RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C UBP3Q01477 912 aaKnown RBP RIP-Chip data10.48□□□□□ -0.73 RIP-Chip
SSN3YPL042C DSE3Q08729 430 aa10.48□□□□□ -0.73
SSN3YPL042C GET3Q12154 354 aaKnown RBP10.48□□□□□ -0.73
SSN3YPL042C GLE1Q12315 538 aa10.48□□□□□ -0.73
SSN3YPL042C KNS1P32350 737 aaPredicted RBP10.47□□□□□ -0.73
SSN3YPL042C MEF2P39677 819 aa10.47□□□□□ -0.73
SSN3YPL042C LAP2Q10740 671 aa10.47□□□□□ -0.73
SSN3YPL042C DDP1Q99321 188 aaKnown RBP10.47□□□□□ -0.73
SSN3YPL042C TRS33Q99394 268 aa10.47□□□□□ -0.73
SSN3YPL042C CIT1P00890 479 aa10.47□□□□□ -0.73
SSN3YPL042C ATG19P35193 415 aa10.47□□□□□ -0.73
SSN3YPL042C RFT1P38206 574 aaPredicted RBP10.47□□□□□ -0.73
SSN3YPL042C YGL138CP53122 345 aa10.47□□□□□ -0.73
SSN3YPL042C SVF1Q05515 481 aa10.47□□□□□ -0.73
SSN3YPL042C SMD2Q06217 110 aaKnown RBP10.47□□□□□ -0.73
SSN3YPL042C ARV1Q06541 321 aa10.47□□□□□ -0.73
SSN3YPL042C CSR2Q12734 1121 aa10.47□□□□□ -0.73
SSN3YPL042C DID4P36108 232 aa10.46□□□□□ -0.74
SSN3YPL042C BIM1P40013 344 aa10.46□□□□□ -0.74
SSN3YPL042C NAF1P53919 492 aaKnown RBP10.46□□□□□ -0.74
SSN3YPL042C VMS1Q04311 632 aaKnown RBP10.46□□□□□ -0.74
SSN3YPL042C MAG2Q06436 670 aaKnown RBP10.46□□□□□ -0.74
SSN3YPL042C MYO1P08964 1928 aa10.45□□□□□ -0.74
SSN3YPL042C HXK1P04806 485 aaKnown RBP10.45□□□□□ -0.74
SSN3YPL042C GAL2P13181 574 aa10.45□□□□□ -0.74
SSN3YPL042C SAM2P19358 384 aaKnown RBP10.45□□□□□ -0.74
SSN3YPL042C PKC1P24583 1151 aa10.45□□□□□ -0.74
SSN3YPL042C TIF4631P39935 952 aaKnown RBP10.45□□□□□ -0.74
SSN3YPL042C UBP9P39967 754 aa10.45□□□□□ -0.74
SSN3YPL042C RAD17P48581 401 aa10.45□□□□□ -0.74
SSN3YPL042C PUS5Q06244 254 aa10.45□□□□□ -0.74
SSN3YPL042C YGR161W-CQ3E744 92 aa10.45□□□□□ -0.74
SSN3YPL042C STI1P15705 589 aaKnown RBP RIP-Chip data10.44□□□□□ -0.74not detected
SSN3YPL042C RGP1P16664 663 aa10.44□□□□□ -0.74
SSN3YPL042C AAD3P25612 363 aa10.44□□□□□ -0.74
SSN3YPL042C HSE1P38753 452 aa10.44□□□□□ -0.74
SSN3YPL042C VPS45P38932 577 aa10.44□□□□□ -0.74
SSN3YPL042C ACF4P47129 309 aa10.44□□□□□ -0.74
SSN3YPL042C YJR142WP47173 342 aa10.44□□□□□ -0.74
SSN3YPL042C YGR016WP53209 190 aa10.44□□□□□ -0.74
SSN3YPL042C NOB1Q08444 459 aaKnown RBP10.44□□□□□ -0.74
SSN3YPL042C SEC23P15303 768 aaKnown RBP10.44□□□□□ -0.74
SSN3YPL042C PEP12P32854 288 aa10.44□□□□□ -0.74
SSN3YPL042C CCT3P39077 534 aaKnown RBP10.44□□□□□ -0.74
SSN3YPL042C INH1P01097 85 aa10.43□□□□□ -0.74
SSN3YPL042C MPH2P0CD99 609 aa10.43□□□□□ -0.74
SSN3YPL042C MER1P16523 270 aa10.43□□□□□ -0.74
SSN3YPL042C MAK11P20484 414 aaKnown RBP10.43□□□□□ -0.74
SSN3YPL042C URA1P28272 314 aaPredicted RBP10.43□□□□□ -0.74
SSN3YPL042C ARB1P40024 610 aaKnown RBP10.43□□□□□ -0.74
SSN3YPL042C ATG1P53104 897 aa10.43□□□□□ -0.74
SSN3YPL042C HUL5P53119 910 aa10.43□□□□□ -0.74
SSN3YPL042C ATG16Q03818 150 aa10.43□□□□□ -0.74
SSN3YPL042C GIS4Q04233 774 aa10.43□□□□□ -0.74
SSN3YPL042C ERV41Q04651 352 aa10.43□□□□□ -0.74
SSN3YPL042C CSC1Q06538 782 aa10.43□□□□□ -0.74
SSN3YPL042C RKM4Q12504 494 aa10.43□□□□□ -0.74
SSN3YPL042C YDJ1P25491 409 aaKnown RBP10.42□□□□□ -0.74
SSN3YPL042C KRR1P25586 316 aaPredicted RBP10.42□□□□□ -0.74
SSN3YPL042C YEN1P40028 759 aa10.42□□□□□ -0.74
SSN3YPL042C RNH1Q04740 348 aa10.42□□□□□ -0.74
SSN3YPL042C VIP1Q06685 1146 aaKnown RBP10.42□□□□□ -0.74
SSN3YPL042C NBL1Q3E7Y6 73 aa10.42□□□□□ -0.74
SSN3YPL042C SPS1P08458 490 aa10.41□□□□□ -0.74
SSN3YPL042C PHO87P25360 923 aa10.41□□□□□ -0.74
SSN3YPL042C JNM1P36224 373 aa10.41□□□□□ -0.74
SSN3YPL042C ACA1P39970 489 aa10.41□□□□□ -0.74
SSN3YPL042C ATG32P40458 529 aa10.41□□□□□ -0.74
SSN3YPL042C YPT11P48559 417 aa10.41□□□□□ -0.74
SSN3YPL042C CUE3P53137 624 aaKnown RBP10.41□□□□□ -0.74
SSN3YPL042C HOL1P53389 586 aa10.41□□□□□ -0.74
SSN3YPL042C TIP41Q12199 356 aa10.41□□□□□ -0.74
SSN3YPL042C PTC5Q12511 572 aa10.41□□□□□ -0.74
SSN3YPL042C ERG12P07277 443 aa10.41□□□□□ -0.74
SSN3YPL042C PBS2P08018 668 aa10.41□□□□□ -0.74
SSN3YPL042C GPA1P08539 472 aa10.41□□□□□ -0.74
SSN3YPL042C MCM3P24279 971 aaKnown RBP10.41□□□□□ -0.74
SSN3YPL042C MCM4P30665 933 aaKnown RBP10.41□□□□□ -0.74
SSN3YPL042C VPH1P32563 840 aaKnown RBP10.41□□□□□ -0.74
SSN3YPL042C ETP1P38748 585 aaKnown RBP10.41□□□□□ -0.74
SSN3YPL042C YER130CP39959 443 aa10.41□□□□□ -0.74
SSN3YPL042C ASE1P50275 885 aa10.41□□□□□ -0.74
SSN3YPL042C YGR021WP53212 290 aa10.41□□□□□ -0.74
SSN3YPL042C RSC1P53236 928 aa10.41□□□□□ -0.74
SSN3YPL042C LSB1P53281 241 aa10.41□□□□□ -0.74
SSN3YPL042C CWC15Q03772 175 aaKnown RBP10.41□□□□□ -0.74
SSN3YPL042C HMI1Q12039 706 aa10.41□□□□□ -0.74
SSN3YPL042C KRS1P15180 591 aaKnown RBP10.4□□□□□ -0.74
SSN3YPL042C ALG1P16661 449 aa10.4□□□□□ -0.74
SSN3YPL042C PET123P17558 318 aa10.4□□□□□ -0.74
SSN3YPL042C HNM1P19807 563 aa10.4□□□□□ -0.74
SSN3YPL042C CAJ1P39101 391 aa10.4□□□□□ -0.74
SSN3YPL042C SOL4P53315 255 aa10.4□□□□□ -0.74
SSN3YPL042C RET3P53600 189 aa10.4□□□□□ -0.74
SSN3YPL042C PNG1Q02890 363 aa10.4□□□□□ -0.74
SSN3YPL042C SUE1Q06524 206 aa10.4□□□□□ -0.74
SSN3YPL042C UTP4Q06679 776 aaKnown RBP10.4□□□□□ -0.74
SSN3YPL042C YOR296WQ08748 1289 aa10.4□□□□□ -0.74
SSN3YPL042C YRM1Q12340 786 aa10.4□□□□□ -0.74
SSN3YPL042C RPL8AP17076 256 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 5,963 RNA–protein pairs in 83 ms