RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W COQ9Q05779 260 aa12.01□□□□□ -0.49
PRE6YOL038W DCS2Q12123 353 aa12.01□□□□□ -0.49
PRE6YOL038W GSY1P23337 708 aa12□□□□□ -0.49
PRE6YOL038W CSM3Q04659 317 aa12□□□□□ -0.49
PRE6YOL038W SLK19Q08581 821 aaKnown RBP12□□□□□ -0.49
PRE6YOL038W TOR2P32600 2474 aaKnown RBP11.99□□□□□ -0.49
PRE6YOL038W THR4P16120 514 aaKnown RBP11.99□□□□□ -0.49
PRE6YOL038W DID4P36108 232 aa11.99□□□□□ -0.49
PRE6YOL038W SLX1P38324 304 aa11.99□□□□□ -0.49
PRE6YOL038W ROD1Q02805 837 aa11.99□□□□□ -0.49
PRE6YOL038W MAG2Q06436 670 aaKnown RBP11.99□□□□□ -0.49
PRE6YOL038W GET3Q12154 354 aaKnown RBP11.99□□□□□ -0.49
PRE6YOL038W YGR153WP48238 217 aa11.98□□□□□ -0.49
PRE6YOL038W HSP82P02829 709 aaKnown RBP11.97□□□□□ -0.49
PRE6YOL038W UBX7P38349 436 aa11.97□□□□□ -0.49
PRE6YOL038W EAF5P39995 279 aa11.97□□□□□ -0.49
PRE6YOL038W GCV2P49095 1034 aa11.97□□□□□ -0.49
PRE6YOL038W MET13P53128 600 aa11.97□□□□□ -0.49
PRE6YOL038W PGA2P53903 129 aa11.97□□□□□ -0.49
PRE6YOL038W YNL034WP53963 612 aa11.97□□□□□ -0.49
PRE6YOL038W YNL018CP53976 612 aa11.97□□□□□ -0.49
PRE6YOL038W CEX1Q12453 761 aa11.97□□□□□ -0.49
PRE6YOL038W PTC5Q12511 572 aa11.97□□□□□ -0.49
PRE6YOL038W RNR2P09938 399 aaKnown RBP11.96□□□□□ -0.49
PRE6YOL038W YHL017WP38745 532 aa11.96□□□□□ -0.49
PRE6YOL038W BUD6P41697 788 aa11.96□□□□□ -0.49
PRE6YOL038W AVT1P47082 602 aa11.96□□□□□ -0.49
PRE6YOL038W PRC1P00729 532 aa11.95□□□□□ -0.5
PRE6YOL038W ERC1P38767 581 aa11.95□□□□□ -0.5
PRE6YOL038W TPO2P53283 614 aa11.95□□□□□ -0.5
PRE6YOL038W SKY1Q03656 742 aa11.95□□□□□ -0.5
PRE6YOL038W FAB1P34756 2278 aa11.94□□□□□ -0.5
PRE6YOL038W TUF1P02992 437 aaKnown RBP11.94□□□□□ -0.5
PRE6YOL038W SRD1P09007 221 aa11.94□□□□□ -0.5
PRE6YOL038W MSD1P15179 658 aaKnown RBP11.94□□□□□ -0.5
PRE6YOL038W STB5P38699 743 aa11.94□□□□□ -0.5
PRE6YOL038W ARK1P53974 638 aa11.94□□□□□ -0.5
PRE6YOL038W ADY4Q05955 493 aa11.94□□□□□ -0.5
PRE6YOL038W CCH1P50077 2039 aa11.94□□□□□ -0.5
PRE6YOL038W SPT2P06843 333 aaPredicted RBP11.93□□□□□ -0.5
PRE6YOL038W ADE2P21264 571 aaKnown RBP11.93□□□□□ -0.5
PRE6YOL038W PIH1P38768 344 aa11.93□□□□□ -0.5
PRE6YOL038W FAF1P40546 346 aaPredicted RBP11.93□□□□□ -0.5
PRE6YOL038W YLR455WQ06188 304 aa11.93□□□□□ -0.5
PRE6YOL038W DAP1Q12091 152 aa11.93□□□□□ -0.5
PRE6YOL038W CPA2P03965 1118 aaKnown RBP11.92□□□□□ -0.5
PRE6YOL038W YEL076C-AP0CX16 216 aa11.92□□□□□ -0.5
PRE6YOL038W YLR464WP0CX17 216 aa11.92□□□□□ -0.5
PRE6YOL038W ASF1P32447 279 aa11.92□□□□□ -0.5
PRE6YOL038W TMT1P32643 299 aa11.92□□□□□ -0.5
PRE6YOL038W YEL076CP39971 216 aa11.92□□□□□ -0.5
PRE6YOL038W SDA1P53313 767 aaKnown RBP11.92□□□□□ -0.5
PRE6YOL038W FUS2Q05670 677 aa11.92□□□□□ -0.5
PRE6YOL038W YOR296WQ08748 1289 aa11.92□□□□□ -0.5
PRE6YOL038W TIP41Q12199 356 aa11.92□□□□□ -0.5
PRE6YOL038W COX4P04037 155 aa11.91□□□□□ -0.5
PRE6YOL038W ADE4P04046 510 aaKnown RBP11.91□□□□□ -0.5
PRE6YOL038W RFS1P38234 210 aaKnown RBP11.91□□□□□ -0.5
PRE6YOL038W RFC5P38251 354 aa11.91□□□□□ -0.5
PRE6YOL038W YHL026CP38740 315 aa11.91□□□□□ -0.5
PRE6YOL038W EIS1Q05050 843 aaKnown RBP11.91□□□□□ -0.5
PRE6YOL038W YLH47Q06493 454 aa11.91□□□□□ -0.5
PRE6YOL038W NOC3Q07896 663 aaPredicted RBP11.91□□□□□ -0.5
PRE6YOL038W SMC5Q08204 1093 aa11.91□□□□□ -0.5
PRE6YOL038W SMC6Q12749 1114 aa11.91□□□□□ -0.5
PRE6YOL038W WHI2P12611 486 aa11.9□□□□□ -0.5
PRE6YOL038W IDI1P15496 288 aa11.9□□□□□ -0.5
PRE6YOL038W ADK2P26364 225 aa11.9□□□□□ -0.5
PRE6YOL038W PGM2P37012 569 aaKnown RBP11.9□□□□□ -0.5
PRE6YOL038W SPP1Q03012 353 aa11.9□□□□□ -0.5
PRE6YOL038W HEH2Q03281 663 aa11.9□□□□□ -0.5
PRE6YOL038W ELG1Q12050 791 aa11.9□□□□□ -0.5
PRE6YOL038W YPL150WQ12152 901 aa11.9□□□□□ -0.5
PRE6YOL038W HIF1Q12373 385 aa11.9□□□□□ -0.5
PRE6YOL038W PCD1Q12524 340 aa11.9□□□□□ -0.5
PRE6YOL038W ALG1P16661 449 aa11.89□□□□□ -0.51
PRE6YOL038W RPC31P17890 251 aa11.89□□□□□ -0.51
PRE6YOL038W YAP1801P38856 637 aa11.89□□□□□ -0.51
PRE6YOL038W ROG3P43602 733 aa11.89□□□□□ -0.51
PRE6YOL038W DOT1Q04089 582 aaKnown RBP11.89□□□□□ -0.51
PRE6YOL038W PSK2Q08217 1101 aa11.89□□□□□ -0.51
PRE6YOL038W RPL19AP0CX82 189 aaKnown RBP11.88□□□□□ -0.51
PRE6YOL038W RPL19BP0CX83 189 aaPredicted RBP11.88□□□□□ -0.51
PRE6YOL038W TIF1P10081 395 aaKnown RBP11.88□□□□□ -0.51
PRE6YOL038W TCP1P12612 559 aaKnown RBP11.88□□□□□ -0.51
PRE6YOL038W URA1P28272 314 aaPredicted RBP11.88□□□□□ -0.51
PRE6YOL038W PET10P36139 283 aa11.88□□□□□ -0.51
PRE6YOL038W SIP3P38717 1229 aa11.88□□□□□ -0.51
PRE6YOL038W YFL052WP43551 465 aa11.88□□□□□ -0.51
PRE6YOL038W MNP1P53163 194 aaPredicted RBP11.88□□□□□ -0.51
PRE6YOL038W CBK1P53894 756 aa11.88□□□□□ -0.51
PRE6YOL038W NCS2P53923 493 aaPredicted RBP11.88□□□□□ -0.51
PRE6YOL038W APN2P38207 520 aa11.87□□□□□ -0.51
PRE6YOL038W RPN3P40016 523 aaKnown RBP11.87□□□□□ -0.51
PRE6YOL038W FYV10P40492 516 aa11.87□□□□□ -0.51
PRE6YOL038W MGA2P40578 1113 aa11.87□□□□□ -0.51
PRE6YOL038W JJJ3P47138 172 aa11.87□□□□□ -0.51
PRE6YOL038W YNL146WP53906 100 aa11.87□□□□□ -0.51
PRE6YOL038W VPS20Q04272 221 aa11.87□□□□□ -0.51
PRE6YOL038W IES4Q08561 116 aa11.87□□□□□ -0.51
Retrieved 100 of 5,963 RNA–protein pairs in 41.8 ms