RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 PTPN6P29350 595 aa12.3□□□□□ -0.44
HERC3-203ENST00000407637 CD86P42081 329 aa12.3□□□□□ -0.44
HERC3-203ENST00000407637 DGKEP52429 567 aa12.3□□□□□ -0.44
HERC3-203ENST00000407637 VSX2P58304 361 aaPredicted RBP12.3□□□□□ -0.44
HERC3-203ENST00000407637 ITKQ08881 620 aa12.3□□□□□ -0.44
HERC3-203ENST00000407637 PPIGQ13427 754 aaKnown RBP eCLIP12.3□□□□□ -0.44
HERC3-203ENST00000407637 LRIF1Q5T3J3 769 aa12.3□□□□□ -0.44
HERC3-203ENST00000407637 NXPE2Q96DL1 559 aa12.3□□□□□ -0.44
HERC3-203ENST00000407637 GPR21Q99679 349 aa12.3□□□□□ -0.44
HERC3-203ENST00000407637 KCNJ15Q99712 375 aa12.3□□□□□ -0.44
HERC3-203ENST00000407637 POLR2J2Q9GZM3 115 aaKnown RBP12.3□□□□□ -0.44
HERC3-203ENST00000407637 SLC39A1Q9NY26 324 aa12.3□□□□□ -0.44
HERC3-203ENST00000407637 GLS2Q9UI32 602 aa12.3□□□□□ -0.44
HERC3-203ENST00000407637 KIF25Q9UIL4 384 aa12.3□□□□□ -0.44
HERC3-203ENST00000407637 CCL27Q9Y4X3 112 aa12.3□□□□□ -0.44
HERC3-203ENST00000407637 OTOFQ9HC10 1997 aa12.3□□□□□ -0.44
HERC3-203ENST00000407637 IGKV6-21A0A0C4DH24 114 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 M0R233 179 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 TNFRSF11BO00300 401 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 ARF4P18085 180 aaPredicted RBP12.29□□□□□ -0.44
HERC3-203ENST00000407637 CSKP41240 450 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 HOXA1P49639 335 aaPredicted RBP12.29□□□□□ -0.44
HERC3-203ENST00000407637 ZNF33AQ06730 810 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 SGO1Q5FBB7 561 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 BICRALQ6AI39 1079 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 PAQR6Q6TCH4 344 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 OR9Q2Q8NGE9 314 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 SLC5A11Q8WWX8 675 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 MTFMTQ96DP5 389 aaKnown RBP12.29□□□□□ -0.44
HERC3-203ENST00000407637 C7orf34Q96L11 122 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 FDXACB1Q9BRP7 624 aaPredicted RBP12.29□□□□□ -0.44
HERC3-203ENST00000407637 TMEM175Q9BSA9 504 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 KCNH6Q9H252 994 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 ARNT2Q9HBZ2 717 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 GPRC5BQ9NZH0 403 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 HCN3Q9P1Z3 774 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 EXO1Q9UQ84 846 aaKnown RBP12.29□□□□□ -0.44
HERC3-203ENST00000407637 YARS2Q9Y2Z4 477 aaKnown RBP12.29□□□□□ -0.44
HERC3-203ENST00000407637 ARL5AQ9Y689 179 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 PDCD11Q14690 1871 aaKnown RBP12.29□□□□□ -0.44
HERC3-203ENST00000407637 TCRBV16S1A1N1A0A5B0 115 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 LINC00587B1AMM8 73 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 OR7A17O14581 309 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 LRRTM2O43300 516 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 LDB2O43679 373 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 HAPLN1P10915 354 aaPredicted RBP12.29□□□□□ -0.44
HERC3-203ENST00000407637 DARSP14868 501 aaKnown RBP12.29□□□□□ -0.44
HERC3-203ENST00000407637 HOXB9P17482 250 aaPredicted RBP12.29□□□□□ -0.44
HERC3-203ENST00000407637 BTG1P62324 171 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 CSTF1Q05048 431 aaKnown RBP12.29□□□□□ -0.44
HERC3-203ENST00000407637 UGT8Q16880 541 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 FAM187BQ17R55 369 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 VMACQ2NL98 169 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 MRNIPQ6NTE8 343 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 TMIGD1Q6UXZ0 262 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 CBLL1Q75N03 491 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 KANSL1Q7Z3B3 1105 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 GPR155Q7Z3F1 870 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 GPSM1Q86YR5 675 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 CRYBG2Q8N1P7 616 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 VPS37AQ8NEZ2 397 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 OR2T4Q8NH00 348 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 COQ10AQ96MF6 247 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 KATNB1Q9BVA0 655 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 POFUT2Q9Y2G5 429 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 PADI2Q9Y2J8 665 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 PCDHGB3Q9Y5G1 929 aa12.29□□□□□ -0.44
HERC3-203ENST00000407637 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.28□□□□□ -0.44
HERC3-203ENST00000407637 KRBOX1C9JBD0 128 aa12.28□□□□□ -0.44
HERC3-203ENST00000407637 TOXO94900 526 aa12.28□□□□□ -0.44
HERC3-203ENST00000407637 CBX7O95931 251 aa12.28□□□□□ -0.44
HERC3-203ENST00000407637 TNFRSF1BP20333 461 aa12.28□□□□□ -0.44
HERC3-203ENST00000407637 DNASE1P24855 282 aa12.28□□□□□ -0.44
HERC3-203ENST00000407637 PPP3R1P63098 170 aa12.28□□□□□ -0.44
HERC3-203ENST00000407637 GPR176Q14439 515 aa12.28□□□□□ -0.44
HERC3-203ENST00000407637 IHHQ14623 411 aa12.28□□□□□ -0.44
HERC3-203ENST00000407637 TEAD4Q15561 434 aa12.28□□□□□ -0.44
HERC3-203ENST00000407637 LTB4RQ15722 352 aa12.28□□□□□ -0.44
HERC3-203ENST00000407637 MICAQ29983 383 aa12.28□□□□□ -0.44
HERC3-203ENST00000407637 EFCAB12Q6NXP0 572 aa12.28□□□□□ -0.44
HERC3-203ENST00000407637 PTCHD4Q6ZW05 846 aa12.28□□□□□ -0.44
HERC3-203ENST00000407637 GOLGA7Q7Z5G4 137 aa12.28□□□□□ -0.44
HERC3-203ENST00000407637 OR13C4Q8NGS5 318 aa12.28□□□□□ -0.44
HERC3-203ENST00000407637 OR52P1PQ8NH57 321 aa12.28□□□□□ -0.44
HERC3-203ENST00000407637 YIPF5Q969M3 257 aa12.28□□□□□ -0.44
HERC3-203ENST00000407637 AHCYL2Q96HN2 611 aaKnown RBP12.28□□□□□ -0.44
HERC3-203ENST00000407637 NELL2Q99435 816 aa12.28□□□□□ -0.44
HERC3-203ENST00000407637 PELOQ9BRX2 385 aaKnown RBP12.28□□□□□ -0.44
HERC3-203ENST00000407637 ABCG8Q9H221 673 aa12.28□□□□□ -0.44
HERC3-203ENST00000407637 ATP13A1Q9HD20 1204 aa12.28□□□□□ -0.44
HERC3-203ENST00000407637 CLN6Q9NWW5 311 aa12.28□□□□□ -0.44
HERC3-203ENST00000407637 TAS2R13Q9NYV9 303 aa12.28□□□□□ -0.44
HERC3-203ENST00000407637 PTTG3PQ9NZH4 202 aa12.28□□□□□ -0.44
HERC3-203ENST00000407637 FNIP2Q9P278 1114 aa12.28□□□□□ -0.44
HERC3-203ENST00000407637 NEU3Q9UQ49 428 aa12.28□□□□□ -0.44
HERC3-203ENST00000407637 ANKRD31Q8N7Z5 1873 aa12.28□□□□□ -0.44
HERC3-203ENST00000407637 POM121CA8CG34 1229 aa12.28□□□□□ -0.44
HERC3-203ENST00000407637 MMP20O60882 483 aa12.28□□□□□ -0.44
HERC3-203ENST00000407637 OR56A5P0C7T3 313 aa12.28□□□□□ -0.44
HERC3-203ENST00000407637 HLA-EP13747 358 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms