RNA–Protein interactions for RNA: YPR032W

SRO7, Transcript of Effector of Rab GTPase Sec4p, yeastyeast

Gene SRO7, Length 3,102 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRO7YPR032W HOP2P53187 214 aa4.3□□□□□ -1.72
SRO7YPR032W NSE1Q07913 336 aa4.3□□□□□ -1.72
SRO7YPR032W TAF3Q12297 353 aa4.3□□□□□ -1.72
SRO7YPR032W IES3Q12345 250 aa4.3□□□□□ -1.72
SRO7YPR032W ENO2P00925 437 aaKnown RBP4.29□□□□□ -1.72
SRO7YPR032W PRP4P20053 465 aaKnown RBP4.29□□□□□ -1.72
SRO7YPR032W SEC65P29478 273 aa4.29□□□□□ -1.72
SRO7YPR032W RAM2P29703 316 aa4.29□□□□□ -1.72
SRO7YPR032W SRB4P32569 687 aa4.29□□□□□ -1.72
SRO7YPR032W SQT1P35184 431 aa4.29□□□□□ -1.72
SRO7YPR032W TYS1P36421 394 aaKnown RBP4.29□□□□□ -1.72
SRO7YPR032W YBR062CP38239 180 aa4.29□□□□□ -1.72
SRO7YPR032W SPP381P38282 291 aaPredicted RBP4.29□□□□□ -1.72
SRO7YPR032W TDA10P42938 290 aa4.29□□□□□ -1.72
SRO7YPR032W LAM5P43560 674 aa4.29□□□□□ -1.72
SRO7YPR032W DAS1P47005 663 aa4.29□□□□□ -1.72
SRO7YPR032W YGR054WP53235 642 aaKnown RBP4.29□□□□□ -1.72
SRO7YPR032W DCD1P06773 312 aa4.29□□□□□ -1.72
SRO7YPR032W FAR1P21268 830 aa4.29□□□□□ -1.72
SRO7YPR032W VMA4P22203 233 aaKnown RBP4.29□□□□□ -1.72
SRO7YPR032W CBF2P32504 956 aa4.29□□□□□ -1.72
SRO7YPR032W HCS1P34243 683 aa4.29□□□□□ -1.72
SRO7YPR032W RCN1P36054 211 aa4.29□□□□□ -1.72
SRO7YPR032W SPC72P39723 622 aa4.29□□□□□ -1.72
SRO7YPR032W SET2P46995 733 aaKnown RBP4.29□□□□□ -1.72
SRO7YPR032W ECL1P48235 211 aa4.29□□□□□ -1.72
SRO7YPR032W YKE2P52553 114 aa4.29□□□□□ -1.72
SRO7YPR032W ALO1P54783 526 aaKnown RBP4.29□□□□□ -1.72
SRO7YPR032W RPT6Q01939 405 aaKnown RBP4.29□□□□□ -1.72
SRO7YPR032W MUB1Q03162 620 aa4.29□□□□□ -1.72
SRO7YPR032W USA1Q03714 838 aa4.29□□□□□ -1.72
SRO7YPR032W CWC15Q03772 175 aaKnown RBP4.29□□□□□ -1.72
SRO7YPR032W SPO71Q03868 1245 aa4.29□□□□□ -1.72
SRO7YPR032W YDR179W-AQ03983 463 aa4.29□□□□□ -1.72
SRO7YPR032W ITT1Q04638 464 aa4.29□□□□□ -1.72
SRO7YPR032W YOL057WQ08225 711 aa4.29□□□□□ -1.72
SRO7YPR032W APC2Q12440 853 aa4.29□□□□□ -1.72
SRO7YPR032W ENO1P00924 437 aaKnown RBP4.28□□□□□ -1.72
SRO7YPR032W MCM3P24279 971 aaKnown RBP4.28□□□□□ -1.72
SRO7YPR032W NPL6P32832 435 aa4.28□□□□□ -1.72
SRO7YPR032W NPL4P33755 580 aa4.28□□□□□ -1.72
SRO7YPR032W UTP11P34247 250 aaPredicted RBP4.28□□□□□ -1.72
SRO7YPR032W KES1P35844 434 aaKnown RBP4.28□□□□□ -1.72
SRO7YPR032W YKR015CP36111 568 aa4.28□□□□□ -1.72
SRO7YPR032W ETP1P38748 585 aaKnown RBP4.28□□□□□ -1.72
SRO7YPR032W VTC2P43585 828 aa4.28□□□□□ -1.72
SRO7YPR032W ENT3P47160 408 aa4.28□□□□□ -1.72
SRO7YPR032W NOP15P53927 220 aaPredicted RBP4.28□□□□□ -1.72
SRO7YPR032W RAT1Q02792 1006 aaKnown RBP4.28□□□□□ -1.72
SRO7YPR032W RCF1Q03713 159 aa4.28□□□□□ -1.72
SRO7YPR032W RIO1Q12196 484 aaKnown RBP4.28□□□□□ -1.72
SRO7YPR032W REP1P03871 373 aa4.28□□□□□ -1.72
SRO7YPR032W MTF2P10849 440 aa4.28□□□□□ -1.72
SRO7YPR032W CBP3P21560 335 aa4.28□□□□□ -1.72
SRO7YPR032W HSP78P33416 811 aa4.28□□□□□ -1.72
SRO7YPR032W PTH2P34222 208 aa4.28□□□□□ -1.72
SRO7YPR032W BCD1P38772 366 aa4.28□□□□□ -1.72
SRO7YPR032W YJR008WP47085 338 aa4.28□□□□□ -1.72
SRO7YPR032W FMS1P50264 508 aa4.28□□□□□ -1.72
SRO7YPR032W MSN5P52918 1224 aa4.28□□□□□ -1.72
SRO7YPR032W MLC1P53141 149 aa4.28□□□□□ -1.72
SRO7YPR032W YNL144CP53907 740 aa4.28□□□□□ -1.72
SRO7YPR032W YNL040WP53960 456 aaPredicted RBP4.28□□□□□ -1.72
SRO7YPR032W ADE16P54113 591 aaKnown RBP4.28□□□□□ -1.72
SRO7YPR032W SWP1Q02795 286 aa4.28□□□□□ -1.72
SRO7YPR032W ALR1Q08269 859 aa4.28□□□□□ -1.72
SRO7YPR032W MRP7P12687 371 aa4.28□□□□□ -1.72
SRO7YPR032W SPO12P17123 173 aa4.28□□□□□ -1.72
SRO7YPR032W BAS1P22035 811 aa4.28□□□□□ -1.72
SRO7YPR032W HSP30P25619 332 aa4.28□□□□□ -1.72
SRO7YPR032W KIP1P28742 1111 aa4.28□□□□□ -1.72
SRO7YPR032W YET1P35723 206 aa4.28□□□□□ -1.72
SRO7YPR032W UGA2P38067 497 aa4.28□□□□□ -1.72
SRO7YPR032W YBR242WP38331 238 aa4.28□□□□□ -1.72
SRO7YPR032W CTM1P38818 585 aa4.28□□□□□ -1.72
SRO7YPR032W RTS1P38903 757 aa4.28□□□□□ -1.72
SRO7YPR032W IPL1P38991 367 aa4.28□□□□□ -1.72
SRO7YPR032W AIM21P40563 679 aa4.28□□□□□ -1.72
SRO7YPR032W YJR054WP47114 497 aa4.28□□□□□ -1.72
SRO7YPR032W BNI4P53858 892 aa4.28□□□□□ -1.72
SRO7YPR032W UTP5Q04177 643 aaKnown RBP4.28□□□□□ -1.72
SRO7YPR032W TDA5Q06417 326 aaKnown RBP4.28□□□□□ -1.72
SRO7YPR032W CLF1Q12309 687 aaPredicted RBP4.28□□□□□ -1.72
SRO7YPR032W MSB1P21339 1137 aaKnown RBP4.27□□□□□ -1.73
SRO7YPR032W DPB2P24482 689 aaPredicted RBP4.27□□□□□ -1.73
SRO7YPR032W BMH1P29311 267 aaKnown RBP4.27□□□□□ -1.73
SRO7YPR032W HIR2P32480 875 aa4.27□□□□□ -1.73
SRO7YPR032W DUR3P33413 735 aa4.27□□□□□ -1.73
SRO7YPR032W VFA1P40080 203 aa4.27□□□□□ -1.73
SRO7YPR032W DML1Q03652 475 aa4.27□□□□□ -1.73
SRO7YPR032W HCR1Q05775 265 aaKnown RBP4.27□□□□□ -1.73
SRO7YPR032W NOP12Q08208 459 aaKnown RBP4.27□□□□□ -1.73
SRO7YPR032W RPS6AP0CX37 236 aaKnown RBP4.27□□□□□ -1.73
SRO7YPR032W RPS6BP0CX38 236 aaPredicted RBP4.27□□□□□ -1.73
SRO7YPR032W THR1P17423 357 aaKnown RBP4.27□□□□□ -1.73
SRO7YPR032W REC107P21651 314 aa4.27□□□□□ -1.73
SRO7YPR032W URA1P28272 314 aaPredicted RBP4.27□□□□□ -1.73
SRO7YPR032W PYC2P32327 1180 aaKnown RBP4.27□□□□□ -1.73
SRO7YPR032W TIF4631P39935 952 aaKnown RBP4.27□□□□□ -1.73
SRO7YPR032W FCY21P40039 528 aa4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 86.9 ms