RNA–Protein interactions for RNA: YPL019C

VTC3, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC3, Length 2,508 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC3	YPL019C	HEM1	P09950	548 aa	Predicted RBP	2.87	□□□□□ -1.95
VTC3	YPL019C	SRM1	P21827	482 aa		2.87	□□□□□ -1.95
VTC3	YPL019C	MSN1	P22148	382 aa		2.87	□□□□□ -1.95
VTC3	YPL019C	SRP40	P32583	406 aa	Predicted RBP	2.87	□□□□□ -1.95
VTC3	YPL019C	TBS1	P38114	1094 aa		2.87	□□□□□ -1.95
VTC3	YPL019C	VPS27	P40343	622 aa	Known RBP	2.87	□□□□□ -1.95
VTC3	YPL019C	YGR125W	P53273	1036 aa		2.87	□□□□□ -1.95
VTC3	YPL019C	SOL4	P53315	255 aa		2.87	□□□□□ -1.95
VTC3	YPL019C	CTR9	P89105	1077 aa		2.87	□□□□□ -1.95
VTC3	YPL019C	DUS4	Q06063	367 aa		2.87	□□□□□ -1.95
VTC3	YPL019C	HIP1	P06775	603 aa		2.87	□□□□□ -1.95
VTC3	YPL019C	BCS1	P32839	456 aa		2.87	□□□□□ -1.95
VTC3	YPL019C	DUR3	P33413	735 aa		2.87	□□□□□ -1.95
VTC3	YPL019C	PTK2	P47116	818 aa	Known RBP	2.87	□□□□□ -1.95
VTC3	YPL019C	YNL011C	P53980	444 aa		2.87	□□□□□ -1.95
VTC3	YPL019C	CDC55	Q00362	526 aa		2.87	□□□□□ -1.95
VTC3	YPL019C	BUL2	Q03758	920 aa	Known RBP	2.87	□□□□□ -1.95
VTC3	YPL019C	RPC31	P17890	251 aa		2.86	□□□□□ -1.95
VTC3	YPL019C	IRE1	P32361	1115 aa		2.86	□□□□□ -1.95
VTC3	YPL019C	GCD7	P32502	381 aa	Predicted RBP	2.86	□□□□□ -1.95
VTC3	YPL019C	SCD5	P34758	872 aa		2.86	□□□□□ -1.95
VTC3	YPL019C	YNG2	P38806	282 aa	Known RBP	2.86	□□□□□ -1.95
VTC3	YPL019C	FAA3	P39002	694 aa		2.86	□□□□□ -1.95
VTC3	YPL019C	NOC2	P39744	710 aa	Known RBP	2.86	□□□□□ -1.95
VTC3	YPL019C	HXT8	P40886	569 aa		2.86	□□□□□ -1.95
VTC3	YPL019C	IOC3	P43596	787 aa		2.86	□□□□□ -1.95
VTC3	YPL019C	VPS53	P47061	822 aa		2.86	□□□□□ -1.95
VTC3	YPL019C	ALD6	P54115	500 aa	Known RBP	2.86	□□□□□ -1.95
VTC3	YPL019C	UFD2	P54860	961 aa		2.86	□□□□□ -1.95
VTC3	YPL019C	RMD1	Q03441	430 aa		2.86	□□□□□ -1.95
VTC3	YPL019C	SKG3	Q06315	1026 aa		2.86	□□□□□ -1.95
VTC3	YPL019C	UTR4	P32626	227 aa		2.86	□□□□□ -1.95
VTC3	YPL019C	QDR2	P40474	542 aa		2.86	□□□□□ -1.95
VTC3	YPL019C	ENP2	P48234	707 aa	Known RBP	2.86	□□□□□ -1.95
VTC3	YPL019C	MCM6	P53091	1017 aa	Known RBP	2.86	□□□□□ -1.95
VTC3	YPL019C	YRB30	P53107	440 aa	Predicted RBP	2.86	□□□□□ -1.95
VTC3	YPL019C	YNR014W	P53719	212 aa		2.86	□□□□□ -1.95
VTC3	YPL019C	UTP4	Q06679	776 aa	Known RBP	2.86	□□□□□ -1.95
VTC3	YPL019C	YDR034W-B	Q6Q5X2	51 aa		2.86	□□□□□ -1.95
VTC3	YPL019C	HXK1	P04806	485 aa	Known RBP	2.85	□□□□□ -1.95
VTC3	YPL019C	RAD18	P10862	487 aa		2.85	□□□□□ -1.95
VTC3	YPL019C	UGA4	P32837	571 aa		2.85	□□□□□ -1.95
VTC3	YPL019C	TIM23	P32897	222 aa		2.85	□□□□□ -1.95
VTC3	YPL019C	YHR131C	P38835	850 aa		2.85	□□□□□ -1.95
VTC3	YPL019C	RPS26A	P39938	119 aa	Known RBP	2.85	□□□□□ -1.95
VTC3	YPL019C	RPS26B	P39939	119 aa	Known RBP	2.85	□□□□□ -1.95
VTC3	YPL019C	SKP2	P42843	763 aa		2.85	□□□□□ -1.95
VTC3	YPL019C	AAD14	P42884	376 aa		2.85	□□□□□ -1.95
VTC3	YPL019C	IRC8	P47046	822 aa		2.85	□□□□□ -1.95
VTC3	YPL019C	JIP5	Q06214	492 aa	Predicted RBP	2.85	□□□□□ -1.95
VTC3	YPL019C	LAM4	P38800	1345 aa		2.85	□□□□□ -1.95
VTC3	YPL019C	CYC8	P14922	966 aa		2.85	□□□□□ -1.95
VTC3	YPL019C	GPT2	P36148	743 aa		2.85	□□□□□ -1.95
VTC3	YPL019C	MGE1	P38523	228 aa		2.85	□□□□□ -1.95
VTC3	YPL019C	PES4	P39684	611 aa		2.85	□□□□□ -1.95
VTC3	YPL019C	JHD1	P40034	492 aa		2.85	□□□□□ -1.95
VTC3	YPL019C	YGL242C	P53066	181 aa		2.85	□□□□□ -1.95
VTC3	YPL019C	SPO1	P53541	631 aa		2.85	□□□□□ -1.95
VTC3	YPL019C	SVF1	Q05515	481 aa		2.85	□□□□□ -1.95
VTC3	YPL019C	CDC45	Q08032	650 aa		2.85	□□□□□ -1.95
VTC3	YPL019C	RTP1	Q12751	981 aa		2.85	□□□□□ -1.95
VTC3	YPL019C	YDR524C-B	Q3E6R4	66 aa		2.85	□□□□□ -1.95
VTC3	YPL019C	UBR2	Q07963	1872 aa		2.85	□□□□□ -1.95
VTC3	YPL019C	AFT1	P22149	690 aa		2.84	□□□□□ -1.95
VTC3	YPL019C	MCM4	P30665	933 aa	Known RBP	2.84	□□□□□ -1.95
VTC3	YPL019C	RTS1	P38903	757 aa		2.84	□□□□□ -1.95
VTC3	YPL019C	FPR3	P38911	411 aa	Known RBP	2.84	□□□□□ -1.95
VTC3	YPL019C	NTA1	P40354	457 aa		2.84	□□□□□ -1.95
VTC3	YPL019C	RSC8	P43609	557 aa	Known RBP	2.84	□□□□□ -1.95
VTC3	YPL019C	MLC1	P53141	149 aa		2.84	□□□□□ -1.95
VTC3	YPL019C	VPS16	Q03308	798 aa		2.84	□□□□□ -1.95
VTC3	YPL019C	MRD1	Q06106	887 aa	Known RBP	2.84	□□□□□ -1.95
VTC3	YPL019C	CDC4	P07834	779 aa		2.84	□□□□□ -1.96
VTC3	YPL019C	POX1	P13711	748 aa		2.84	□□□□□ -1.96
VTC3	YPL019C	CHS3	P29465	1165 aa		2.84	□□□□□ -1.96
VTC3	YPL019C	VPS35	P34110	944 aa		2.84	□□□□□ -1.96
VTC3	YPL019C	PHO88	P38264	188 aa	Predicted RBP	2.84	□□□□□ -1.96
VTC3	YPL019C	TAT2	P38967	592 aa		2.84	□□□□□ -1.96
VTC3	YPL019C	SLN1	P39928	1220 aa	Predicted RBP	2.84	□□□□□ -1.96
VTC3	YPL019C	VID27	P40157	782 aa		2.84	□□□□□ -1.96
VTC3	YPL019C	FOL2	P51601	243 aa	Known RBP	2.84	□□□□□ -1.96
VTC3	YPL019C	MTO1	P53070	669 aa		2.84	□□□□□ -1.96
VTC3	YPL019C	DAK1	P54838	584 aa	Known RBP	2.84	□□□□□ -1.96
VTC3	YPL019C	SLD5	Q03406	294 aa		2.84	□□□□□ -1.96
VTC3	YPL019C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	2.84	□□□□□ -1.96	not detected
VTC3	YPL019C	ISA1	Q07821	250 aa	Predicted RBP	2.84	□□□□□ -1.96
VTC3	YPL019C	RAD61	Q99359	647 aa		2.84	□□□□□ -1.96
VTC3	YPL019C	SAM1	P10659	382 aa	Known RBP	2.83	□□□□□ -1.96
VTC3	YPL019C	PDC6	P26263	563 aa	Known RBP	2.83	□□□□□ -1.96
VTC3	YPL019C	YUR1	P26725	428 aa		2.83	□□□□□ -1.96
VTC3	YPL019C	TFC4	P33339	1025 aa		2.83	□□□□□ -1.96
VTC3	YPL019C	PBY1	P38254	753 aa		2.83	□□□□□ -1.96
VTC3	YPL019C	RAD55	P38953	406 aa		2.83	□□□□□ -1.96
VTC3	YPL019C	RRP8	P38961	392 aa	Known RBP	2.83	□□□□□ -1.96
VTC3	YPL019C	VPS8	P39702	1274 aa		2.83	□□□□□ -1.96
VTC3	YPL019C	PSY2	P40164	858 aa		2.83	□□□□□ -1.96
VTC3	YPL019C	YMR147W	P40218	223 aa	Known RBP	2.83	□□□□□ -1.96
VTC3	YPL019C	YIL092W	P40497	633 aa		2.83	□□□□□ -1.96
VTC3	YPL019C	EMG1	Q06287	252 aa	Known RBP	2.83	□□□□□ -1.96
VTC3	YPL019C	PDR18	P53756	1333 aa		2.83	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 32 ms