RNA–Protein interactions for RNA: ENST00000204005.13

LTBP4-201, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP4, Length 5,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-201ENST00000204005 DCAF5Q96JK2 942 aa22.4■■□□□ 1.18
LTBP4-201ENST00000204005 NUP62CLQ9H1M0 184 aa22.4■■□□□ 1.18
LTBP4-201ENST00000204005 DDX11Q96FC9 970 aa22.39■■□□□ 1.18
LTBP4-201ENST00000204005 LIMCH1Q9UPQ0 1083 aa22.39■■□□□ 1.18
LTBP4-201ENST00000204005 KRT24Q2M2I5 525 aa22.39■■□□□ 1.17
LTBP4-201ENST00000204005 NFATC2IPQ8NCF5 419 aa22.39■■□□□ 1.17
LTBP4-201ENST00000204005 PLEKHG3A1L390 1219 aa22.39■■□□□ 1.17
LTBP4-201ENST00000204005 TTC37Q6PGP7 1564 aa22.38■■□□□ 1.17
LTBP4-201ENST00000204005 CCDC70Q6NSX1 233 aa22.38■■□□□ 1.17
LTBP4-201ENST00000204005 KDM2BQ8NHM5 1336 aa22.38■■□□□ 1.17
LTBP4-201ENST00000204005 SMC2O95347 1197 aa22.38■■□□□ 1.17
LTBP4-201ENST00000204005 ANKIB1Q9P2G1 1089 aa22.38■■□□□ 1.17
LTBP4-201ENST00000204005 GOLIM4O00461 696 aa22.38■■□□□ 1.17
LTBP4-201ENST00000204005 TSHZ3Q63HK5 1081 aa22.38■■□□□ 1.17
LTBP4-201ENST00000204005 ZNF287Q9HBT7 754 aa22.38■■□□□ 1.17
LTBP4-201ENST00000204005 PDE1AP54750 535 aa22.37■■□□□ 1.17
LTBP4-201ENST00000204005 MLH3Q9UHC1 1453 aa22.37■■□□□ 1.17
LTBP4-201ENST00000204005 KLHL40Q2TBA0 621 aa22.37■■□□□ 1.17
LTBP4-201ENST00000204005 SNX21Q969T3 373 aa22.37■■□□□ 1.17
LTBP4-201ENST00000204005 TTF1Q15361 905 aaPredicted RBP22.37■■□□□ 1.17
LTBP4-201ENST00000204005 JARID2Q92833 1246 aaPredicted RBP22.37■■□□□ 1.17
LTBP4-201ENST00000204005 ZBTB40Q9NUA8 1239 aa22.37■■□□□ 1.17
LTBP4-201ENST00000204005 BLMP54132 1417 aaPredicted RBP22.36■■□□□ 1.17
LTBP4-201ENST00000204005 ZNF213O14771 459 aa22.36■■□□□ 1.17
LTBP4-201ENST00000204005 RNMTO43148 476 aaKnown RBP22.36■■□□□ 1.17
LTBP4-201ENST00000204005 SDSP20132 328 aa22.36■■□□□ 1.17
LTBP4-201ENST00000204005 ZSCAN29Q8IWY8 852 aaPredicted RBP22.36■■□□□ 1.17
LTBP4-201ENST00000204005 BABAM1Q9NWV8 329 aa22.36■■□□□ 1.17
LTBP4-201ENST00000204005 KDM5DQ9BY66 1539 aa22.36■■□□□ 1.17
LTBP4-201ENST00000204005 MINDY4BA8MYZ0 360 aa22.36■■□□□ 1.17
LTBP4-201ENST00000204005 PIP4K2AP48426 406 aaPredicted RBP22.36■■□□□ 1.17
LTBP4-201ENST00000204005 PLXNC1O60486 1568 aa22.35■■□□□ 1.17
LTBP4-201ENST00000204005 PREX2Q70Z35 1606 aa22.35■■□□□ 1.17
LTBP4-201ENST00000204005 KDM6BO15054 1643 aa22.35■■□□□ 1.17
LTBP4-201ENST00000204005 DZIP1Q86YF9 867 aaKnown RBP22.35■■□□□ 1.17
LTBP4-201ENST00000204005 ORAI2Q96SN7 254 aa22.35■■□□□ 1.17
LTBP4-201ENST00000204005 DDB1Q16531 1140 aa22.35■■□□□ 1.17
LTBP4-201ENST00000204005 CCDC183Q5T5S1 534 aa22.35■■□□□ 1.17
LTBP4-201ENST00000204005 UBAP1LF5GYI3 381 aa22.34■■□□□ 1.17
LTBP4-201ENST00000204005 RPGRQ92834 1020 aaKnown RBP22.34■■□□□ 1.17
LTBP4-201ENST00000204005 USP5P45974 858 aa22.34■■□□□ 1.17
LTBP4-201ENST00000204005 FILIP1LQ4L180 1135 aa22.34■■□□□ 1.17
LTBP4-201ENST00000204005 FERMT3Q86UX7 667 aa22.34■■□□□ 1.17
LTBP4-201ENST00000204005 PDILTQ8N807 584 aa22.34■■□□□ 1.17
LTBP4-201ENST00000204005 DCTPP1Q9H773 170 aa22.34■■□□□ 1.17
LTBP4-201ENST00000204005 PDE4CQ08493 712 aa22.34■■□□□ 1.17
LTBP4-201ENST00000204005 SMARCC1Q92922 1105 aaPredicted RBP22.34■■□□□ 1.17
LTBP4-201ENST00000204005 AK7Q96M32 723 aa22.34■■□□□ 1.17
LTBP4-201ENST00000204005 CHD1O14646 1710 aa22.34■■□□□ 1.17
LTBP4-201ENST00000204005 CCDC196A0A1B0GTZ2 297 aa22.34■■□□□ 1.17
LTBP4-201ENST00000204005 LTKP29376 864 aa22.34■■□□□ 1.17
LTBP4-201ENST00000204005 SEC24BO95487 1268 aa22.33■■□□□ 1.17
LTBP4-201ENST00000204005 MAP3K11Q16584 847 aa22.33■■□□□ 1.17
LTBP4-201ENST00000204005 SMC5Q8IY18 1101 aa22.33■■□□□ 1.17
LTBP4-201ENST00000204005 BCL11BQ9C0K0 894 aaPredicted RBP22.33■■□□□ 1.17
LTBP4-201ENST00000204005 RNF41Q9H4P4 317 aaPredicted RBP22.33■■□□□ 1.17
LTBP4-201ENST00000204005 SNRKQ9NRH2 765 aa22.33■■□□□ 1.17
LTBP4-201ENST00000204005 CEP85Q6P2H3 762 aa22.33■■□□□ 1.16
LTBP4-201ENST00000204005 LMBR1LQ6UX01 489 aa22.33■■□□□ 1.16
LTBP4-201ENST00000204005 CCP110O43303 1012 aa22.32■■□□□ 1.16
LTBP4-201ENST00000204005 DHX8Q14562 1220 aaKnown RBP22.32■■□□□ 1.16
LTBP4-201ENST00000204005 HMG20BQ9P0W2 317 aa22.32■■□□□ 1.16
LTBP4-201ENST00000204005 TRIM35Q9UPQ4 493 aa22.32■■□□□ 1.16
LTBP4-201ENST00000204005 XRCC6P12956 609 aaKnown RBP eCLIP22.31■■□□□ 1.166e-6■□□□□ 9.5
LTBP4-201ENST00000204005 EPS15P42566 896 aa22.31■■□□□ 1.16
LTBP4-201ENST00000204005 TMOD2Q9NZR1 351 aa22.31■■□□□ 1.16
LTBP4-201ENST00000204005 DACH1Q9UI36 760 aa22.31■■□□□ 1.16
LTBP4-201ENST00000204005 POLR3DP05423 398 aaPredicted RBP22.31■■□□□ 1.16
LTBP4-201ENST00000204005 CCDC152Q4G0S7 254 aa22.31■■□□□ 1.16
LTBP4-201ENST00000204005 MAGI2Q86UL8 1455 aa22.31■■□□□ 1.16
LTBP4-201ENST00000204005 UQCRFS1P1P0C7P4 283 aa22.31■■□□□ 1.16
LTBP4-201ENST00000204005 SCAND2PQ9GZW5 306 aaPredicted RBP22.31■■□□□ 1.16
LTBP4-201ENST00000204005 ZCCHC11Q5TAX3 1644 aaKnown RBP22.31■■□□□ 1.16
LTBP4-201ENST00000204005 PCDH11XQ9BZA7 1347 aa22.3■■□□□ 1.16
LTBP4-201ENST00000204005 PCDH11YQ9BZA8 1340 aa22.3■■□□□ 1.16
LTBP4-201ENST00000204005 DDX46Q7L014 1031 aaKnown RBP22.3■■□□□ 1.16
LTBP4-201ENST00000204005 MKNK2Q9HBH9 465 aa22.3■■□□□ 1.16
LTBP4-201ENST00000204005 IL15P40933 162 aaPredicted RBP22.3■■□□□ 1.16
LTBP4-201ENST00000204005 CCAR1Q8IX12 1150 aaKnown RBP22.3■■□□□ 1.16
LTBP4-201ENST00000204005 CHL1O00533 1208 aa22.3■■□□□ 1.16
LTBP4-201ENST00000204005 ATP6V1AP38606 617 aa22.3■■□□□ 1.16
LTBP4-201ENST00000204005 IQCA1Q86XH1 822 aa22.3■■□□□ 1.16
LTBP4-201ENST00000204005 CCDC112Q8NEF3 446 aa22.3■■□□□ 1.16
LTBP4-201ENST00000204005 DDX21Q9NR30 783 aaKnown RBP eCLIP22.29■■□□□ 1.16
LTBP4-201ENST00000204005 KRT18P05783 430 aaKnown RBP22.29■■□□□ 1.16
LTBP4-201ENST00000204005 MAGEC2Q9UBF1 373 aaPredicted RBP22.29■■□□□ 1.16
LTBP4-201ENST00000204005 HOXB7P09629 217 aa22.29■■□□□ 1.16
LTBP4-201ENST00000204005 OFD1O75665 1012 aa22.28■■□□□ 1.16
LTBP4-201ENST00000204005 RFC4P35249 363 aa22.28■■□□□ 1.16
LTBP4-201ENST00000204005 ACSBG1Q96GR2 724 aa22.28■■□□□ 1.16
LTBP4-201ENST00000204005 CEP57L1Q8IYX8 460 aa22.28■■□□□ 1.16
LTBP4-201ENST00000204005 C8orf76Q96K31 380 aa22.28■■□□□ 1.16
LTBP4-201ENST00000204005 SLF2Q8IX21 1173 aa22.27■■□□□ 1.16
LTBP4-201ENST00000204005 MYOM2P54296 1465 aa22.27■■□□□ 1.16
LTBP4-201ENST00000204005 KDM5AP29375 1690 aaKnown RBP22.27■■□□□ 1.16
LTBP4-201ENST00000204005 STIM1Q13586 685 aa22.27■■□□□ 1.16
LTBP4-201ENST00000204005 CTCFLQ8NI51 663 aaPredicted RBP22.27■■□□□ 1.16
LTBP4-201ENST00000204005 CEP131Q9UPN4 1083 aa22.27■■□□□ 1.16
LTBP4-201ENST00000204005 ZFYP08048 801 aaPredicted RBP22.26■■□□□ 1.15
LTBP4-201ENST00000204005 ATP2B3Q16720 1220 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms