RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR53, Length 91 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR53	snR53	RSC4	Q02206	625 aa		0.89	□□□□□ -2.27
snR53	snR53	NEW1	Q08972	1196 aa	Known RBP	0.89	□□□□□ -2.27
snR53	snR53	ENA5	Q12691	1091 aa		0.89	□□□□□ -2.27
snR53	snR53	YLR149C	Q99296	730 aa		0.89	□□□□□ -2.27
snR53	snR53	FLP1	P03870	423 aa		0.88	□□□□□ -2.27
snR53	snR53	TRP4	P07285	380 aa	Predicted RBP	0.88	□□□□□ -2.27
snR53	snR53	RVS167	P39743	482 aa	Known RBP	0.88	□□□□□ -2.27
snR53	snR53	XBP1	P40489	647 aa		0.88	□□□□□ -2.27
snR53	snR53	PNP1	Q05788	311 aa		0.88	□□□□□ -2.27
snR53	snR53	RPP2A	P05319	106 aa	Known RBP	0.87	□□□□□ -2.27
snR53	snR53	SPO11	P23179	398 aa		0.87	□□□□□ -2.27
snR53	snR53	MSH3	P25336	1018 aa		0.87	□□□□□ -2.27
snR53	snR53	RPN3	P40016	523 aa	Known RBP	0.87	□□□□□ -2.27
snR53	snR53	DAS1	P47005	663 aa		0.87	□□□□□ -2.27
snR53	snR53	LSO1	Q3E827	93 aa		0.87	□□□□□ -2.27
snR53	snR53	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	0.86	□□□□□ -2.27	not detected
snR53	snR53	PEX13	P80667	386 aa		0.86	□□□□□ -2.27
snR53	snR53	APM1	Q00776	475 aa	Predicted RBP	0.86	□□□□□ -2.27
snR53	snR53	PTC5	Q12511	572 aa		0.86	□□□□□ -2.27
snR53	snR53	VMA4	P22203	233 aa	Known RBP	0.85	□□□□□ -2.27
snR53	snR53	ADD66	P36040	267 aa		0.85	□□□□□ -2.27
snR53	snR53	LTP1	P40347	161 aa		0.85	□□□□□ -2.27
snR53	snR53	ZAP1	P47043	880 aa		0.85	□□□□□ -2.27
snR53	snR53	YPL068C	Q02749	293 aa		0.85	□□□□□ -2.27
snR53	snR53	NOG1	Q02892	647 aa	Known RBP	0.85	□□□□□ -2.27
snR53	snR53	RKM2	Q03942	479 aa		0.85	□□□□□ -2.27
snR53	snR53	PCL5	P38794	229 aa		0.84	□□□□□ -2.27
snR53	snR53	MAF1	P41910	395 aa		0.84	□□□□□ -2.27
snR53	snR53	NCS6	P53088	359 aa		0.84	□□□□□ -2.27
snR53	snR53	CWC15	Q03772	175 aa	Known RBP	0.84	□□□□□ -2.27
snR53	snR53	BSC2	Q05611	235 aa		0.84	□□□□□ -2.27
snR53	snR53	GUP2	Q08929	609 aa		0.84	□□□□□ -2.27
snR53	snR53	AFG2	P32794	780 aa		0.83	□□□□□ -2.28
snR53	snR53	INP54	Q08227	384 aa	Known RBP	0.83	□□□□□ -2.28
snR53	snR53	FRE5	Q08908	694 aa		0.83	□□□□□ -2.28
snR53	snR53	DMA1	P38823	416 aa		0.82	□□□□□ -2.28
snR53	snR53	ATG13	Q06628	738 aa		0.82	□□□□□ -2.28
snR53	snR53	ACE2	P21192	770 aa		0.81	□□□□□ -2.28
snR53	snR53	VPS34	P22543	875 aa		0.81	□□□□□ -2.28
snR53	snR53	ALG3	P38179	458 aa		0.81	□□□□□ -2.28
snR53	snR53	SCW10	Q04951	389 aa		0.81	□□□□□ -2.28
snR53	snR53	FUR4	P05316	633 aa	Known RBP	0.8	□□□□□ -2.28
snR53	snR53	ERG11	P10614	530 aa		0.8	□□□□□ -2.28
snR53	snR53	SEC23	P15303	768 aa	Known RBP	0.8	□□□□□ -2.28
snR53	snR53	SDS24	P38314	527 aa		0.8	□□□□□ -2.28
snR53	snR53	DAK2	P43550	591 aa		0.8	□□□□□ -2.28
snR53	snR53	OSW1	Q08692	278 aa		0.8	□□□□□ -2.28
snR53	snR53	YPL260W	Q08977	551 aa		0.8	□□□□□ -2.28
snR53	snR53	SPE1	P08432	466 aa		0.79	□□□□□ -2.28
snR53	snR53	DMC1	P25453	334 aa		0.79	□□□□□ -2.28
snR53	snR53	HRB1	P38922	454 aa	Known RBP RIP-Chip data	0.79	□□□□□ -2.28	not detected
snR53	snR53	YNL011C	P53980	444 aa		0.79	□□□□□ -2.28
snR53	snR53	UFD2	P54860	961 aa		0.79	□□□□□ -2.28
snR53	snR53	NUP1	P20676	1076 aa		0.78	□□□□□ -2.28
snR53	snR53	HFM1	P51979	1187 aa		0.78	□□□□□ -2.28
snR53	snR53	WHI4	Q07655	649 aa	Known RBP	0.78	□□□□□ -2.28
snR53	snR53	NDD1	Q08887	554 aa		0.78	□□□□□ -2.28
snR53	snR53	EMP70	P32802	667 aa		0.77	□□□□□ -2.29
snR53	snR53	IRC8	P47046	822 aa		0.77	□□□□□ -2.29
snR53	snR53	RSM26	P47141	266 aa		0.77	□□□□□ -2.29
snR53	snR53	YGR012W	P53206	393 aa		0.77	□□□□□ -2.29
snR53	snR53	EST2	Q06163	884 aa		0.77	□□□□□ -2.29
snR53	snR53	XYL2	Q07993	356 aa		0.77	□□□□□ -2.29
snR53	snR53	DED1	P06634	604 aa	Known RBP	0.76	□□□□□ -2.29
snR53	snR53	GCS1	P35197	352 aa		0.76	□□□□□ -2.29
snR53	snR53	TTI1	P36097	1038 aa		0.76	□□□□□ -2.29
snR53	snR53	YEL020C	P39994	560 aa		0.76	□□□□□ -2.29
snR53	snR53	URM1	P40554	99 aa	Predicted RBP	0.76	□□□□□ -2.29
snR53	snR53	ERG5	P54781	538 aa		0.76	□□□□□ -2.29
snR53	snR53	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	0.76	□□□□□ -2.29	not detected
snR53	snR53	ADY4	Q05955	493 aa		0.76	□□□□□ -2.29
snR53	snR53	PGK1	P00560	416 aa	Known RBP	0.75	□□□□□ -2.29
snR53	snR53	BAS1	P22035	811 aa		0.75	□□□□□ -2.29
snR53	snR53	PUP1	P25043	261 aa		0.75	□□□□□ -2.29
snR53	snR53	RDH54	P38086	958 aa		0.75	□□□□□ -2.29
snR53	snR53	CCC2	P38995	1004 aa		0.75	□□□□□ -2.29
snR53	snR53	BOL3	P39724	118 aa		0.75	□□□□□ -2.29
snR53	snR53	ENP2	P48234	707 aa	Known RBP	0.75	□□□□□ -2.29
snR53	snR53	PSP2	P50109	593 aa	Known RBP	0.75	□□□□□ -2.29
snR53	snR53	DAM1	P53267	343 aa		0.75	□□□□□ -2.29
snR53	snR53	STP1	Q00947	519 aa		0.75	□□□□□ -2.29
snR53	snR53	MET3	P08536	511 aa		0.74	□□□□□ -2.29
snR53	snR53	YER152C	P10356	443 aa		0.74	□□□□□ -2.29
snR53	snR53	SRP101	P32916	621 aa		0.74	□□□□□ -2.29
snR53	snR53	SQT1	P35184	431 aa		0.74	□□□□□ -2.29
snR53	snR53	PEX28	P38848	579 aa		0.74	□□□□□ -2.29
snR53	snR53	ELO3	P40319	345 aa		0.74	□□□□□ -2.29
snR53	snR53	YGL176C	P46945	554 aa		0.74	□□□□□ -2.29
snR53	snR53	CDA1	Q06702	301 aa		0.74	□□□□□ -2.29
snR53	snR53	RPN13	O13563	156 aa		0.73	□□□□□ -2.29
snR53	snR53	BI4	P03879	638 aa		0.73	□□□□□ -2.29
snR53	snR53	UGA2	P38067	497 aa		0.73	□□□□□ -2.29
snR53	snR53	CBR1	P38626	284 aa	Known RBP	0.73	□□□□□ -2.29
snR53	snR53	RRT14	P40470	206 aa		0.73	□□□□□ -2.29
snR53	snR53	DLT1	Q04216	342 aa		0.73	□□□□□ -2.29
snR53	snR53	CRR1	Q05790	422 aa		0.73	□□□□□ -2.29
snR53	snR53	HEM13	P11353	328 aa	Known RBP	0.72	□□□□□ -2.29
snR53	snR53	LSB5	P25369	354 aa		0.72	□□□□□ -2.29
snR53	snR53	YJL206C	P39529	758 aa		0.72	□□□□□ -2.29
snR53	snR53	SLU7	Q02775	382 aa	Known RBP	0.72	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 51 ms