RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 GALNT6Q8NCL4 622 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 SIMC1Q8NDZ2 872 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 PTPMT1Q8WUK0 201 aaPredicted RBP5.58□□□□□ -1.52
USP39-213ENST00000467885 NKD1Q969G9 470 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 EXOSC8Q96B26 276 aaKnown RBP5.58□□□□□ -1.52
USP39-213ENST00000467885 CTHRC1Q96CG8 243 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 LRRC58Q96CX6 371 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 PTCHD1Q96NR3 888 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 CCDC115Q96NT0 180 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 CNTNAP3BQ96NU0 1288 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 OR1F2PQ96R84 312 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 ZBTB18Q99592 522 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 MESP1Q9BRJ9 268 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 YIPF2Q9BWQ6 316 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 CNTNAP3Q9BZ76 1288 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 ULBP3Q9BZM4 244 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 C1orf21Q9H246 121 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 COPS7BQ9H9Q2 264 aaPredicted RBP5.58□□□□□ -1.52
USP39-213ENST00000467885 NANOGQ9H9S0 305 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 MKKSQ9NPJ1 570 aaPredicted RBP5.58□□□□□ -1.52
USP39-213ENST00000467885 ASCL3Q9NQ33 180 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 PRTFDC1Q9NRG1 225 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 ACSS1Q9NUB1 689 aaPredicted RBP5.58□□□□□ -1.52
USP39-213ENST00000467885 TXLNGQ9NUQ3 528 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 GPATCH2Q9NW75 528 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 SLC25A37Q9NYZ2 338 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 NTMQ9P121 344 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 ZNF282Q9UDV7 671 aaPredicted RBP5.58□□□□□ -1.52
USP39-213ENST00000467885 ZNF639Q9UID6 485 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 UTS2RQ9UKP6 389 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 FARSAQ9Y285 508 aaKnown RBP5.58□□□□□ -1.52
USP39-213ENST00000467885 PCDHB14Q9Y5E9 798 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 GVINP1Q7Z2Y8 2422 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 COL27A1Q8IZC6 1860 aaPredicted RBP5.58□□□□□ -1.52
USP39-213ENST00000467885 A0A096LPI6 279 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 LOC101059948A0A1B0GTJ6 334 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.57□□□□□ -1.52
USP39-213ENST00000467885 FXYD1O00168 92 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 NR5A2O00482 541 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 CPNE3O75131 537 aaKnown RBP5.57□□□□□ -1.52
USP39-213ENST00000467885 ERN1O75460 977 aaKnown RBP5.57□□□□□ -1.52
USP39-213ENST00000467885 ATP5HO75947 161 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 UNC5CO95185 931 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 C6orf47O95873 294 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 F12P00748 615 aaPredicted RBP5.57□□□□□ -1.52
USP39-213ENST00000467885 CAPNS1P04632 268 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 ATP1B1P05026 303 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 GSNP06396 782 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 UMODP07911 640 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 RAB40ALP0C0E4 278 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 NR2F6P10588 404 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 CPMP14384 443 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 TCN2P20062 427 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 MAOAP21397 527 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 FBLP22087 321 aaKnown RBP5.57□□□□□ -1.52
USP39-213ENST00000467885 PTPN4P29074 926 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 PPP2R1BP30154 601 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 GALNSP34059 522 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 CPA2P48052 419 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 GZMMP51124 257 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 MNAT1P51948 309 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 MVDP53602 400 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 EMP2P54851 167 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 MANFP55145 182 aaKnown RBP5.57□□□□□ -1.52
USP39-213ENST00000467885 SKP1P63208 163 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 SLC25A3Q00325 362 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 OCA2Q04671 838 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 MAP7Q14244 749 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 PUM1Q14671 1186 aaKnown RBP eCLIP5.57□□□□□ -1.52
USP39-213ENST00000467885 MAPRE2Q15555 327 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 PRICKLE4Q2TBC4 344 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 GTDC1Q4AE62 458 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 TRMT12Q53H54 448 aaKnown RBP5.57□□□□□ -1.52
USP39-213ENST00000467885 FHL5Q5TD97 284 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 FAM69BQ5VUD6 431 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 PGM2L1Q6PCE3 622 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 TMEM205Q6UW68 189 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 HACD2Q6Y1H2 254 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 ZNF621Q6ZSS3 439 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 MSANTD1Q6ZTZ1 278 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 ASRGL1Q7L266 308 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 ANKRD46Q86W74 232 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 CLEC4FQ8N1N0 589 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 RBM15BQ8NDT2 890 aaKnown RBP5.57□□□□□ -1.52
USP39-213ENST00000467885 NFAM1Q8NET5 270 aaPredicted RBP5.57□□□□□ -1.52
USP39-213ENST00000467885 VPS37AQ8NEZ2 397 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 ADCY4Q8NFM4 1077 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 CDC26Q8NHZ8 85 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 DOK4Q8TEW6 326 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 STARD8Q92502 1023 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 MR1Q95460 341 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 RCN3Q96D15 328 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 ELP4Q96EB1 424 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 RBM18Q96H35 190 aaKnown RBP5.57□□□□□ -1.52
USP39-213ENST00000467885 ITCHQ96J02 903 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 ZNF583Q96ND8 569 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 BBS4Q96RK4 519 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 HOPXQ9BPY8 73 aaPredicted RBP5.57□□□□□ -1.52
USP39-213ENST00000467885 BTBD10Q9BSF8 475 aa5.57□□□□□ -1.52
USP39-213ENST00000467885 SLC7A5P2Q9GIP4 190 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms