RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 MAGEB16A2A368 324 aa16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 SDR42E2A6NKP2 422 aa16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 FIGNL2A6NMB9 653 aa16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 G3V3Y1 287 aa16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 GOLGA8MH3BSY2 632 aa16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 DNASE1P24855 282 aa16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 ACVR2AP27037 513 aa16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 ZNF75DP51815 510 aa16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 GPS1Q13098 491 aa16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 CATSPEREQ5SY80 951 aa16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 DRICH1Q6PGQ1 229 aaPredicted RBP16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 C16orf47Q6ZP98 133 aaPredicted RBP16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 RNF10Q8N5U6 811 aaKnown RBP16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 APCDD1LQ8NCL9 501 aa16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 CALML6Q8TD86 181 aa16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 CREB3L4Q8TEY5 395 aa16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 ASB15Q8WXK1 588 aa16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 VMP1Q96GC9 406 aa16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 PDLIM2Q96JY6 352 aa16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 SMC6Q96SB8 1091 aa16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 GPATCH1Q9BRR8 931 aaKnown RBP16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 TTYH2Q9BSA4 534 aa16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 AARSD1Q9BTE6 412 aaKnown RBP16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 CXXC4Q9H2H0 198 aa16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 DEPPQ9NTK1 212 aa16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 ARL15Q9NXU5 204 aa16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 ZFP69BQ9UJL9 534 aa16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 FBXO5Q9UKT4 447 aa16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 PLEKHA6Q9Y2H5 1048 aa16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 YARS2Q9Y2Z4 477 aaKnown RBP16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 MAD1L1Q9Y6D9 718 aa16.78■□□□□ 0.28
CHCHD3-203ENST00000448878 PINLYPA6NC86 204 aa16.77■□□□□ 0.28
CHCHD3-203ENST00000448878 EIF3FO00303 357 aaPredicted RBP16.77■□□□□ 0.28
CHCHD3-203ENST00000448878 ZFAND5O76080 213 aa16.77■□□□□ 0.28
CHCHD3-203ENST00000448878 SAT1P21673 171 aa16.77■□□□□ 0.28
CHCHD3-203ENST00000448878 DGKQP52824 942 aa16.77■□□□□ 0.28
CHCHD3-203ENST00000448878 FOXD4Q12950 439 aaPredicted RBP16.77■□□□□ 0.28
CHCHD3-203ENST00000448878 RBBP5Q15291 538 aaKnown RBP16.77■□□□□ 0.28
CHCHD3-203ENST00000448878 PHKG1Q16816 387 aa16.77■□□□□ 0.28
CHCHD3-203ENST00000448878 DUPD1Q68J44 220 aa16.77■□□□□ 0.28
CHCHD3-203ENST00000448878 ARSKQ6UWY0 536 aa16.77■□□□□ 0.28
CHCHD3-203ENST00000448878 B3GNT6Q6ZMB0 384 aa16.77■□□□□ 0.28
CHCHD3-203ENST00000448878 WDR53Q7Z5U6 358 aaPredicted RBP16.77■□□□□ 0.28
CHCHD3-203ENST00000448878 CAND1Q86VP6 1230 aaKnown RBP16.77■□□□□ 0.28
CHCHD3-203ENST00000448878 SLC22A16Q86VW1 577 aa16.77■□□□□ 0.28
CHCHD3-203ENST00000448878 ABHD11Q8NFV4 315 aa16.77■□□□□ 0.28
CHCHD3-203ENST00000448878 OR2M7Q8NG81 312 aa16.77■□□□□ 0.28
CHCHD3-203ENST00000448878 OR4K1Q8NGD4 311 aa16.77■□□□□ 0.28
CHCHD3-203ENST00000448878 GOT1L1Q8NHS2 421 aaPredicted RBP16.77■□□□□ 0.28
CHCHD3-203ENST00000448878 NT5CQ8TCD5 201 aa16.77■□□□□ 0.28
CHCHD3-203ENST00000448878 MAIP1Q8WWC4 291 aa16.77■□□□□ 0.28
CHCHD3-203ENST00000448878 NCLNQ969V3 563 aa16.77■□□□□ 0.28
CHCHD3-203ENST00000448878 RMND5BQ96G75 393 aaPredicted RBP16.77■□□□□ 0.28
CHCHD3-203ENST00000448878 TSNARE1Q96NA8 513 aa16.77■□□□□ 0.28
CHCHD3-203ENST00000448878 TRIM54Q9BYV2 358 aa16.77■□□□□ 0.28
CHCHD3-203ENST00000448878 LDAHQ9H6V9 325 aa16.77■□□□□ 0.28
CHCHD3-203ENST00000448878 EXO5Q9H790 373 aa16.77■□□□□ 0.28
CHCHD3-203ENST00000448878 IARS2Q9NSE4 1012 aaKnown RBP16.77■□□□□ 0.28
CHCHD3-203ENST00000448878 ACAD8Q9UKU7 415 aa16.77■□□□□ 0.28
CHCHD3-203ENST00000448878 EDARQ9UNE0 448 aa16.77■□□□□ 0.28
CHCHD3-203ENST00000448878 BCKDKO14874 412 aa16.76■□□□□ 0.27
CHCHD3-203ENST00000448878 CTAG2O75638 210 aa16.76■□□□□ 0.27
CHCHD3-203ENST00000448878 FAM155BO75949 473 aa16.76■□□□□ 0.27
CHCHD3-203ENST00000448878 OR2J2O76002 312 aa16.76■□□□□ 0.27
CHCHD3-203ENST00000448878 GUCA1CO95843 209 aa16.76■□□□□ 0.27
CHCHD3-203ENST00000448878 FGGP02679 453 aa16.76■□□□□ 0.27
CHCHD3-203ENST00000448878 KIR2DL3P43628 341 aa16.76■□□□□ 0.27
CHCHD3-203ENST00000448878 DLX5P56178 289 aa16.76■□□□□ 0.27
CHCHD3-203ENST00000448878 DHX9Q08211 1270 aaKnown RBP16.76■□□□□ 0.27
CHCHD3-203ENST00000448878 SP140Q13342 867 aa16.76■□□□□ 0.27
CHCHD3-203ENST00000448878 BMPR2Q13873 1038 aa16.76■□□□□ 0.27
CHCHD3-203ENST00000448878 TOR1AIP1Q5JTV8 583 aa16.76■□□□□ 0.27
CHCHD3-203ENST00000448878 ANKRD22Q5VYY1 191 aa16.76■□□□□ 0.27
CHCHD3-203ENST00000448878 PAQR3Q6TCH7 311 aa16.76■□□□□ 0.27
CHCHD3-203ENST00000448878 ARMC10Q8N2F6 343 aa16.76■□□□□ 0.27
CHCHD3-203ENST00000448878 LINGO1Q96FE5 620 aa16.76■□□□□ 0.27
CHCHD3-203ENST00000448878 FAR2Q96K12 515 aa16.76■□□□□ 0.27
CHCHD3-203ENST00000448878 TTTY12Q9BZ98 90 aa16.76■□□□□ 0.27
CHCHD3-203ENST00000448878 SPNS1Q9H2V7 528 aa16.76■□□□□ 0.27
CHCHD3-203ENST00000448878 CLEC4MQ9H2X3 399 aaPredicted RBP16.76■□□□□ 0.27
CHCHD3-203ENST00000448878 KLHL31Q9H511 634 aa16.76■□□□□ 0.27
CHCHD3-203ENST00000448878 TAS2R13Q9NYV9 303 aa16.76■□□□□ 0.27
CHCHD3-203ENST00000448878 L3MBTL1Q9Y468 752 aa16.76■□□□□ 0.27
CHCHD3-203ENST00000448878 PRRC2AP48634 2157 aaKnown RBP16.76■□□□□ 0.27
CHCHD3-203ENST00000448878 NIPBLQ6KC79 2804 aaeCLIP16.75■□□□□ 0.276e-6■■■□□ 17.7
CHCHD3-203ENST00000448878 IGKV3D-11A0A0A0MRZ8 115 aa16.75■□□□□ 0.27
CHCHD3-203ENST00000448878 A0A0G2JNJ9 132 aa16.75■□□□□ 0.27
CHCHD3-203ENST00000448878 ZCWPW2A0A1B0GU75 182 aa16.75■□□□□ 0.27
CHCHD3-203ENST00000448878 WWP2O00308 870 aa16.75■□□□□ 0.27
CHCHD3-203ENST00000448878 GLI4P10075 376 aa16.75■□□□□ 0.27
CHCHD3-203ENST00000448878 AHRP35869 848 aa16.75■□□□□ 0.27
CHCHD3-203ENST00000448878 SCTRP47872 440 aa16.75■□□□□ 0.27
CHCHD3-203ENST00000448878 BTN3A2P78410 334 aa16.75■□□□□ 0.27
CHCHD3-203ENST00000448878 SLC13A2Q13183 592 aa16.75■□□□□ 0.27
CHCHD3-203ENST00000448878 ZNF750Q32MQ0 723 aa16.75■□□□□ 0.27
CHCHD3-203ENST00000448878 HSP90AA5PQ58FG0 334 aa16.75■□□□□ 0.27
CHCHD3-203ENST00000448878 FBXW10Q5XX13 1052 aa16.75■□□□□ 0.27
CHCHD3-203ENST00000448878 RGS9BPQ6ZS82 235 aa16.75■□□□□ 0.27
CHCHD3-203ENST00000448878 KIAA0408Q6ZU52 694 aa16.75■□□□□ 0.27
CHCHD3-203ENST00000448878 LIX1LQ8IVB5 337 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms