RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C YMR102CQ03177 834 aa9.4□□□□□ -0.9
RPD3YNL330C SKG3Q06315 1026 aa9.4□□□□□ -0.9
RPD3YNL330C YLH47Q06493 454 aa9.4□□□□□ -0.9
RPD3YNL330C YLR001CQ07895 862 aa9.4□□□□□ -0.9
RPD3YNL330C PAP1P29468 568 aaKnown RBP9.39□□□□□ -0.91
RPD3YNL330C SSP1P38871 571 aa9.39□□□□□ -0.91
RPD3YNL330C SAP1P39955 897 aaKnown RBP9.39□□□□□ -0.91
RPD3YNL330C SET4P42948 560 aa9.39□□□□□ -0.91
RPD3YNL330C ROG3P43602 733 aa9.39□□□□□ -0.91
RPD3YNL330C TOS3P43637 560 aa9.39□□□□□ -0.91
RPD3YNL330C SGM1P47166 707 aa9.39□□□□□ -0.91
RPD3YNL330C CWC22P53333 577 aaKnown RBP9.39□□□□□ -0.91
RPD3YNL330C BUL2Q03758 920 aaKnown RBP9.39□□□□□ -0.91
RPD3YNL330C YPR078CQ06813 372 aa9.39□□□□□ -0.91
RPD3YNL330C TUS1Q06412 1307 aa9.39□□□□□ -0.91
RPD3YNL330C YEL076C-AP0CX16 216 aa9.38□□□□□ -0.91
RPD3YNL330C YLR464WP0CX17 216 aa9.38□□□□□ -0.91
RPD3YNL330C RPS7AP26786 190 aaKnown RBP9.38□□□□□ -0.91
RPD3YNL330C ECM32P32644 1121 aaKnown RBP9.38□□□□□ -0.91
RPD3YNL330C YEL076CP39971 216 aa9.38□□□□□ -0.91
RPD3YNL330C GTT3P39996 337 aa9.38□□□□□ -0.91
RPD3YNL330C EMP47P43555 445 aa9.38□□□□□ -0.91
RPD3YNL330C LSB1P53281 241 aa9.38□□□□□ -0.91
RPD3YNL330C VTI1Q04338 217 aa9.38□□□□□ -0.91
RPD3YNL330C YMR114CQ04471 368 aaKnown RBP9.38□□□□□ -0.91
RPD3YNL330C RAD1P06777 1100 aa9.37□□□□□ -0.91
RPD3YNL330C PWP2P25635 923 aaKnown RBP9.37□□□□□ -0.91
RPD3YNL330C YKU70P32807 602 aa9.37□□□□□ -0.91
RPD3YNL330C OLA1P38219 394 aaKnown RBP9.37□□□□□ -0.91
RPD3YNL330C MED8P38304 223 aa9.37□□□□□ -0.91
RPD3YNL330C ORC6P38826 435 aa9.37□□□□□ -0.91
RPD3YNL330C ECM1P39715 212 aa9.37□□□□□ -0.91
RPD3YNL330C NUP82P40368 713 aa9.37□□□□□ -0.91
RPD3YNL330C BTN2P53286 410 aa9.37□□□□□ -0.91
RPD3YNL330C SEC5P89102 971 aa9.37□□□□□ -0.91
RPD3YNL330C STE23Q06010 1027 aa9.37□□□□□ -0.91
RPD3YNL330C SFH1Q06168 426 aa9.37□□□□□ -0.91
RPD3YNL330C TUP1P16649 713 aa9.36□□□□□ -0.91
RPD3YNL330C RAD53P22216 821 aa9.36□□□□□ -0.91
RPD3YNL330C RAM2P29703 316 aa9.36□□□□□ -0.91
RPD3YNL330C XRS2P33301 854 aa9.36□□□□□ -0.91
RPD3YNL330C NIP100P33420 868 aa9.36□□□□□ -0.91
RPD3YNL330C PPS1P38148 807 aa9.36□□□□□ -0.91
RPD3YNL330C GAA1P39012 614 aa9.36□□□□□ -0.91
RPD3YNL330C PXA1P41909 870 aa9.36□□□□□ -0.91
RPD3YNL330C YJR079WP47126 109 aa9.36□□□□□ -0.91
RPD3YNL330C TOF1P53840 1238 aa9.36□□□□□ -0.91
RPD3YNL330C MFM1Q02783 413 aa9.36□□□□□ -0.91
RPD3YNL330C TCO89Q08921 799 aa9.36□□□□□ -0.91
RPD3YNL330C YOR223WQ12015 292 aa9.36□□□□□ -0.91
RPD3YNL330C GFA1P14742 717 aaKnown RBP9.35□□□□□ -0.91
RPD3YNL330C SMC1P32908 1225 aa9.35□□□□□ -0.91
RPD3YNL330C JNM1P36224 373 aa9.35□□□□□ -0.91
RPD3YNL330C PTC4P38089 393 aa9.35□□□□□ -0.91
RPD3YNL330C SET5P38890 526 aaKnown RBP9.35□□□□□ -0.91
RPD3YNL330C YFL034WP43564 1073 aa9.35□□□□□ -0.91
RPD3YNL330C ENV11P53246 860 aa9.35□□□□□ -0.91
RPD3YNL330C AIM33Q04516 312 aa9.35□□□□□ -0.91
RPD3YNL330C TSR1Q07381 788 aaKnown RBP9.35□□□□□ -0.91
RPD3YNL330C GAS5Q08193 484 aa9.35□□□□□ -0.91
RPD3YNL330C APL5Q08951 932 aaKnown RBP9.35□□□□□ -0.91
RPD3YNL330C RRG1Q12167 365 aaPredicted RBP9.35□□□□□ -0.91
RPD3YNL330C GCG1P32656 232 aaKnown RBP9.34□□□□□ -0.91
RPD3YNL330C UBC6P33296 250 aaPredicted RBP9.34□□□□□ -0.91
RPD3YNL330C ISW1P38144 1129 aa9.34□□□□□ -0.91
RPD3YNL330C UBP9P39967 754 aa9.34□□□□□ -0.91
RPD3YNL330C BIM1P40013 344 aa9.34□□□□□ -0.91
RPD3YNL330C GUP1P53154 560 aa9.34□□□□□ -0.91
RPD3YNL330C FUS2Q05670 677 aa9.34□□□□□ -0.91
RPD3YNL330C YDL124WQ07551 312 aaKnown RBP9.34□□□□□ -0.91
RPD3YNL330C MLH2Q07980 695 aa9.34□□□□□ -0.91
RPD3YNL330C MED1Q12321 566 aa9.34□□□□□ -0.91
RPD3YNL330C KTR2P33550 425 aa9.33□□□□□ -0.92
RPD3YNL330C YKL222CP35995 705 aa9.33□□□□□ -0.92
RPD3YNL330C LAS1P36146 502 aaPredicted RBP9.33□□□□□ -0.92
RPD3YNL330C ERT1P38140 529 aa9.33□□□□□ -0.92
RPD3YNL330C CST26P38226 397 aa9.33□□□□□ -0.92
RPD3YNL330C KIC1P38692 1080 aa9.33□□□□□ -0.92
RPD3YNL330C SIP3P38717 1229 aa9.33□□□□□ -0.92
RPD3YNL330C YGR021WP53212 290 aa9.33□□□□□ -0.92
RPD3YNL330C YGR273CP53329 174 aa9.33□□□□□ -0.92
RPD3YNL330C GIR2Q03768 265 aaPredicted RBP9.33□□□□□ -0.92
RPD3YNL330C URH1Q04179 340 aa9.33□□□□□ -0.92
RPD3YNL330C SIL1Q08199 421 aa9.33□□□□□ -0.92
RPD3YNL330C RIO1Q12196 484 aaKnown RBP9.33□□□□□ -0.92
RPD3YNL330C ZRT2Q12436 422 aa9.33□□□□□ -0.92
RPD3YNL330C ILV1P00927 576 aaKnown RBP9.32□□□□□ -0.92
RPD3YNL330C KIN1P13185 1064 aa9.32□□□□□ -0.92
RPD3YNL330C PFK1P16861 987 aaKnown RBP9.32□□□□□ -0.92
RPD3YNL330C MRF1P30775 413 aaPredicted RBP9.32□□□□□ -0.92
RPD3YNL330C GLN1P32288 370 aaKnown RBP9.32□□□□□ -0.92
RPD3YNL330C SPP381P38282 291 aaPredicted RBP9.32□□□□□ -0.92
RPD3YNL330C PAN5P38787 379 aa9.32□□□□□ -0.92
RPD3YNL330C UBP5P39944 805 aa9.32□□□□□ -0.92
RPD3YNL330C SDS3P40505 327 aa9.32□□□□□ -0.92
RPD3YNL330C HXT8P40886 569 aa9.32□□□□□ -0.92
RPD3YNL330C MMM1P41800 426 aa9.32□□□□□ -0.92
RPD3YNL330C TAD1P53065 400 aa9.32□□□□□ -0.92
RPD3YNL330C KAP114P53067 1004 aa9.32□□□□□ -0.92
RPD3YNL330C VID30P53076 958 aa9.32□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms