RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C ALT1P52893 592 aa4.52□□□□□ -1.69
WHI3YNL197C TFB2Q02939 513 aa4.52□□□□□ -1.69
WHI3YNL197C HRQ1Q05549 1077 aa4.52□□□□□ -1.69
WHI3YNL197C DUS3Q06053 668 aaKnown RBP4.52□□□□□ -1.69
WHI3YNL197C ATG13Q06628 738 aa4.52□□□□□ -1.69
WHI3YNL197C YLR001CQ07895 862 aa4.52□□□□□ -1.69
WHI3YNL197C GAS5Q08193 484 aa4.52□□□□□ -1.69
WHI3YNL197C YPR071WQ12346 211 aa4.52□□□□□ -1.69
WHI3YNL197C TOM70P07213 617 aaKnown RBP4.51□□□□□ -1.69
WHI3YNL197C SNF5P18480 905 aa4.51□□□□□ -1.69
WHI3YNL197C NPP1P25353 742 aa4.51□□□□□ -1.69
WHI3YNL197C MDJ1P35191 511 aa4.51□□□□□ -1.69
WHI3YNL197C BAP2P38084 609 aa4.51□□□□□ -1.69
WHI3YNL197C EAR1Q03212 550 aa4.51□□□□□ -1.69
WHI3YNL197C RCL1Q08096 367 aaPredicted RBP4.51□□□□□ -1.69
WHI3YNL197C AAR2P32357 355 aaPredicted RBP4.5□□□□□ -1.69
WHI3YNL197C SEC26P41810 973 aaKnown RBP4.5□□□□□ -1.69
WHI3YNL197C SBE2P42223 864 aaKnown RBP4.5□□□□□ -1.69
WHI3YNL197C TY4A-JP47023 414 aa4.5□□□□□ -1.69
WHI3YNL197C YJR008WP47085 338 aa4.5□□□□□ -1.69
WHI3YNL197C ACM1Q08981 209 aa4.5□□□□□ -1.69
WHI3YNL197C YSC84P32793 468 aa4.49□□□□□ -1.69
WHI3YNL197C DOM34P33309 386 aa4.49□□□□□ -1.69
WHI3YNL197C TOK1P40310 691 aa4.49□□□□□ -1.69
WHI3YNL197C MTC3P53077 123 aa4.49□□□□□ -1.69
WHI3YNL197C BUD9P53226 547 aa4.49□□□□□ -1.69
WHI3YNL197C TPO2P53283 614 aa4.49□□□□□ -1.69
WHI3YNL197C YNL193WP53870 558 aa4.49□□□□□ -1.69
WHI3YNL197C LCD1Q04377 747 aa4.49□□□□□ -1.69
WHI3YNL197C PUS7Q08647 676 aaKnown RBP4.49□□□□□ -1.69
WHI3YNL197C PPH3P32345 308 aa4.49□□□□□ -1.69
WHI3YNL197C UGA2P38067 497 aa4.49□□□□□ -1.69
WHI3YNL197C GEM1P39722 662 aa4.49□□□□□ -1.69
WHI3YNL197C NPP2P39997 493 aa4.49□□□□□ -1.69
WHI3YNL197C GPG1P53130 126 aa4.49□□□□□ -1.69
WHI3YNL197C HRK1Q08732 759 aaKnown RBP4.49□□□□□ -1.69
WHI3YNL197C VBA3P25594 458 aa4.48□□□□□ -1.69
WHI3YNL197C SPC29P33419 253 aa4.48□□□□□ -1.69
WHI3YNL197C ENP1P38333 483 aaKnown RBP4.48□□□□□ -1.69
WHI3YNL197C PAF1P38351 445 aa4.48□□□□□ -1.69
WHI3YNL197C TSL1P38427 1098 aaKnown RBP4.48□□□□□ -1.69
WHI3YNL197C YFL066CP43538 392 aa4.48□□□□□ -1.69
WHI3YNL197C GYP8P43570 497 aa4.48□□□□□ -1.69
WHI3YNL197C ALG2P43636 503 aa4.48□□□□□ -1.69
WHI3YNL197C HOS3Q02959 697 aaKnown RBP4.48□□□□□ -1.69
WHI3YNL197C AI3P03877 415 aa4.47□□□□□ -1.69
WHI3YNL197C PRO1P32264 428 aa4.47□□□□□ -1.69
WHI3YNL197C SFA1P32771 386 aa4.47□□□□□ -1.69
WHI3YNL197C YRO2P38079 344 aa4.47□□□□□ -1.69
WHI3YNL197C BOI2P39969 1040 aa4.47□□□□□ -1.69
WHI3YNL197C TPP1Q03796 238 aa4.47□□□□□ -1.69
WHI3YNL197C BI4P03879 638 aa4.47□□□□□ -1.69
WHI3YNL197C CDC9P04819 755 aa4.47□□□□□ -1.69
WHI3YNL197C RPS4AP0CX35 261 aaKnown RBP4.47□□□□□ -1.69
WHI3YNL197C RPS4BP0CX36 261 aaKnown RBP4.47□□□□□ -1.69
WHI3YNL197C SAM35P14693 329 aa4.47□□□□□ -1.69
WHI3YNL197C SFP1P32432 683 aa4.47□□□□□ -1.69
WHI3YNL197C ADE8P04161 214 aa4.46□□□□□ -1.7
WHI3YNL197C RAD53P22216 821 aa4.46□□□□□ -1.7
WHI3YNL197C YKE2P52553 114 aa4.46□□□□□ -1.7
WHI3YNL197C NSG2P53898 299 aa4.46□□□□□ -1.7
WHI3YNL197C SRP1Q02821 542 aaKnown RBP4.46□□□□□ -1.7
WHI3YNL197C MDM38Q08179 573 aa4.46□□□□□ -1.7
WHI3YNL197C YLL058WQ12198 575 aa4.46□□□□□ -1.7
WHI3YNL197C PHR1P05066 565 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
WHI3YNL197C SRD1P09007 221 aa4.45□□□□□ -1.7
WHI3YNL197C PCL2P25693 308 aa4.45□□□□□ -1.7
WHI3YNL197C DSS1P39112 969 aa4.45□□□□□ -1.7
WHI3YNL197C MGS1P40151 587 aa4.45□□□□□ -1.7
WHI3YNL197C YGR283CP53336 341 aaPredicted RBP4.45□□□□□ -1.7
WHI3YNL197C THI73Q07904 523 aa4.45□□□□□ -1.7
WHI3YNL197C REC104P33323 182 aa4.45□□□□□ -1.7
WHI3YNL197C MTC2P34246 357 aa4.45□□□□□ -1.7
WHI3YNL197C GIC1P38785 314 aa4.45□□□□□ -1.7
WHI3YNL197C SAH1P39954 449 aaKnown RBP4.45□□□□□ -1.7
WHI3YNL197C YGR237CP50089 785 aa4.45□□□□□ -1.7
WHI3YNL197C TNA1P53322 534 aa4.45□□□□□ -1.7
WHI3YNL197C YNR014WP53719 212 aa4.45□□□□□ -1.7
WHI3YNL197C ENV7Q12003 364 aa4.45□□□□□ -1.7
WHI3YNL197C YVC1Q12324 675 aa4.45□□□□□ -1.7
WHI3YNL197C AI1P03875 834 aa4.44□□□□□ -1.7
WHI3YNL197C YBR238CP38330 731 aaKnown RBP4.44□□□□□ -1.7
WHI3YNL197C HLJ1P48353 224 aa4.44□□□□□ -1.7
WHI3YNL197C GYP7P48365 746 aa4.44□□□□□ -1.7
WHI3YNL197C FOL1P53848 824 aa4.44□□□□□ -1.7
WHI3YNL197C ATP25Q03153 612 aa4.44□□□□□ -1.7
WHI3YNL197C SRT1Q03175 343 aa4.44□□□□□ -1.7
WHI3YNL197C EMC3P36039 253 aa4.44□□□□□ -1.7
WHI3YNL197C YKR078WP36158 585 aaKnown RBP4.44□□□□□ -1.7
WHI3YNL197C MCX1P38323 520 aaPredicted RBP4.44□□□□□ -1.7
WHI3YNL197C PMT3P47190 753 aa4.44□□□□□ -1.7
WHI3YNL197C CCM1P48237 864 aaPredicted RBP4.44□□□□□ -1.7
WHI3YNL197C ARI1P53111 347 aaKnown RBP4.44□□□□□ -1.7
WHI3YNL197C TDA6Q06466 467 aa4.44□□□□□ -1.7
WHI3YNL197C ACE2P21192 770 aa4.43□□□□□ -1.7
WHI3YNL197C SSD1P24276 1250 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
WHI3YNL197C MRC1P25588 1096 aa4.43□□□□□ -1.7
WHI3YNL197C PIK1P39104 1066 aa4.43□□□□□ -1.7
WHI3YNL197C YJR120WP47157 116 aa4.43□□□□□ -1.7
WHI3YNL197C SDA1P53313 767 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms