RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ZUFSPQ96AP4 578 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 FAM122AQ96E09 287 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 WDR34Q96EX3 536 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 MED8Q96G25 268 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 OR2A14Q96R47 310 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 GFM1Q96RP9 751 aaKnown RBP5.49□□□□□ -1.53
SCAF11-213ENST00000550629 TMEM79Q9BSE2 394 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 RTKNQ9BST9 563 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 TBC1D10AQ9BXI6 508 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 UNKQ9C0B0 810 aaKnown RBP5.49□□□□□ -1.53
SCAF11-213ENST00000550629 ABCG4Q9H172 646 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 LRRN3Q9H3W5 708 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 SERHL2Q9H4I8 314 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 XKR8Q9H6D3 395 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 TMEM140Q9NV12 185 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 DNAJC11Q9NVH1 559 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 WWOXQ9NZC7 414 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 SLC17A7Q9P2U7 560 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 OPTCQ9UBM4 332 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 SLC23A1Q9UHI7 598 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 PCTPQ9UKL6 214 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 PLAGL1Q9UM63 463 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 KCNE2Q9Y6J6 123 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 SDK1Q7Z5N4 2213 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 USP34Q70CQ2 3546 aa5.49□□□□□ -1.53
SCAF11-213ENST00000550629 KNL1Q8NG31 2342 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 KCNE1BA0A087WTH5 132 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 A0A0J9YY10 115 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 A0A1W2PQM1 296 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 GSAPA4D1B5 854 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 NCF1BA6NI72 391 aaPredicted RBP5.48□□□□□ -1.53
SCAF11-213ENST00000550629 NCF1CA8MVU1 366 aaPredicted RBP5.48□□□□□ -1.53
SCAF11-213ENST00000550629 ISM1B1AKI9 464 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 TMEM114B3SHH9 223 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 KLF11O14901 512 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 B3GALT2O43825 422 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 WDR47O94967 919 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 ZBTB11O95625 1053 aaPredicted RBP5.48□□□□□ -1.53
SCAF11-213ENST00000550629 OTCP00480 354 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 AMY1AP04745 511 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 MYF5P13349 255 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 NCF1P14598 390 aaPredicted RBP5.48□□□□□ -1.53
SCAF11-213ENST00000550629 EZRP15311 586 aaKnown RBP5.48□□□□□ -1.53
SCAF11-213ENST00000550629 TYRP1P17643 537 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 POLR2CP19387 275 aaPredicted RBP5.48□□□□□ -1.53
SCAF11-213ENST00000550629 CXCR2P25025 360 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 GSTM2P28161 218 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 EEF1DP29692 281 aaKnown RBP5.48□□□□□ -1.53
SCAF11-213ENST00000550629 PRDX3P30048 256 aaKnown RBP5.48□□□□□ -1.53
SCAF11-213ENST00000550629 PEBP1P30086 187 aaKnown RBP5.48□□□□□ -1.53
SCAF11-213ENST00000550629 SERPINB1P30740 379 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 ALDH3A1P30838 453 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 CCKBRP32239 447 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 HPDP32754 393 aaPredicted RBP5.48□□□□□ -1.53
SCAF11-213ENST00000550629 HSPA7P48741 367 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 AGTR2P50052 363 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 CCR8P51685 355 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 NAGLUP54802 743 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 PKNOX1P55347 436 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 CCL7P80098 99 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 HSD11B2P80365 405 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 ZFP36L1Q07352 338 aaKnown RBP5.48□□□□□ -1.53
SCAF11-213ENST00000550629 GALNT1Q10472 559 aaPredicted RBP5.48□□□□□ -1.53
SCAF11-213ENST00000550629 FASTKQ14296 549 aaKnown RBP5.48□□□□□ -1.53
SCAF11-213ENST00000550629 AMZ1Q400G9 498 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 PAGE2BQ5JRK9 111 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 CFAP157Q5JU67 520 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 ZNF678Q5SXM1 525 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 THEMIS2Q5TEJ8 643 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 ATG9BQ674R7 924 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 CYB5D1Q6P9G0 228 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 MBOAT1Q6ZNC8 495 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 ARHGAP22Q7Z5H3 698 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 C17orf64Q86WR6 236 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 NUDCD3Q8IVD9 361 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 C10orf107Q8IVU9 208 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 TBC1D19Q8N5T2 526 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 C1orf162Q8NEQ5 155 aaPredicted RBP5.48□□□□□ -1.53
SCAF11-213ENST00000550629 DEFB124Q8NES8 71 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 OR4K1Q8NGD4 311 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 OR56A1Q8NGH5 318 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 PPP4R1Q8TF05 950 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 SLC5A11Q8WWX8 675 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 NCSTNQ92542 709 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 RSC1A1Q92681 617 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 EXT2Q93063 718 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 UBE2E3Q969T4 207 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 PTCD3Q96EY7 689 aaKnown RBP5.48□□□□□ -1.53
SCAF11-213ENST00000550629 SLC41A2Q96JW4 573 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 CNDP1Q96KN2 507 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 IL17FQ96PD4 163 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 OR4K3Q96R72 315 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 ZNF382Q96SR6 550 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 SELENOSQ9BQE4 189 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 EFCAB11Q9BUY7 163 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 SARGQ9BW04 601 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 ATG10Q9H0Y0 220 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 PELI2Q9HAT8 420 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 EML4Q9HC35 981 aaKnown RBP5.48□□□□□ -1.53
SCAF11-213ENST00000550629 TMEM184CQ9NVA4 438 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms