNU13-201ENST00000215956 CHADLQ6NUI6 762 aa15.61■□□□□ 0.09
SNU13-201ENST00000215956 VSIG10Q8N0Z9 540 aa15.61■□□□□ 0.09
SNU13-201ENST00000215956 ARFGEF2Q9Y6D5 1785 aa15.61■□□□□ 0.09
SNU13-201ENST00000215956 C21orf2O43822 256 aa15.61■□□□□ 0.09
SNU13-201ENST00000215956 ZNF853P0CG23 659 aa15.61■□□□□ 0.09
SNU13-201ENST00000215956 EXOSC9Q06265 439 aaKnown RBP15.61■□□□□ 0.09
SNU13-201ENST00000215956 ZNF622Q969S3 477 aaKnown RBP eCLIP15.61■□□□□ 0.09
SNU13-201ENST00000215956 SLX4Q8IY92 1834 aa15.6■□□□□ 0.09
SNU13-201ENST00000215956 PLIN1O60240 522 aa15.6■□□□□ 0.09
SNU13-201ENST00000215956 EXOC6Q8TAG9 804 aa15.6■□□□□ 0.09
SNU13-201ENST00000215956 TSR2Q969E8 191 aaKnown RBP15.6■□□□□ 0.09
SNU13-201ENST00000215956 ZNF219Q9P2Y4 722 aaPredicted RBP15.6■□□□□ 0.09
SNU13-201ENST00000215956 PDZRN3Q9UPQ7 1066 aa15.6■□□□□ 0.09
SNU13-201ENST00000215956 SCN4AP35499 1836 aa15.6■□□□□ 0.09
SNU13-201ENST00000215956 KIF16BQ96L93 1317 aa15.59■□□□□ 0.09
SNU13-201ENST00000215956 BRIP1Q9BX63 1249 aa15.59■□□□□ 0.09
SNU13-201ENST00000215956 TAOK3Q9H2K8 898 aa15.59■□□□□ 0.09
SNU13-201ENST00000215956 LAS1LQ9Y4W2 734 aaKnown RBP15.59■□□□□ 0.09
SNU13-201ENST00000215956 LTBP3Q9NS15 1303 aa15.58■□□□□ 0.09
SNU13-201ENST00000215956 IPO8O15397 1037 aaKnown RBP15.58■□□□□ 0.09
SNU13-201ENST00000215956 BCAR3O75815 825 aa15.58■□□□□ 0.09
SNU13-201ENST00000215956 POTEIP0CG38 1075 aa15.58■□□□□ 0.09
SNU13-201ENST00000215956 POTEJP0CG39 1038 aa15.58■□□□□ 0.09
SNU13-201ENST00000215956 PDE6BP35913 854 aa15.58■□□□□ 0.09
SNU13-201ENST00000215956 EIF5P55010 431 aaKnown RBP15.58■□□□□ 0.09
SNU13-201ENST00000215956 TBC1D9BQ66K14 1250 aa15.58■□□□□ 0.09
SNU13-201ENST00000215956 B4GALNT3Q6L9W6 998 aa15.58■□□□□ 0.09
SNU13-201ENST00000215956 CRBNQ96SW2 442 aa15.58■□□□□ 0.09
SNU13-201ENST00000215956 CNTNAP1P78357 1384 aa15.58■□□□□ 0.08
SNU13-201ENST00000215956 A0A087WZG4 1122 aa15.57■□□□□ 0.08
SNU13-201ENST00000215956 FOXN1O15353 648 aa15.57■□□□□ 0.08
SNU13-201ENST00000215956 STARD3NLO95772 234 aa15.57■□□□□ 0.08
SNU13-201ENST00000215956 MTHFSDQ2M296 383 aaKnown RBP15.57■□□□□ 0.08
SNU13-201ENST00000215956 PRR5LQ6MZQ0 368 aa15.57■□□□□ 0.08
SNU13-201ENST00000215956 BABAM1Q9NWV8 329 aa15.57■□□□□ 0.08
SNU13-201ENST00000215956 GNAT3A8MTJ3 354 aa15.57■□□□□ 0.08
SNU13-201ENST00000215956 DDNO94850 711 aaPredicted RBP15.57■□□□□ 0.08
SNU13-201ENST00000215956 ZKSCAN2Q63HK3 967 aa15.57■□□□□ 0.08
SNU13-201ENST00000215956 SMC4Q9NTJ3 1288 aa15.57■□□□□ 0.08
SNU13-201ENST00000215956 BCORQ6W2J9 1755 aa15.56■□□□□ 0.08
SNU13-201ENST00000215956 BRPF1P55201 1214 aaPredicted RBP15.56■□□□□ 0.08
SNU13-201ENST00000215956 CCDC24Q8N4L8 307 aa15.56■□□□□ 0.08
SNU13-201ENST00000215956 MBIPQ9NS73 344 aa15.56■□□□□ 0.08
SNU13-201ENST00000215956 SIPA1L3O60292 1781 aaPredicted RBP15.56■□□□□ 0.08
SNU13-201ENST00000215956 TTC5Q8N0Z6 440 aa15.55■□□□□ 0.08
SNU13-201ENST00000215956 PRDM10Q9NQV6 1147 aa15.55■□□□□ 0.08
SNU13-201ENST00000215956 PASKQ96RG2 1323 aa15.55■□□□□ 0.08
SNU13-201ENST00000215956 IQCA1LA6NCM1 817 aa15.54■□□□□ 0.08
SNU13-201ENST00000215956 CHL1O00533 1208 aa15.54■□□□□ 0.08
SNU13-201ENST00000215956 FRAT1Q92837 279 aaPredicted RBP15.54■□□□□ 0.08
SNU13-201ENST00000215956 CNKSR1Q969H4 720 aa15.54■□□□□ 0.08
SNU13-201ENST00000215956 ZNF330Q9Y3S2 320 aaPredicted RBP15.54■□□□□ 0.08
SNU13-201ENST00000215956 PRPF40BQ6NWY9 871 aaKnown RBP15.54■□□□□ 0.08
SNU13-201ENST00000215956 LDHDQ86WU2 507 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 240.5 ms