RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 ZNF10P21506 573 aaPredicted RBP14.1□□□□□ -0.15
CSNK1E-208ENST00000431611 GSTM2P28161 218 aa14.1□□□□□ -0.15
CSNK1E-208ENST00000431611 PPP2R1BP30154 601 aa14.1□□□□□ -0.15
CSNK1E-208ENST00000431611 HNRNPH1P31943 449 aaKnown RBP14.1□□□□□ -0.15
CSNK1E-208ENST00000431611 SLC6A12P48065 614 aa14.1□□□□□ -0.15
CSNK1E-208ENST00000431611 SSR4P51571 173 aa14.1□□□□□ -0.15
CSNK1E-208ENST00000431611 GPR143P51810 404 aa14.1□□□□□ -0.15
CSNK1E-208ENST00000431611 HNRNPFP52597 415 aaKnown RBP14.1□□□□□ -0.15
CSNK1E-208ENST00000431611 ARL4CP56559 192 aa14.1□□□□□ -0.15
CSNK1E-208ENST00000431611 RAB38P57729 211 aa14.1□□□□□ -0.15
CSNK1E-208ENST00000431611 KRTAP10-9P60411 292 aa14.1□□□□□ -0.15
CSNK1E-208ENST00000431611 TLE4Q04727 773 aa14.1□□□□□ -0.15
CSNK1E-208ENST00000431611 C18orf21Q32NC0 220 aaPredicted RBP14.1□□□□□ -0.15
CSNK1E-208ENST00000431611 CEP128Q6ZU80 1094 aa14.1□□□□□ -0.15
CSNK1E-208ENST00000431611 KLHL7Q8IXQ5 586 aa14.1□□□□□ -0.15
CSNK1E-208ENST00000431611 KLHDC8AQ8IYD2 350 aa14.1□□□□□ -0.15
CSNK1E-208ENST00000431611 KRT78Q8N1N4 520 aa14.1□□□□□ -0.15
CSNK1E-208ENST00000431611 ANKRD49Q8WVL7 239 aa14.1□□□□□ -0.15
CSNK1E-208ENST00000431611 NCLNQ969V3 563 aa14.1□□□□□ -0.15
CSNK1E-208ENST00000431611 RHBDF1Q96CC6 855 aa14.1□□□□□ -0.15
CSNK1E-208ENST00000431611 VPS39Q96JC1 886 aa14.1□□□□□ -0.15
CSNK1E-208ENST00000431611 CAPS2Q9BXY5 557 aa14.1□□□□□ -0.15
CSNK1E-208ENST00000431611 KCMF1Q9P0J7 381 aa14.1□□□□□ -0.15
CSNK1E-208ENST00000431611 ERVK-11Q9UQG0 969 aa14.1□□□□□ -0.15
CSNK1E-208ENST00000431611 MRPS33Q9Y291 106 aaKnown RBP14.1□□□□□ -0.15
CSNK1E-208ENST00000431611 YARS2Q9Y2Z4 477 aaKnown RBP14.1□□□□□ -0.15
CSNK1E-208ENST00000431611 NCOA6Q14686 2063 aaPredicted RBP14.1□□□□□ -0.15
CSNK1E-208ENST00000431611 CSMD2Q7Z408 3487 aa14.09□□□□□ -0.15
CSNK1E-208ENST00000431611 ANKDD1BA6NHY2 528 aa14.09□□□□□ -0.15
CSNK1E-208ENST00000431611 USP27XA6NNY8 438 aa14.09□□□□□ -0.15
CSNK1E-208ENST00000431611 TGFBR3LH3BV60 316 aa14.09□□□□□ -0.15
CSNK1E-208ENST00000431611 CLEC3AO75596 197 aa14.09□□□□□ -0.15
CSNK1E-208ENST00000431611 TUBB4AP04350 444 aa14.09□□□□□ -0.15
CSNK1E-208ENST00000431611 HPDP32754 393 aaPredicted RBP14.09□□□□□ -0.15
CSNK1E-208ENST00000431611 PLA2G16P53816 162 aa14.09□□□□□ -0.15
CSNK1E-208ENST00000431611 DR1Q01658 176 aa14.09□□□□□ -0.15
CSNK1E-208ENST00000431611 BMPR2Q13873 1038 aa14.09□□□□□ -0.15
CSNK1E-208ENST00000431611 TMEM211Q6ICI0 200 aa14.09□□□□□ -0.15
CSNK1E-208ENST00000431611 ARHGAP11AQ6P4F7 1023 aa14.09□□□□□ -0.15
CSNK1E-208ENST00000431611 C16orf47Q6ZP98 133 aaPredicted RBP14.09□□□□□ -0.15
CSNK1E-208ENST00000431611 ZNF595Q8IYB9 648 aa14.09□□□□□ -0.15
CSNK1E-208ENST00000431611 TMEM132CQ8N3T6 1108 aa14.09□□□□□ -0.15
CSNK1E-208ENST00000431611 FAM47BQ8NA70 645 aa14.09□□□□□ -0.15
CSNK1E-208ENST00000431611 ACBD4Q8NC06 268 aa14.09□□□□□ -0.15
CSNK1E-208ENST00000431611 TMEM52Q8NDY8 209 aa14.09□□□□□ -0.15
CSNK1E-208ENST00000431611 FBXO36Q8NEA4 188 aa14.09□□□□□ -0.15
CSNK1E-208ENST00000431611 OR2L5Q8NG80 312 aa14.09□□□□□ -0.15
CSNK1E-208ENST00000431611 SEC16BQ96JE7 1060 aa14.09□□□□□ -0.15
CSNK1E-208ENST00000431611 QRFPRQ96P65 431 aa14.09□□□□□ -0.15
CSNK1E-208ENST00000431611 NT5DC2Q9H857 520 aa14.09□□□□□ -0.15
CSNK1E-208ENST00000431611 MCCC2Q9HCC0 563 aa14.09□□□□□ -0.15
CSNK1E-208ENST00000431611 ADAP2Q9NPF8 381 aa14.09□□□□□ -0.15
CSNK1E-208ENST00000431611 MOCS1Q9NZB8 636 aa14.09□□□□□ -0.15
CSNK1E-208ENST00000431611 CLDN16Q9Y5I7 305 aa14.09□□□□□ -0.15
CSNK1E-208ENST00000431611 HRH3Q9Y5N1 445 aa14.09□□□□□ -0.15
CSNK1E-208ENST00000431611 TEP1Q99973 2627 aaKnown RBP14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 SYNDIG1LA6NDD5 238 aa14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 NCF1BA6NI72 391 aaPredicted RBP14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 A8MVJ9 347 aa14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 NCF1CA8MVU1 366 aaPredicted RBP14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 PRKNO60260 465 aaPredicted RBP14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 OR2J2O76002 312 aa14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 PDE9AO76083 593 aa14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 IFNA16P05015 189 aa14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 NCF1P14598 390 aaPredicted RBP14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 SLC12A2P55011 1212 aa14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 RIPPLY3P57055 190 aa14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 PDIA2Q13087 525 aaKnown RBP14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 RCN2Q14257 317 aa14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 TGFBIQ15582 683 aa14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 ELAVL1Q15717 326 aaKnown RBP14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 TRIM40Q6P9F5 258 aa14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 PAOXQ6QHF9 649 aa14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 CLNKQ7Z7G1 428 aa14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 GPALPP1Q8IXQ4 340 aa14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 MARVELD2Q8N4S9 558 aa14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 PSD4Q8NDX1 1056 aa14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 OR52N2Q8NGI0 321 aa14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 ASB5Q8WWX0 329 aa14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 RUNDC3BQ96NL0 473 aa14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 SERINC2Q96SA4 455 aa14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 PITHD1Q9GZP4 211 aaPredicted RBP14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 REXO4Q9GZR2 422 aaKnown RBP14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 DEFB127Q9H1M4 99 aa14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 TP63Q9H3D4 680 aaPredicted RBP14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 RHOJQ9H4E5 214 aa14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 COPS7BQ9H9Q2 264 aaPredicted RBP14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 LIN28AQ9H9Z2 209 aaKnown RBP14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 POPDC3Q9HBV1 291 aa14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 PLSCR2Q9NRY7 297 aa14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 HPF1Q9NWY4 346 aa14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 NSMCE4AQ9NXX6 385 aa14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 GPRC5BQ9NZH0 403 aa14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 CLCA3PQ9Y6N3 262 aa14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 PKDREJQ9NTG1 2253 aa14.08□□□□□ -0.16
CSNK1E-208ENST00000431611 TMEM200CA6NKL6 621 aa14.07□□□□□ -0.16
CSNK1E-208ENST00000431611 CYR61O00622 381 aa14.07□□□□□ -0.16
CSNK1E-208ENST00000431611 FANCGO15287 622 aa14.07□□□□□ -0.16
CSNK1E-208ENST00000431611 CTNSO60931 367 aa14.07□□□□□ -0.16
CSNK1E-208ENST00000431611 SEC31AO94979 1220 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms