RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C YNL035CP53962 389 aaKnown RBP8.08□□□□□ -1.12
RUP1YOR138C AIM33Q04516 312 aa8.08□□□□□ -1.12
RUP1YOR138C YPR078CQ06813 372 aa8.08□□□□□ -1.12
RUP1YOR138C DAS2Q12084 232 aa8.08□□□□□ -1.12
RUP1YOR138C SMC6Q12749 1114 aa8.08□□□□□ -1.12
RUP1YOR138C ARG4P04076 463 aaPredicted RBP8.07□□□□□ -1.12
RUP1YOR138C SEC8P32855 1065 aa8.07□□□□□ -1.12
RUP1YOR138C SPP381P38282 291 aaPredicted RBP8.07□□□□□ -1.12
RUP1YOR138C MMM1P41800 426 aa8.07□□□□□ -1.12
RUP1YOR138C YFL034WP43564 1073 aa8.07□□□□□ -1.12
RUP1YOR138C PUS6P53294 404 aa8.07□□□□□ -1.12
RUP1YOR138C YGR273CP53329 174 aa8.07□□□□□ -1.12
RUP1YOR138C TOF1P53840 1238 aa8.07□□□□□ -1.12
RUP1YOR138C SIL1Q08199 421 aa8.07□□□□□ -1.12
RUP1YOR138C CDC60P26637 1090 aaKnown RBP8.07□□□□□ -1.12
RUP1YOR138C LYS4P49367 693 aaPredicted RBP8.07□□□□□ -1.12
RUP1YOR138C YDR338CQ05497 695 aa8.07□□□□□ -1.12
RUP1YOR138C CLF1Q12309 687 aaPredicted RBP8.07□□□□□ -1.12
RUP1YOR138C YEL076C-AP0CX16 216 aa8.06□□□□□ -1.12
RUP1YOR138C YLR464WP0CX17 216 aa8.06□□□□□ -1.12
RUP1YOR138C APL1P27351 700 aa8.06□□□□□ -1.12
RUP1YOR138C CHS3P29465 1165 aa8.06□□□□□ -1.12
RUP1YOR138C TDA3P38758 523 aa8.06□□□□□ -1.12
RUP1YOR138C YEL076CP39971 216 aa8.06□□□□□ -1.12
RUP1YOR138C BIM1P40013 344 aa8.06□□□□□ -1.12
RUP1YOR138C SGM1P47166 707 aa8.06□□□□□ -1.12
RUP1YOR138C DIG1Q03063 452 aaKnown RBP8.06□□□□□ -1.12
RUP1YOR138C UBX2Q04228 584 aa8.06□□□□□ -1.12
RUP1YOR138C CSR1Q06705 408 aaKnown RBP8.06□□□□□ -1.12
RUP1YOR138C ARG82P07250 355 aa8.05□□□□□ -1.12
RUP1YOR138C BDF1P35817 686 aa8.05□□□□□ -1.12
RUP1YOR138C CCT2P39076 527 aaKnown RBP8.05□□□□□ -1.12
RUP1YOR138C RPC17P47076 161 aa8.05□□□□□ -1.12
RUP1YOR138C GUP1P53154 560 aa8.05□□□□□ -1.12
RUP1YOR138C BTN2P53286 410 aa8.05□□□□□ -1.12
RUP1YOR138C UTP14Q04500 899 aaKnown RBP8.05□□□□□ -1.12
RUP1YOR138C MYO1P08964 1928 aa8.05□□□□□ -1.12
RUP1YOR138C PRP16P15938 1071 aaPredicted RBP8.05□□□□□ -1.12
RUP1YOR138C CKA2P19454 339 aa8.05□□□□□ -1.12
RUP1YOR138C OXP1P28273 1286 aa8.05□□□□□ -1.12
RUP1YOR138C GCG1P32656 232 aaKnown RBP8.05□□□□□ -1.12
RUP1YOR138C RIX1P38883 763 aaPredicted RBP8.05□□□□□ -1.12
RUP1YOR138C SET4P42948 560 aa8.05□□□□□ -1.12
RUP1YOR138C ATG36P46983 293 aa8.05□□□□□ -1.12
RUP1YOR138C KAP114P53067 1004 aa8.05□□□□□ -1.12
RUP1YOR138C VIP1Q06685 1146 aaKnown RBP8.05□□□□□ -1.12
RUP1YOR138C SCP160P06105 1222 aaKnown RBP RIP-Chip data8.04□□□□□ -1.12 RIP-Chip
RUP1YOR138C ERG11P10614 530 aa8.04□□□□□ -1.12
RUP1YOR138C RPL8AP17076 256 aaKnown RBP8.04□□□□□ -1.12
RUP1YOR138C UBC6P33296 250 aaPredicted RBP8.04□□□□□ -1.12
RUP1YOR138C PIH1P38768 344 aa8.04□□□□□ -1.12
RUP1YOR138C OXR1Q08952 273 aa8.04□□□□□ -1.12
RUP1YOR138C MAK16P10962 306 aaPredicted RBP8.03□□□□□ -1.12
RUP1YOR138C SIT4P20604 311 aa8.03□□□□□ -1.12
RUP1YOR138C SWH1P35845 1188 aa8.03□□□□□ -1.12
RUP1YOR138C VPS45P38932 577 aa8.03□□□□□ -1.12
RUP1YOR138C GAA1P39012 614 aa8.03□□□□□ -1.12
RUP1YOR138C YNL320WP42840 284 aa8.03□□□□□ -1.12
RUP1YOR138C MSN5P52918 1224 aa8.03□□□□□ -1.12
RUP1YOR138C ECI1Q05871 280 aa8.03□□□□□ -1.12
RUP1YOR138C MLH2Q07980 695 aa8.03□□□□□ -1.12
RUP1YOR138C ILV1P00927 576 aaKnown RBP8.03□□□□□ -1.12
RUP1YOR138C SRM1P21827 482 aa8.03□□□□□ -1.12
RUP1YOR138C RET1P22276 1149 aaKnown RBP8.03□□□□□ -1.12
RUP1YOR138C UBP1P25037 809 aa8.03□□□□□ -1.12
RUP1YOR138C RPS7AP26786 190 aaKnown RBP8.03□□□□□ -1.12
RUP1YOR138C ISW1P38144 1129 aa8.03□□□□□ -1.12
RUP1YOR138C UBP5P39944 805 aa8.03□□□□□ -1.12
RUP1YOR138C PGA2P53903 129 aa8.03□□□□□ -1.12
RUP1YOR138C GIR2Q03768 265 aaPredicted RBP8.03□□□□□ -1.12
RUP1YOR138C SUE1Q06524 206 aa8.03□□□□□ -1.12
RUP1YOR138C PRE8P23639 250 aa8.02□□□□□ -1.13
RUP1YOR138C TRK2P28584 889 aa8.02□□□□□ -1.13
RUP1YOR138C GLN1P32288 370 aaKnown RBP8.02□□□□□ -1.13
RUP1YOR138C PXA1P41909 870 aa8.02□□□□□ -1.13
RUP1YOR138C ZPR1P53303 486 aaKnown RBP8.02□□□□□ -1.13
RUP1YOR138C PFK1P16861 987 aaKnown RBP8.02□□□□□ -1.13
RUP1YOR138C SAM2P19358 384 aaKnown RBP8.02□□□□□ -1.13
RUP1YOR138C OAF3P36023 863 aa8.02□□□□□ -1.13
RUP1YOR138C YKL023WP36103 277 aaKnown RBP8.02□□□□□ -1.13
RUP1YOR138C HEL1P36113 551 aa8.02□□□□□ -1.13
RUP1YOR138C YSW1P38280 609 aa8.02□□□□□ -1.13
RUP1YOR138C TOS1P38288 455 aa8.02□□□□□ -1.13
RUP1YOR138C MRX1P40050 688 aa8.02□□□□□ -1.13
RUP1YOR138C NBP1P52919 319 aaPredicted RBP8.02□□□□□ -1.13
RUP1YOR138C BUL2Q03758 920 aaKnown RBP8.02□□□□□ -1.13
RUP1YOR138C HKR1P41809 1802 aa8.01□□□□□ -1.13
RUP1YOR138C PWP2P25635 923 aaKnown RBP8.01□□□□□ -1.13
RUP1YOR138C SMY1P32364 656 aaKnown RBP8.01□□□□□ -1.13
RUP1YOR138C GAS5Q08193 484 aa8.01□□□□□ -1.13
RUP1YOR138C RIO1Q12196 484 aaKnown RBP8.01□□□□□ -1.13
RUP1YOR138C ARG1P22768 420 aa8□□□□□ -1.13
RUP1YOR138C KTR2P33550 425 aa8□□□□□ -1.13
RUP1YOR138C YGR021WP53212 290 aa8□□□□□ -1.13
RUP1YOR138C JJJ1P53863 590 aa8□□□□□ -1.13
RUP1YOR138C YDL057WQ07379 328 aa8□□□□□ -1.13
RUP1YOR138C TSR1Q07381 788 aaKnown RBP8□□□□□ -1.13
RUP1YOR138C AIM41Q12032 185 aa8□□□□□ -1.13
RUP1YOR138C TUS1Q06412 1307 aa8□□□□□ -1.13
RUP1YOR138C PRP9P19736 530 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms