RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 APBA3O96018 575 aa13.6□□□□□ -0.23
DNMT3B-201ENST00000201963 PIP4K2AP48426 406 aaPredicted RBP13.6□□□□□ -0.23
DNMT3B-201ENST00000201963 ZNF772Q68DY9 489 aaPredicted RBP13.6□□□□□ -0.23
DNMT3B-201ENST00000201963 KIF18AQ8NI77 898 aa13.6□□□□□ -0.23
DNMT3B-201ENST00000201963 IP6K1Q92551 441 aa13.6□□□□□ -0.23
DNMT3B-201ENST00000201963 TFIP11Q9UBB9 837 aaKnown RBP13.6□□□□□ -0.23
DNMT3B-201ENST00000201963 PIK3C2GO75747 1445 aa13.6□□□□□ -0.23
DNMT3B-201ENST00000201963 FRMPD1Q5SYB0 1578 aa13.6□□□□□ -0.23
DNMT3B-201ENST00000201963 CLTCL1P53675 1640 aa13.59□□□□□ -0.23
DNMT3B-201ENST00000201963 SRGAP3O43295 1099 aa13.59□□□□□ -0.23
DNMT3B-201ENST00000201963 STX6O43752 255 aa13.59□□□□□ -0.23
DNMT3B-201ENST00000201963 LEKR1Q6ZMV7 388 aa13.59□□□□□ -0.23
DNMT3B-201ENST00000201963 C17orf53Q8N3J3 647 aaPredicted RBP13.59□□□□□ -0.23
DNMT3B-201ENST00000201963 SIRT1Q96EB6 747 aa13.59□□□□□ -0.23
DNMT3B-201ENST00000201963 ZNF219Q9P2Y4 722 aaPredicted RBP13.59□□□□□ -0.23
DNMT3B-201ENST00000201963 POLR3GO15318 223 aaPredicted RBP13.59□□□□□ -0.23
DNMT3B-201ENST00000201963 UBE2HP62256 183 aa13.59□□□□□ -0.23
DNMT3B-201ENST00000201963 STK38Q15208 465 aa13.59□□□□□ -0.23
DNMT3B-201ENST00000201963 AMOTQ4VCS5 1084 aa13.59□□□□□ -0.23
DNMT3B-201ENST00000201963 RICTORQ6R327 1708 aa13.58□□□□□ -0.23
DNMT3B-201ENST00000201963 ASXL1Q8IXJ9 1541 aa13.58□□□□□ -0.24
DNMT3B-201ENST00000201963 KDM4AO75164 1064 aa13.58□□□□□ -0.24
DNMT3B-201ENST00000201963 CEP57L1Q8IYX8 460 aa13.58□□□□□ -0.24
DNMT3B-201ENST00000201963 DDX11Q96FC9 970 aa13.58□□□□□ -0.24
DNMT3B-201ENST00000201963 ZSCAN31Q96LW9 406 aaPredicted RBP13.58□□□□□ -0.24
DNMT3B-201ENST00000201963 AK7Q96M32 723 aa13.58□□□□□ -0.24
DNMT3B-201ENST00000201963 CCDC85AQ96PX6 553 aaPredicted RBP13.58□□□□□ -0.24
DNMT3B-201ENST00000201963 CNPY2Q9Y2B0 182 aa13.58□□□□□ -0.24
DNMT3B-201ENST00000201963 ADGRB3O60242 1522 aa13.58□□□□□ -0.24
DNMT3B-201ENST00000201963 ZNF445P59923 1031 aa13.58□□□□□ -0.24
DNMT3B-201ENST00000201963 CCDC186Q7Z3E2 898 aa13.58□□□□□ -0.24
DNMT3B-201ENST00000201963 LIMCH1Q9UPQ0 1083 aa13.58□□□□□ -0.24
DNMT3B-201ENST00000201963 KIF1BO60333 1816 aa13.58□□□□□ -0.24
