RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 ZNF487B1APH4 448 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 LOC110117498-PIK3R3F6TDL0 507 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 M0QZK8 103 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 WNT9AO14904 365 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 TCAPO15273 167 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 HSPA12AO43301 675 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 MED6O75586 246 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 RECQL5O94762 991 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 SIX3O95343 332 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 MT-ATP6P00846 226 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 IFNGP01579 166 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 MT-ND2P03891 347 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 SERPINB2P05120 415 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 SERPING1P05155 500 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 RBP1P09455 135 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 SLC35E2BP0CK96 405 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 SLC35E2P0CK97 266 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 CCNB1P14635 433 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 NQO1P15559 274 aaKnown RBP4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 PSMC3P17980 439 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 CNR1P21554 472 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 KCNA3P22001 575 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 HTR1BP28222 390 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 CST5P28325 142 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 LAP3P28838 519 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 CCND3P30281 292 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 ICAM3P32942 547 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 SREBF1P36956 1147 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 TGFBR2P37173 567 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 SLC1A2P43004 574 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 LSSP48449 732 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 VAV2P52735 878 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 ADKP55263 362 aaKnown RBP4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 NME5P56597 212 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 NRG3P56975 720 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 UBE2G2P60604 165 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 VSNL1P62760 191 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 SUMO1P63165 101 aaKnown RBP4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 GNGT1P63211 74 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 SLC25A3Q00325 362 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 GAGE1Q13065 139 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 SLC39A6Q13433 755 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 ALKBH1Q13686 389 aaKnown RBP4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 CEBPEQ15744 281 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 GPR19Q15760 415 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 COQ5Q5HYK3 327 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 NOMO2Q5JPE7 1267 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 FAM47AQ5JRC9 791 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 ACER2Q5QJU3 275 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 RABGAP1LQ5R372 815 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 PDZK1Q5T2W1 519 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 HACD4Q5VWC8 232 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 ANKS6Q68DC2 871 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 METTL7BQ6UX53 244 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 UBE2R2Q712K3 238 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 MAEAQ7L5Y9 396 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 SNX20Q7Z614 316 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 TFAP2DQ7Z6R9 452 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 VTCN1Q7Z7D3 282 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 ADGRE4PQ86SQ3 457 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 YRDCQ86U90 279 aaKnown RBP4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 COL23A1Q86Y22 540 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 LRRC8AQ8IWT6 810 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 DHX40Q8IX18 779 aaKnown RBP4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 CENPLQ8N0S6 344 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 NLGN4XQ8N0W4 816 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 NXPE1Q8N323 547 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 MIER2Q8N344 545 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 MREGQ8N565 214 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 SYT14Q8NB59 555 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 RBM15BQ8NDT2 890 aaKnown RBP4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 AGBL3Q8NEM8 1001 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 GPRC5AQ8NFJ5 357 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 OR10A7Q8NGE5 316 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 OR52N2Q8NGI0 321 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 OR2L8Q8NGY9 312 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 C9orf43Q8TAL5 461 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 ACTL9Q8TC94 416 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 MAGEE2Q8TD90 523 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 MRGPRDQ8TDS7 321 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 ELP5Q8TE02 316 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 SLC35F5Q8WV83 523 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 KBTBD7Q8WVZ9 684 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 DNAJC9Q8WXX5 260 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 THAP4Q8WY91 577 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 RIN2Q8WYP3 895 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 C22orf15Q8WYQ4 148 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 MAFIPQ8WZ33 124 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 PHYHIPQ92561 330 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 RAB1CQ92928 201 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 TCEAL3Q969E4 200 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 TOP1MTQ969P6 601 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 FUBP1Q96AE4 644 aaKnown RBP4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 SLC7A6OSQ96CW6 309 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 ELP4Q96EB1 424 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 PTCD3Q96EY7 689 aaKnown RBP4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 TMEM176AQ96HP8 235 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 SCLYQ96I15 445 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 PRRC1Q96M27 445 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 SERPINB12Q96P63 405 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms