RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 RalylQ8BTF8 293 aa11.66□□□□□ -0.54
Ubr1-201ENSMUST00000028728 Sytl4Q9R0Q1 673 aa11.66□□□□□ -0.54
Ubr1-201ENSMUST00000028728 Magi1Q6RHR9 1471 aa11.66□□□□□ -0.54
Ubr1-201ENSMUST00000028728 Setdb1O88974 1307 aa11.66□□□□□ -0.54
Ubr1-201ENSMUST00000028728 Sycp2lA0A0M3U1B0 842 aa11.66□□□□□ -0.54
Ubr1-201ENSMUST00000028728 Pnpla2Q8BJ56 486 aa11.66□□□□□ -0.54
Ubr1-201ENSMUST00000028728 Slx4Q6P1D7 1565 aa11.66□□□□□ -0.54
Ubr1-201ENSMUST00000028728 Klhl30Q8C3F7 581 aa11.66□□□□□ -0.54
Ubr1-201ENSMUST00000028728 Calml4Q91WQ9 153 aa11.66□□□□□ -0.54
Ubr1-201ENSMUST00000028728 FanclQ9CR14 375 aa11.66□□□□□ -0.54
Ubr1-201ENSMUST00000028728 Nap1l5Q9JJF0 156 aa11.66□□□□□ -0.54
Ubr1-201ENSMUST00000028728 3425401B19RikD3Z1D3 1412 aa11.66□□□□□ -0.54
Ubr1-201ENSMUST00000028728 Naip6Q9JIB6 1403 aa11.65□□□□□ -0.54
Ubr1-201ENSMUST00000028728 Opa1P58281 960 aa11.65□□□□□ -0.54
Ubr1-201ENSMUST00000028728 Ankrd26Q811D2 1581 aa11.65□□□□□ -0.54
Ubr1-201ENSMUST00000028728 Iffo1Q8BXL9 562 aa11.65□□□□□ -0.54
Ubr1-201ENSMUST00000028728 Tshz3Q8CGV9 1081 aa11.65□□□□□ -0.54
Ubr1-201ENSMUST00000028728 Atp1a4Q9WV27 1032 aa11.65□□□□□ -0.54
Ubr1-201ENSMUST00000028728 U2af2P26369 475 aaKnown RBP11.65□□□□□ -0.54
Ubr1-201ENSMUST00000028728 Map3k13Q1HKZ5 959 aa11.65□□□□□ -0.54
Ubr1-201ENSMUST00000028728 Ccdc148Q6P5U8 527 aa11.65□□□□□ -0.54
Ubr1-201ENSMUST00000028728 Tmem67Q8BR76 992 aa11.65□□□□□ -0.54
Ubr1-201ENSMUST00000028728 Vps37cQ8R105 352 aa11.65□□□□□ -0.54
Ubr1-201ENSMUST00000028728 Slc12a5Q91V14 1138 aa11.65□□□□□ -0.54
Ubr1-201ENSMUST00000028728 Sbno1Q689Z5 1390 aa11.65□□□□□ -0.54
Ubr1-201ENSMUST00000028728 Dapk3O54784 448 aa11.65□□□□□ -0.54
Ubr1-201ENSMUST00000028728 Ttc21bQ0HA38 1315 aa11.65□□□□□ -0.54
Ubr1-201ENSMUST00000028728 TkfcQ8VC30 578 aa11.65□□□□□ -0.54
Ubr1-201ENSMUST00000028728 StambpQ9CQ26 424 aa11.65□□□□□ -0.54
Ubr1-201ENSMUST00000028728 Zfp853A0A1D5RM95 733 aa11.65□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Wdr93Q402B2 695 aa11.65□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Tmem87bQ8BKU8 555 aa11.65□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Znf131Q8K3J5 619 aa11.65□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Ddx27Q921N6 760 aaKnown RBP11.65□□□□□ -0.55
Ubr1-201ENSMUST00000028728 SynmQ70IV5 1561 aa11.65□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Ift88Q61371 824 aa11.64□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Ppp1r10Q80W00 888 aaKnown RBP11.64□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Flad1Q8R123 492 aa11.64□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Hoxb7P09024 217 aa11.64□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Btbd11Q6GQW0 1109 aa11.64□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Znf526Q8BI66 675 aa11.64□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Rbm33Q9CXK9 1231 aaKnown RBP11.64□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Speer4aF8VPX6 267 aa11.64□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Trim34bJ3QNR8 485 aa11.64□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Api5O35841 504 aaKnown RBP11.64□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Arhgef6Q8K4I3 771 aa11.64□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Clec11aO88200 328 aa11.63□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Ranbp1P34022 203 aaKnown RBP11.63□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Ercc3P49135 783 aa11.63□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Spats2Q8K1N4 545 aaKnown RBP11.63□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Ebag9Q9D0V7 213 aa11.63□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Ptgs1P22437 602 aa11.63□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Cdr2P97817 455 aa11.63□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Cyp27a1Q9DBG1 533 aa11.63□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Ccdc152E9PX14 254 aa11.63□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Rps6ka5Q8C050 863 aa11.63□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Zscan29E9Q5B4 869 aa11.63□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Znf653Q6YND2 615 aa11.63□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Rnf41Q8BH75 317 aa11.63□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Plcd3Q8K2J0 785 aa11.63□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Pank2Q3U4S0 443 aa11.63□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Cnga2Q62398 664 aa11.63□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Spata24Q6P926 205 aa11.63□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Gbp8Q2V6D6 525 aa11.62□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Frat1P70339 274 aa11.62□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Ano6Q6P9J9 911 aa11.62□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Map3k11Q80XI6 850 aa11.62□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Gramd4Q8CB44 633 aa11.62□□□□□ -0.55
Ubr1-201ENSMUST00000028728 TrdnE9Q9K5 693 aa11.62□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Ube3aO08759 870 aa11.62□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Prim1P20664 417 aa11.62□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Hdhd2Q3UGR5 259 aa11.62□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Ano1Q8BHY3 960 aa11.62□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Sh3bp1P55194 680 aa11.62□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Stmn4P63042 189 aa11.62□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Atp8b2P98199 1209 aa11.62□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Tax1bp1Q3UKC1 814 aaKnown RBP11.62□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Rassf2Q8BMS9 326 aa11.62□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Urb2E9Q7L1 1524 aaKnown RBP11.62□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Gm28919A0A087WP35 240 aa11.62□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Gm3409A0A0G2JE67 319 aa11.62□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Cct2P80314 535 aaKnown RBP11.62□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Ano2Q8CFW1 1002 aa11.62□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Gdpd2Q9ESM6 539 aa11.62□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Zpr1Q62384 459 aa11.61□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Fkbp5Q64378 456 aa11.61□□□□□ -0.55
Ubr1-201ENSMUST00000028728 4921504E06RikQ8CET2 560 aa11.61□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Uso1Q9Z1Z0 959 aaKnown RBP11.61□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Bach2P97303 839 aa11.61□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Smg7Q5RJH6 1138 aaKnown RBP11.61□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Tnip1Q9WUU8 647 aa11.61□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Gm28510A0A087WP28 240 aa11.61□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Rbm8a2A0A0N4SUH6 174 aa11.61□□□□□ -0.55
Ubr1-201ENSMUST00000028728 NpcdF8VQB8 469 aa11.61□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Utp18Q5SSI6 552 aaKnown RBP11.61□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Pdzrn3Q69ZS0 1063 aa11.61□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Hook3Q8BUK6 718 aa11.61□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Rbm8aQ9CWZ3 174 aa11.61□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Nol7Q9D7Z3 254 aaKnown RBP11.61□□□□□ -0.55
Ubr1-201ENSMUST00000028728 Ndufa8Q9DCJ5 172 aa11.61□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms