RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 HSP90B1P14625 803 aaKnown RBP19.96■□□□□ 0.79
CTDP1-201ENST00000075430 MYO3AQ8NEV4 1616 aa19.96■□□□□ 0.79
CTDP1-201ENST00000075430 ERICH4A6NGS2 130 aa19.96■□□□□ 0.79
CTDP1-201ENST00000075430 ZSCAN20P17040 1043 aaPredicted RBP19.96■□□□□ 0.79
CTDP1-201ENST00000075430 NUP62CLQ9H1M0 184 aa19.96■□□□□ 0.79
CTDP1-201ENST00000075430 DNAJC25Q9H1X3 360 aa19.96■□□□□ 0.79
CTDP1-201ENST00000075430 CDC37L1Q7L3B6 337 aa19.96■□□□□ 0.79
CTDP1-201ENST00000075430 FMNL2Q96PY5 1086 aa19.96■□□□□ 0.79
CTDP1-201ENST00000075430 ATP6V1DQ9Y5K8 247 aa19.96■□□□□ 0.79
CTDP1-201ENST00000075430 SOS1Q07889 1333 aaPredicted RBP19.95■□□□□ 0.78
CTDP1-201ENST00000075430 PI4KAP2A4QPH2 592 aa19.95■□□□□ 0.78
CTDP1-201ENST00000075430 GOLGA6L6A8MZA4 724 aa19.95■□□□□ 0.78
CTDP1-201ENST00000075430 RAB11FIP3O75154 756 aa19.95■□□□□ 0.78
CTDP1-201ENST00000075430 HSPA4P34932 840 aa19.95■□□□□ 0.78
CTDP1-201ENST00000075430 ARID5BQ14865 1188 aa19.95■□□□□ 0.78
CTDP1-201ENST00000075430 PI4KAP1Q8N8J0 262 aa19.95■□□□□ 0.78
CTDP1-201ENST00000075430 TNNT1P13805 278 aa19.95■□□□□ 0.78
CTDP1-201ENST00000075430 PRIMPOLQ96LW4 560 aa19.95■□□□□ 0.78
CTDP1-201ENST00000075430 BOLA2Q9H3K6 86 aa19.95■□□□□ 0.78
CTDP1-201ENST00000075430 C9orf78Q9NZ63 289 aaPredicted RBP19.95■□□□□ 0.78
CTDP1-201ENST00000075430 IFIT2P09913 472 aaKnown RBP19.94■□□□□ 0.78
CTDP1-201ENST00000075430 CYP46A1Q9Y6A2 500 aa19.94■□□□□ 0.78
CTDP1-201ENST00000075430 TTC6Q86TZ1 520 aa19.94■□□□□ 0.78
CTDP1-201ENST00000075430 EDC3Q96F86 508 aaKnown RBP19.94■□□□□ 0.78
CTDP1-201ENST00000075430 FAM227BQ96M60 508 aa19.94■□□□□ 0.78
CTDP1-201ENST00000075430 GUCY1B3Q02153 619 aa19.93■□□□□ 0.78
CTDP1-201ENST00000075430 ME3Q16798 604 aa19.93■□□□□ 0.78
CTDP1-201ENST00000075430 NEURL4Q96JN8 1562 aa19.93■□□□□ 0.78
CTDP1-201ENST00000075430 MAP3K11Q16584 847 aa19.93■□□□□ 0.78
CTDP1-201ENST00000075430 KLHDC4Q8TBB5 520 aa19.93■□□□□ 0.78
CTDP1-201ENST00000075430 ZBTB22O15209 634 aa19.93■□□□□ 0.78
CTDP1-201ENST00000075430 SGSM2O43147 1006 aa19.93■□□□□ 0.78
CTDP1-201ENST00000075430 SPATA32Q96LK8 384 aa19.92■□□□□ 0.78
CTDP1-201ENST00000075430 ZKSCAN1P17029 563 aaPredicted RBP19.92■□□□□ 0.78
CTDP1-201ENST00000075430 TYRO3Q06418 890 aa19.92■□□□□ 0.78
CTDP1-201ENST00000075430 AACSQ86V21 672 aa19.92■□□□□ 0.78
CTDP1-201ENST00000075430 RPAP1Q9BWH6 1393 aaPredicted RBP19.92■□□□□ 0.78
CTDP1-201ENST00000075430 ESCO1Q5FWF5 840 aa19.92■□□□□ 0.78
CTDP1-201ENST00000075430 GORABQ5T7V8 394 aa19.92■□□□□ 0.78
CTDP1-201ENST00000075430 OSBPL3Q9H4L5 887 aa19.92■□□□□ 0.78
CTDP1-201ENST00000075430 PPP6R1Q9UPN7 881 aa19.92■□□□□ 0.78
CTDP1-201ENST00000075430 MTMR6Q9Y217 621 aa19.92■□□□□ 0.78
CTDP1-201ENST00000075430 ANAPC15P60006 121 aa19.91■□□□□ 0.78
CTDP1-201ENST00000075430 KIAA1524Q8TCG1 905 aa19.91■□□□□ 0.78
CTDP1-201ENST00000075430 CPS1P31327 1500 aa19.91■□□□□ 0.78
CTDP1-201ENST00000075430 KCNQ3O43525 872 aa19.91■□□□□ 0.78
CTDP1-201ENST00000075430 PSME1Q06323 249 aa19.91■□□□□ 0.78
CTDP1-201ENST00000075430 KRT85P78386 507 aa19.9■□□□□ 0.78
CTDP1-201ENST00000075430 CLASRPQ8N2M8 674 aaKnown RBP19.9■□□□□ 0.78
CTDP1-201ENST00000075430 TAF6LQ9Y6J9 622 aa19.9■□□□□ 0.78
CTDP1-201ENST00000075430 KCNA6P17658 529 aa19.9■□□□□ 0.78
CTDP1-201ENST00000075430 UVSSAQ2YD98 709 aa19.9■□□□□ 0.78
CTDP1-201ENST00000075430 CHPF2Q9P2E5 772 aa19.9■□□□□ 0.78
CTDP1-201ENST00000075430 H3BQV1 296 aa19.89■□□□□ 0.78
CTDP1-201ENST00000075430 CHGBP05060 677 aa19.89■□□□□ 0.78
CTDP1-201ENST00000075430 IFFO2Q5TF58 517 aa19.89■□□□□ 0.78
CTDP1-201ENST00000075430 RGS12O14924 1447 aa19.89■□□□□ 0.78
CTDP1-201ENST00000075430 KNDC1Q76NI1 1749 aa19.89■□□□□ 0.78
CTDP1-201ENST00000075430 MAP2P11137 1827 aaKnown RBP19.89■□□□□ 0.77
CTDP1-201ENST00000075430 TMEM131LA2VDJ0 1609 aa19.89■□□□□ 0.77
CTDP1-201ENST00000075430 DMTNQ08495 405 aa19.89■□□□□ 0.77
CTDP1-201ENST00000075430 ZNF165P49910 485 aa19.89■□□□□ 0.77
CTDP1-201ENST00000075430 CWF19L2Q2TBE0 894 aaKnown RBP19.89■□□□□ 0.77
CTDP1-201ENST00000075430 FSD1Q9BTV5 496 aa19.89■□□□□ 0.77
CTDP1-201ENST00000075430 LARP1Q6PKG0 1096 aaKnown RBP19.88■□□□□ 0.77
CTDP1-201ENST00000075430 FTOQ9C0B1 505 aaKnown RBP eCLIP19.88■□□□□ 0.77
CTDP1-201ENST00000075430 LSG1Q9H089 658 aaKnown RBP19.88■□□□□ 0.77
CTDP1-201ENST00000075430 CBX8Q9HC52 389 aa19.88■□□□□ 0.77
CTDP1-201ENST00000075430 CLIP2Q9UDT6 1046 aa19.88■□□□□ 0.77
CTDP1-201ENST00000075430 TPCN1Q9ULQ1 816 aa19.88■□□□□ 0.77
CTDP1-201ENST00000075430 RAD50Q92878 1312 aa19.88■□□□□ 0.77
CTDP1-201ENST00000075430 GOLGA6L19H0YKK7 550 aa19.88■□□□□ 0.77
CTDP1-201ENST00000075430 JAK2O60674 1132 aa19.88■□□□□ 0.77
CTDP1-201ENST00000075430 CCDC112Q8NEF3 446 aa19.88■□□□□ 0.77
CTDP1-201ENST00000075430 TMEM2Q9UHN6 1383 aa19.88■□□□□ 0.77
CTDP1-201ENST00000075430 GNAT3A8MTJ3 354 aa19.88■□□□□ 0.77
CTDP1-201ENST00000075430 BECN2A8MW95 431 aa19.88■□□□□ 0.77
CTDP1-201ENST00000075430 ISM2Q6H9L7 571 aa19.88■□□□□ 0.77
CTDP1-201ENST00000075430 RBM8AQ9Y5S9 174 aaKnown RBP19.88■□□□□ 0.77
CTDP1-201ENST00000075430 TEFQ10587 303 aa19.87■□□□□ 0.77
CTDP1-201ENST00000075430 KIF1BPQ96EK5 621 aa19.87■□□□□ 0.77
CTDP1-201ENST00000075430 PIP4K2AP48426 406 aaPredicted RBP19.87■□□□□ 0.77
CTDP1-201ENST00000075430 HYPKQ9NX55 129 aa19.87■□□□□ 0.77
CTDP1-201ENST00000075430 USP16Q9Y5T5 823 aa19.87■□□□□ 0.77
CTDP1-201ENST00000075430 PREX1Q8TCU6 1659 aa19.87■□□□□ 0.77
CTDP1-201ENST00000075430 LETM1O95202 739 aaPredicted RBP19.86■□□□□ 0.77
CTDP1-201ENST00000075430 NR1I2O75469 434 aa19.86■□□□□ 0.77
CTDP1-201ENST00000075430 MPRIPQ6WCQ1 1025 aa19.86■□□□□ 0.77
CTDP1-201ENST00000075430 FAM200AQ8TCP9 573 aa19.86■□□□□ 0.77
CTDP1-201ENST00000075430 LRRC59Q96AG4 307 aaKnown RBP19.86■□□□□ 0.77
CTDP1-201ENST00000075430 IL17REQ8NFR9 667 aa19.85■□□□□ 0.77
CTDP1-201ENST00000075430 ATP7BP35670 1465 aa19.85■□□□□ 0.77
CTDP1-201ENST00000075430 PI4K2BQ8TCG2 481 aa19.85■□□□□ 0.77
CTDP1-201ENST00000075430 VGLL3A8MV65 326 aa19.85■□□□□ 0.77
CTDP1-201ENST00000075430 RAB11FIP4Q86YS3 637 aa19.85■□□□□ 0.77
CTDP1-201ENST00000075430 PTPN21Q16825 1174 aa19.84■□□□□ 0.77
CTDP1-201ENST00000075430 THEMISQ8N1K5 641 aaPredicted RBP19.84■□□□□ 0.77
CTDP1-201ENST00000075430 LGR6Q9HBX8 967 aa19.84■□□□□ 0.77
CTDP1-201ENST00000075430 MRVI1Q9Y6F6 885 aa19.84■□□□□ 0.77
CTDP1-201ENST00000075430 STK11IPQ8N1F8 1099 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 166.7 ms