DNMT3B-201ENST00000201963 SERPINC1P01008 464 aa13.58□□□□□ -0.24
DNMT3B-201ENST00000201963 TRIM29Q14134 588 aa13.58□□□□□ -0.24
DNMT3B-201ENST00000201963 PRPF40BQ6NWY9 871 aaKnown RBP13.57□□□□□ -0.24
DNMT3B-201ENST00000201963 TMCO3Q6UWJ1 677 aa13.57□□□□□ -0.24
DNMT3B-201ENST00000201963 CALCOCO1Q9P1Z2 691 aa13.57□□□□□ -0.24
DNMT3B-201ENST00000201963 TRIM37O94972 964 aa13.57□□□□□ -0.24
DNMT3B-201ENST00000201963 GTF2F1P35269 517 aaKnown RBP eCLIP13.57□□□□□ -0.241e-7■■■■■ 30.9
DNMT3B-201ENST00000201963 ZNF165P49910 485 aa13.57□□□□□ -0.24
DNMT3B-201ENST00000201963 NBPF6Q5VWK0 638 aa13.57□□□□□ -0.24
DNMT3B-201ENST00000201963 OLFM4Q6UX06 510 aa13.57□□□□□ -0.24
DNMT3B-201ENST00000201963 NBPF4Q96M43 638 aa13.57□□□□□ -0.24
DNMT3B-201ENST00000201963 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.57□□□□□ -0.24
DNMT3B-201ENST00000201963 V9GYY5 206 aaPredicted RBP13.57□□□□□ -0.24
DNMT3B-201ENST00000201963 GTPBP4Q9BZE4 634 aaKnown RBP13.57□□□□□ -0.24
DNMT3B-201ENST00000201963 ACBD3Q9H3P7 528 aa13.57□□□□□ -0.24
DNMT3B-201ENST00000201963 TFCP2L1Q9NZI6 479 aa13.57□□□□□ -0.24
DNMT3B-201ENST00000201963 DDX58O95786 925 aaKnown RBP13.56□□□□□ -0.24
DNMT3B-201ENST00000201963 TERF1P54274 439 aa13.56□□□□□ -0.24
DNMT3B-201ENST00000201963 BLMP54132 1417 aaPredicted RBP13.56□□□□□ -0.24
DNMT3B-201ENST00000201963 ANXA1P04083 346 aa13.56□□□□□ -0.24
DNMT3B-201ENST00000201963 NFATC2IPQ8NCF5 419 aa13.56□□□□□ -0.24
DNMT3B-201ENST00000201963 NEUROD6Q96NK8 337 aa13.56□□□□□ -0.24
DNMT3B-201ENST00000201963 FLT4P35916 1363 aa13.56□□□□□ -0.24
DNMT3B-201ENST00000201963 IQGAP3Q86VI3 1631 aa13.56□□□□□ -0.24
DNMT3B-201ENST00000201963 IPO7O95373 1038 aaKnown RBP13.56□□□□□ -0.24
DNMT3B-201ENST00000201963 KIF6Q6ZMV9 814 aa13.56□□□□□ -0.24
DNMT3B-201ENST00000201963 PPP1R9BQ96SB3 815 aa13.56□□□□□ -0.24
DNMT3B-201ENST00000201963 SPATA31A3Q5VYP0 1347 aa13.56□□□□□ -0.24
DNMT3B-201ENST00000201963 KCNQ4P56696 695 aa13.56□□□□□ -0.24
DNMT3B-201ENST00000201963 SEPT12Q8IYM1 358 aa13.56□□□□□ -0.24
DNMT3B-201ENST00000201963 SCAND2PQ9GZW5 306 aaPredicted RBP13.56□□□□□ -0.24
DNMT3B-201ENST00000201963 PIK3C2BO00750 1634 aa13.55□□□□□ -0.24
DNMT3B-201ENST00000201963 STARD3NLO95772 234 aa13.55□□□□□ -0.24
DNMT3B-201ENST00000201963 APPP05067 770 aa13.55□□□□□ -0.24
DNMT3B-201ENST00000201963 ANKRD1Q15327 319 aa13.55□□□□□ -0.24
DNMT3B-201ENST00000201963 CCDC70Q6NSX1 233 aa13.55□□□□□ -0.24
DNMT3B-201ENST00000201963 ZNF396Q96N95 335 aaPredicted RBP13.55□□□□□ -0.24
DNMT3B-201ENST00000201963 CCP110O43303 1012 aa13.55□□□□□ -0.24
DNMT3B-201ENST00000201963 SFPQP23246 707 aaKnown RBP eCLIP13.55□□□□□ -0.24
DNMT3B-201ENST00000201963 ATP6V1AP38606 617 aa13.55□□□□□ -0.24
DNMT3B-201ENST00000201963 LMBRD1Q9NUN5 540 aa13.55□□□□□ -0.24
DNMT3B-201ENST00000201963 DNAJC2Q99543 621 aaKnown RBP13.55□□□□□ -0.24
DNMT3B-201ENST00000201963 MBIPQ9NS73 344 aa13.55□□□□□ -0.24
DNMT3B-201ENST00000201963 HOOK1Q9UJC3 728 aaKnown RBP13.55□□□□□ -0.24
DNMT3B-201ENST00000201963 CFAP45Q9UL16 551 aa13.55□□□□□ -0.24
DNMT3B-201ENST00000201963 ZPR1O75312 459 aa13.54□□□□□ -0.24
DNMT3B-201ENST00000201963 URI1O94763 535 aaPredicted RBP13.54□□□□□ -0.24
DNMT3B-201ENST00000201963 POLR3AO14802 1390 aaPredicted RBP13.54□□□□□ -0.24
DNMT3B-201ENST00000201963 RAB11FIP3O75154 756 aa13.54□□□□□ -0.24
DNMT3B-201ENST00000201963 KRT222Q8N1A0 295 aa13.54□□□□□ -0.24
DNMT3B-201ENST00000201963 MEIS3Q99687 375 aa13.54□□□□□ -0.24
DNMT3B-201ENST00000201963 TMEM63CQ9P1W3 806 aa13.54□□□□□ -0.24
DNMT3B-201ENST00000201963 ATP2B1P20020 1258 aa13.54□□□□□ -0.24
DNMT3B-201ENST00000201963 GJB2P29033 226 aa13.54□□□□□ -0.24
DNMT3B-201ENST00000201963 TRDNQ13061 729 aa13.54□□□□□ -0.24
DNMT3B-201ENST00000201963 ERBB4Q15303 1308 aa13.54□□□□□ -0.24
DNMT3B-201ENST00000201963 ADAMTS13Q76LX8 1427 aa13.54□□□□□ -0.24
DNMT3B-201ENST00000201963 PLEKHM2Q8IWE5 1019 aa13.54□□□□□ -0.24
DNMT3B-201ENST00000201963 USP26Q9BXU7 913 aa13.54□□□□□ -0.24
DNMT3B-201ENST00000201963 SIL1Q9H173 461 aa13.54□□□□□ -0.24
DNMT3B-201ENST00000201963 E9PCH4 1651 aa13.54□□□□□ -0.24
DNMT3B-201ENST00000201963 FBXO41Q8TF61 875 aa13.53□□□□□ -0.24
DNMT3B-201ENST00000201963 IL16Q14005 1332 aa13.53□□□□□ -0.24
DNMT3B-201ENST00000201963 ZSCAN22P10073 491 aaPredicted RBP13.53□□□□□ -0.24
DNMT3B-201ENST00000201963 PDE4CQ08493 712 aa13.53□□□□□ -0.24
DNMT3B-201ENST00000201963 CEP135Q66GS9 1140 aa13.53□□□□□ -0.24
DNMT3B-201ENST00000201963 RALYLQ86SE5 291 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms